RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 TBC1D8BQ0IIM8 1120 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 ITGB3BPQ13352 177 aaPredicted RBP11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 LRRC41Q15345 812 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 BMT2Q1RMZ1 405 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 ZNF746Q6NUN9 644 aaPredicted RBP11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 SFR1Q86XK3 245 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 RIOX2Q8IUF8 465 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 PIGOQ8TEQ8 1089 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 SCFD1Q8WVM8 642 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 OTUD5Q96G74 571 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 CCDC43Q96MW1 224 aaKnown RBP11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 INPP4AQ96PE3 977 aaPredicted RBP11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 SENP7Q9BQF6 1050 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 TAF1DQ9H5J8 278 aaPredicted RBP11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 MRPL44Q9H9J2 332 aaKnown RBP11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 PARVGQ9HBI0 331 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 A1CFQ9NQ94 594 aaKnown RBP11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 TRAF3IP3Q9Y228 551 aa11.68□□□□□ -0.54
VIPAS39-203ENST00000448935 NFASCO94856 1347 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 PDXKO00764 312 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 CETN3O15182 167 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 SLC25A27O95847 323 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 GYPCP04921 128 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 TNNT1P13805 278 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 RPL13P26373 211 aaKnown RBP11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 CASP14P31944 242 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 MARSP56192 900 aaKnown RBP11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 PSMC5P62195 406 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 PPP2R3AQ06190 1150 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 KNOP1Q1ED39 458 aaKnown RBP11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 CCDC40Q4G0X9 1142 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 VWA3BQ502W6 1294 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 FIGNQ5HY92 759 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 E4F1Q66K89 784 aaPredicted RBP11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 LRRC55Q6ZSA7 311 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 EPM2AIP1Q7L775 607 aaPredicted RBP11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 TMTC1Q8IUR5 882 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 TMEM139Q8IV31 216 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 C4orf19Q8IY42 314 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 SMAP1Q8IYB5 467 aaPredicted RBP11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 ANKRD35Q8N283 1001 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 CPLX3Q8WVH0 158 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 C16orf45Q96MC5 204 aaPredicted RBP11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 ERGIC2Q96RQ1 377 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 MPHOSPH6Q99547 160 aaKnown RBP11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 RUSC1Q9BVN2 902 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 KCTD10Q9H3F6 313 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 TBC1D7Q9P0N9 293 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 FAM184BQ9ULE4 1060 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 AGTPBP1Q9UPW5 1226 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 PAXBP1Q9Y5B6 917 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 PCDHGA10Q9Y5H3 936 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 MYH11P35749 1972 aa11.67□□□□□ -0.54
VIPAS39-203ENST00000448935 KIAA1217Q5T5P2 1943 aa11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 ZNF131P52739 623 aa11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 ALCAMQ13740 583 aa11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 STXBP2Q15833 593 aa11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 PTPN21Q16825 1174 aa11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 EAPPQ56P03 285 aaPredicted RBP11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 TREML2Q5T2D2 321 aa11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 NYAP1Q6ZVC0 841 aa11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 NELFCDQ8IXH7 590 aa11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 ZC3H3Q8IXZ2 948 aaKnown RBP11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 MYCT1Q8N699 235 aa11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 BANK1Q8NDB2 785 aa11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 ZNF397Q8NF99 534 aaPredicted RBP11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 GTF3C2Q8WUA4 911 aaPredicted RBP11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 NDST4Q9H3R1 872 aa11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 ABHD10Q9NUJ1 306 aa11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 TYW1Q9NV66 732 aaKnown RBP11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 PKD2L1Q9P0L9 805 aa11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 CAPN11Q9UMQ6 739 aa11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 LUC7L2Q9Y383 392 aaKnown RBP11.66□□□□□ -0.54
VIPAS39-203ENST00000448935 EIF3JO75822 258 aaKnown RBP11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 GCNT3O95395 438 aa11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 MAPTP10636 758 aaKnown RBP11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 TRIM21P19474 475 aaKnown RBP11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 KRT9P35527 623 aa11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 ADAM9Q13443 819 aa11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 NFIL3Q16649 462 aa11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 MIIPQ5JXC2 388 aa11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 CEP135Q66GS9 1140 aa11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 CYP26C1Q6V0L0 522 aa11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 SLC17A8Q8NDX2 589 aa11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 GLIS3Q8NEA6 775 aa11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 OR8K1Q8NGG5 319 aa11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 PPP1R13BQ96KQ4 1090 aa11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 MOV10L1Q9BXT6 1211 aaKnown RBP11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 SPATC1LQ9H0A9 340 aa11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 ANKEF1Q9NU02 776 aa11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 TRMT1Q9NXH9 659 aaKnown RBP11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 LARSQ9P2J5 1176 aaKnown RBP11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 PCDHA10Q9Y5I2 948 aa11.65□□□□□ -0.54
VIPAS39-203ENST00000448935 A0A1W2PQJ5 194 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 FXR1P51114 621 aaKnown RBP eCLIP11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 HERVK_113P62684 666 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 GOLGA8FQ08AF8 430 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 GOLGA8DPQ0D2H9 430 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 PADI6Q6TGC4 694 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 OTUD6AQ7L8S5 288 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms