RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 ME3Q16798 604 aa14.19□□□□□ -0.14
SSR4-205ENST00000447375 PCNX4Q63HM2 1172 aa14.19□□□□□ -0.14
SSR4-205ENST00000447375 TRIM22Q8IYM9 498 aa14.19□□□□□ -0.14
SSR4-205ENST00000447375 KREMEN2Q8NCW0 462 aa14.19□□□□□ -0.14
SSR4-205ENST00000447375 C16orf70Q9BSU1 422 aa14.19□□□□□ -0.14
SSR4-205ENST00000447375 ZMYND12Q9H0C1 365 aa14.19□□□□□ -0.14
SSR4-205ENST00000447375 UPF2Q9HAU5 1272 aaKnown RBP14.19□□□□□ -0.14
SSR4-205ENST00000447375 LOXHD1Q8IVV2 1947 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 SPDYE3A6NKU9 549 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 ENPP3O14638 875 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 SORBS3O60504 671 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 CDKL5O76039 1030 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 FOSP01100 380 aaPredicted RBP14.18□□□□□ -0.14
SSR4-205ENST00000447375 SMIM10L2AP0DMW4 78 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 SMIM10L2BP0DMW5 78 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 TGFB3P10600 412 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 HOXC8P31273 242 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 CLK2P49760 499 aaKnown RBP14.18□□□□□ -0.14
SSR4-205ENST00000447375 ADCY7P51828 1080 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 MYSM1Q5VVJ2 828 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 ASTLQ6HA08 431 aaPredicted RBP14.18□□□□□ -0.14
SSR4-205ENST00000447375 KCNV1Q6PIU1 500 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 UBALD2Q8IYN6 164 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 KLHL23Q8NBE8 558 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 CCDC12Q8WUD4 166 aaPredicted RBP14.18□□□□□ -0.14
SSR4-205ENST00000447375 POF1BQ8WVV4 589 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 SPATA33Q96N06 139 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 INPP4AQ96PE3 977 aaPredicted RBP14.18□□□□□ -0.14
SSR4-205ENST00000447375 RNPEPQ9H4A4 650 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 SH3GLB2Q9NR46 395 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 PCDHA6Q9UN73 950 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 PCDHA8Q9Y5H6 950 aa14.18□□□□□ -0.14
SSR4-205ENST00000447375 FAM186AA6NE01 2351 aa14.17□□□□□ -0.14
SSR4-205ENST00000447375 RIF1Q5UIP0 2472 aaKnown RBP14.17□□□□□ -0.14
SSR4-205ENST00000447375 PER2O15055 1255 aa14.17□□□□□ -0.14
SSR4-205ENST00000447375 DGKIO75912 1065 aa14.17□□□□□ -0.14
SSR4-205ENST00000447375 DEXIO95424 95 aa14.17□□□□□ -0.14
SSR4-205ENST00000447375 HSDL1Q3SXM5 330 aa14.17□□□□□ -0.14
SSR4-205ENST00000447375 FAM26DQ5JW98 314 aa14.17□□□□□ -0.14
SSR4-205ENST00000447375 CELF3Q5SZQ8 465 aaKnown RBP14.17□□□□□ -0.14
SSR4-205ENST00000447375 NECAB1Q8N987 351 aa14.17□□□□□ -0.14
SSR4-205ENST00000447375 MICAL1Q8TDZ2 1067 aa14.17□□□□□ -0.14
SSR4-205ENST00000447375 CNTNAP3BQ96NU0 1288 aa14.17□□□□□ -0.14
SSR4-205ENST00000447375 BACH2Q9BYV9 841 aa14.17□□□□□ -0.14
SSR4-205ENST00000447375 CNTNAP3Q9BZ76 1288 aa14.17□□□□□ -0.14
SSR4-205ENST00000447375 C6orf50Q9HD87 102 aa14.17□□□□□ -0.14
SSR4-205ENST00000447375 LIMCH1Q9UPQ0 1083 aa14.17□□□□□ -0.14
SSR4-205ENST00000447375 MRPL42Q9Y6G3 142 aaKnown RBP14.17□□□□□ -0.14
SSR4-205ENST00000447375 SPATA31C2B4DYI2 1134 aa14.16□□□□□ -0.14
SSR4-205ENST00000447375 H3BRB1 525 aa14.16□□□□□ -0.14
SSR4-205ENST00000447375 LARGE1O95461 756 aa14.16□□□□□ -0.14
SSR4-205ENST00000447375 CTDNEP1O95476 244 aa14.16□□□□□ -0.14
SSR4-205ENST00000447375 SP100P23497 879 aaPredicted RBP14.16□□□□□ -0.14
SSR4-205ENST00000447375 GNA11P29992 359 aa14.16□□□□□ -0.14
SSR4-205ENST00000447375 RBM10P98175 930 aaKnown RBP14.16□□□□□ -0.14
SSR4-205ENST00000447375 MTMR3Q13615 1198 aa14.16□□□□□ -0.14
SSR4-205ENST00000447375 FAM177A1Q8N128 213 aaPredicted RBP14.16□□□□□ -0.14
SSR4-205ENST00000447375 ATP8B4Q8TF62 1192 aa14.16□□□□□ -0.14
SSR4-205ENST00000447375 GTF3C6Q969F1 213 aa14.16□□□□□ -0.14
SSR4-205ENST00000447375 ZFP91Q96JP5 570 aaPredicted RBP14.16□□□□□ -0.14
SSR4-205ENST00000447375 TBC1D32Q96NH3 1257 aa14.16□□□□□ -0.14
SSR4-205ENST00000447375 TUT1Q9H6E5 874 aaKnown RBP14.16□□□□□ -0.14
SSR4-205ENST00000447375 EHMT1Q9H9B1 1298 aa14.16□□□□□ -0.14
SSR4-205ENST00000447375 RTEL1Q9NZ71 1219 aa14.16□□□□□ -0.14
SSR4-205ENST00000447375 VPS54Q9P1Q0 977 aa14.16□□□□□ -0.14
SSR4-205ENST00000447375 PCDHGC5Q9Y5F6 944 aa14.16□□□□□ -0.14
SSR4-205ENST00000447375 ADAMTS3O15072 1205 aa14.15□□□□□ -0.14
SSR4-205ENST00000447375 BRD1O95696 1058 aa14.15□□□□□ -0.14
SSR4-205ENST00000447375 GHRP10912 638 aa14.15□□□□□ -0.14
SSR4-205ENST00000447375 GNAT1P11488 350 aa14.15□□□□□ -0.14
SSR4-205ENST00000447375 CLCN5P51795 746 aa14.15□□□□□ -0.14
SSR4-205ENST00000447375 SP2Q02086 613 aa14.15□□□□□ -0.14
SSR4-205ENST00000447375 AP3B2Q13367 1082 aa14.15□□□□□ -0.14
SSR4-205ENST00000447375 PUM1Q14671 1186 aaKnown RBP eCLIP14.15□□□□□ -0.14
SSR4-205ENST00000447375 RABEP1Q15276 862 aa14.15□□□□□ -0.14
SSR4-205ENST00000447375 GNPTABQ3T906 1256 aa14.15□□□□□ -0.14
SSR4-205ENST00000447375 CCDC148Q8NFR7 591 aa14.15□□□□□ -0.14
SSR4-205ENST00000447375 VN1R2Q8NFZ6 395 aa14.15□□□□□ -0.14
SSR4-205ENST00000447375 BICD2Q8TD16 824 aa14.15□□□□□ -0.14
SSR4-205ENST00000447375 SETD4Q9NVD3 440 aa14.15□□□□□ -0.14
SSR4-205ENST00000447375 TMEM260Q9NX78 707 aa14.15□□□□□ -0.14
SSR4-205ENST00000447375 SORCS3Q9UPU3 1222 aa14.15□□□□□ -0.14
SSR4-205ENST00000447375 UBIAD1Q9Y5Z9 338 aa14.15□□□□□ -0.14
SSR4-205ENST00000447375 DNAH14Q0VDD8 3507 aa14.15□□□□□ -0.14
SSR4-205ENST00000447375 STK36Q9NRP7 1315 aa14.15□□□□□ -0.15
SSR4-205ENST00000447375 FIBPO43427 364 aa14.14□□□□□ -0.15
SSR4-205ENST00000447375 GGPS1O95749 300 aa14.14□□□□□ -0.15
SSR4-205ENST00000447375 CHRNA1P02708 482 aa14.14□□□□□ -0.15
SSR4-205ENST00000447375 ITGB5P18084 799 aa14.14□□□□□ -0.15
SSR4-205ENST00000447375 SREBF1P36956 1147 aa14.14□□□□□ -0.15
SSR4-205ENST00000447375 SEMA3FQ13275 785 aa14.14□□□□□ -0.15
SSR4-205ENST00000447375 NLRX1Q86UT6 975 aa14.14□□□□□ -0.15
SSR4-205ENST00000447375 CMTR2Q8IYT2 770 aaKnown RBP14.14□□□□□ -0.15
SSR4-205ENST00000447375 REXO1Q8N1G1 1221 aaKnown RBP14.14□□□□□ -0.15
SSR4-205ENST00000447375 KCNG4Q8TDN1 519 aa14.14□□□□□ -0.15
SSR4-205ENST00000447375 CRYGNQ8WXF5 182 aa14.14□□□□□ -0.15
SSR4-205ENST00000447375 ZSCAN31Q96LW9 406 aaPredicted RBP14.14□□□□□ -0.15
SSR4-205ENST00000447375 AIFM3Q96NN9 605 aa14.14□□□□□ -0.15
SSR4-205ENST00000447375 ANO3Q9BYT9 981 aa14.14□□□□□ -0.15
SSR4-205ENST00000447375 S1PR5Q9H228 398 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms