RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 TECP42680 631 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 BTDP43251 543 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 PSEN1P49768 467 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 USP11P51784 963 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 EIF3BP55884 814 aaKnown RBP9.19□□□□□ -0.94
CPSF7-206ENST00000448745 GSTO1P78417 241 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 TFAP4Q01664 338 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 EHHADHQ08426 723 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 KLHL30Q0D2K2 578 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 KCNMA1Q12791 1236 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 GRB10Q13322 594 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 RAPGEF1Q13905 1077 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 NBPF9Q3BBW0 867 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 FAM83BQ5T0W9 1011 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 CYB5D1Q6P9G0 228 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 ZNF713Q8N859 430 aaPredicted RBP9.19□□□□□ -0.94
CPSF7-206ENST00000448745 CCDC26Q8TAB7 109 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 SCFD2Q8WU76 684 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 LMBR1Q8WVP7 490 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 TEKT1Q969V4 418 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 CENPTQ96BT3 561 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 SEC16BQ96JE7 1060 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 MMTAG2Q9BU76 263 aaKnown RBP9.19□□□□□ -0.94
CPSF7-206ENST00000448745 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.19□□□□□ -0.94
CPSF7-206ENST00000448745 FAM114A2Q9NRY5 505 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 BLOC1S4Q9NUP1 217 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 GPRC5DQ9NZD1 345 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 AIPL1Q9NZN9 384 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 SLC12A6Q9UHW9 1150 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 NFS1Q9Y697 457 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 BZW2Q9Y6E2 419 aaKnown RBP9.19□□□□□ -0.94
CPSF7-206ENST00000448745 GJA3Q9Y6H8 435 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 WDR90Q96KV7 1748 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 ESYT2A0FGR8 921 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 GLTPD2A6NH11 291 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 SPDYE2BA6NHP3 402 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 KCNK3O14649 394 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 LDHCP07864 332 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 GSTA1P08263 222 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 SPDYE6P0CI01 402 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 GCFC2P16383 781 aaKnown RBP9.19□□□□□ -0.94
CPSF7-206ENST00000448745 SMARCA1P28370 1054 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 EPS15P42566 896 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 DNA2P51530 1060 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 MRPL12P52815 198 aaKnown RBP9.19□□□□□ -0.94
CPSF7-206ENST00000448745 MARSP56192 900 aaKnown RBP9.19□□□□□ -0.94
CPSF7-206ENST00000448745 XRCC4Q13426 336 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 CALCRLQ16602 461 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 KIAA0753Q2KHM9 967 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 ODF2Q5BJF6 829 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 CDC42EP5Q6NZY7 148 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 HOOK3Q86VS8 718 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 MICALL2Q8IY33 904 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 FUKQ8N0W3 1084 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 SH3RF3Q8TEJ3 882 aaPredicted RBP9.19□□□□□ -0.94
CPSF7-206ENST00000448745 UBLCP1Q8WVY7 318 aaPredicted RBP9.19□□□□□ -0.94
CPSF7-206ENST00000448745 TBC1D5Q92609 795 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 TATDN2Q93075 761 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 HPS3Q969F9 1004 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 PNMA5Q96PV4 448 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.19□□□□□ -0.941e-8■■■■□ 23.6
CPSF7-206ENST00000448745 ATP6V0A4Q9HBG4 840 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 NLRC4Q9NPP4 1024 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 SEC63Q9UGP8 760 aaKnown RBP9.19□□□□□ -0.94
CPSF7-206ENST00000448745 CNOT7Q9UIV1 285 aaKnown RBP9.19□□□□□ -0.94
CPSF7-206ENST00000448745 SCN4AP35499 1836 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 POLR2AP24928 1970 aaKnown RBP9.18□□□□□ -0.94
CPSF7-206ENST00000448745 SMCO2A6NFE2 343 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 WNT10BO00744 389 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 CLGNO14967 610 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 SLC26A4O43511 780 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 CEP104O60308 925 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 TLR2O60603 784 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 NOL4O94818 638 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 ECHS1P30084 290 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 SCTRP47872 440 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 HIRAP54198 1017 aaPredicted RBP9.18□□□□□ -0.94
CPSF7-206ENST00000448745 POLR2FP61218 127 aaKnown RBP9.18□□□□□ -0.94
CPSF7-206ENST00000448745 ATP2B2Q01814 1243 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 UAP1Q16222 522 aaPredicted RBP9.18□□□□□ -0.94
CPSF7-206ENST00000448745 PPP2R5EQ16537 467 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 TMEM119Q4V9L6 283 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 KRT79Q5XKE5 535 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 SAMD7Q7Z3H4 446 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 CROCCP2Q86T23 111 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 SYCE1Q8N0S2 351 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 RAPGEF5Q92565 580 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 N4BP2L2Q92802 583 aaPredicted RBP9.18□□□□□ -0.94
CPSF7-206ENST00000448745 HVCN1Q96D96 273 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 FAM129AQ9BZQ8 928 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 MYOZ2Q9NPC6 264 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 FBXL5Q9UKA1 691 aa9.18□□□□□ -0.94
CPSF7-206ENST00000448745 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.18□□□□□ -0.94
CPSF7-206ENST00000448745 A0A1B0GUA9 196 aa9.17□□□□□ -0.94
CPSF7-206ENST00000448745 TRAF5O00463 557 aa9.17□□□□□ -0.94
CPSF7-206ENST00000448745 NKRFO15226 690 aaKnown RBP eCLIP9.17□□□□□ -0.94
CPSF7-206ENST00000448745 TSPY3P0CV98 308 aa9.17□□□□□ -0.94
CPSF7-206ENST00000448745 TSPY8P0CW00 308 aa9.17□□□□□ -0.94
CPSF7-206ENST00000448745 ERCC3P19447 782 aa9.17□□□□□ -0.94
CPSF7-206ENST00000448745 NFIAQ12857 509 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms