RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 MRFAP1Q9Y605 127 aa19.2■□□□□ 0.66
SMC6-206ENST00000446852 ARID2Q68CP9 1835 aa19.2■□□□□ 0.66
SMC6-206ENST00000446852 TMEM150BA6NC51 233 aa19.2■□□□□ 0.66
SMC6-206ENST00000446852 EIF3CLB5ME19 914 aaKnown RBP19.2■□□□□ 0.66
SMC6-206ENST00000446852 RARRES1P49788 294 aa19.2■□□□□ 0.66
SMC6-206ENST00000446852 TREML2Q5T2D2 321 aa19.2■□□□□ 0.66
SMC6-206ENST00000446852 XRRA1Q6P2D8 792 aa19.2■□□□□ 0.66
SMC6-206ENST00000446852 SLC35F6Q8N357 371 aa19.2■□□□□ 0.66
SMC6-206ENST00000446852 EIF3CQ99613 913 aaKnown RBP19.2■□□□□ 0.66
SMC6-206ENST00000446852 LSM14BQ9BX40 385 aaKnown RBP19.2■□□□□ 0.66
SMC6-206ENST00000446852 DBR1Q9UK59 544 aaKnown RBP19.2■□□□□ 0.66
SMC6-206ENST00000446852 RGS20O76081 388 aa19.19■□□□□ 0.66
SMC6-206ENST00000446852 LYPLA2O95372 231 aa19.19■□□□□ 0.66
SMC6-206ENST00000446852 PLS1Q14651 629 aa19.19■□□□□ 0.66
SMC6-206ENST00000446852 ELF2Q15723 593 aa19.19■□□□□ 0.66
SMC6-206ENST00000446852 PDXDC1Q6P996 788 aa19.19■□□□□ 0.66
SMC6-206ENST00000446852 SH2D3AQ9BRG2 576 aa19.19■□□□□ 0.66
SMC6-206ENST00000446852 CARD6Q9BX69 1037 aa19.19■□□□□ 0.66
SMC6-206ENST00000446852 EDEM3Q9BZQ6 932 aa19.19■□□□□ 0.66
SMC6-206ENST00000446852 ACAD9Q9H845 621 aa19.19■□□□□ 0.66
SMC6-206ENST00000446852 HOXC10Q9NYD6 342 aa19.19■□□□□ 0.66
SMC6-206ENST00000446852 MYPNQ86TC9 1320 aa19.19■□□□□ 0.66
SMC6-206ENST00000446852 ZNF263O14978 683 aa19.19■□□□□ 0.66
SMC6-206ENST00000446852 YBX3P16989 372 aaKnown RBP eCLIP19.19■□□□□ 0.661e-6■■■■□ 21.3
SMC6-206ENST00000446852 MAEAQ7L5Y9 396 aa19.19■□□□□ 0.66
SMC6-206ENST00000446852 CACNA2D4Q7Z3S7 1137 aa19.19■□□□□ 0.66
SMC6-206ENST00000446852 NSUN6Q8TEA1 469 aaKnown RBP19.19■□□□□ 0.66
SMC6-206ENST00000446852 INPP4AQ96PE3 977 aaPredicted RBP19.19■□□□□ 0.66
SMC6-206ENST00000446852 NLRC4Q9NPP4 1024 aa19.19■□□□□ 0.66
SMC6-206ENST00000446852 CEP72Q9P209 647 aa19.19■□□□□ 0.66
SMC6-206ENST00000446852 RCCD1A6NED2 376 aa19.18■□□□□ 0.66
SMC6-206ENST00000446852 SLC16A3O15427 465 aaKnown RBP19.18■□□□□ 0.66
SMC6-206ENST00000446852 RPL13P26373 211 aaKnown RBP19.18■□□□□ 0.66
SMC6-206ENST00000446852 YWHABP31946 246 aaKnown RBP19.18■□□□□ 0.66
SMC6-206ENST00000446852 KRT83P78385 493 aa19.18■□□□□ 0.66
SMC6-206ENST00000446852 CYP27A1Q02318 531 aa19.18■□□□□ 0.66
SMC6-206ENST00000446852 RBM46Q8TBY0 533 aaKnown RBP19.18■□□□□ 0.66
SMC6-206ENST00000446852 DCPSQ96C86 337 aaKnown RBP19.18■□□□□ 0.66
SMC6-206ENST00000446852 GPRASP2Q96D09 838 aa19.18■□□□□ 0.66
SMC6-206ENST00000446852 STRA6Q9BX79 667 aa19.18■□□□□ 0.66
SMC6-206ENST00000446852 GUCA1BQ9UMX6 200 aa19.18■□□□□ 0.66
SMC6-206ENST00000446852 UBE4BO95155 1302 aa19.18■□□□□ 0.66
SMC6-206ENST00000446852 WDR64B1ANS9 1081 aa19.18■□□□□ 0.66
SMC6-206ENST00000446852 PEX10O60683 326 aa19.18■□□□□ 0.66
SMC6-206ENST00000446852 PPP1R37O75864 691 aa19.18■□□□□ 0.66
SMC6-206ENST00000446852 JAK3P52333 1124 aa19.18■□□□□ 0.66
SMC6-206ENST00000446852 KRT76Q01546 638 aa19.18■□□□□ 0.66
SMC6-206ENST00000446852 ERCC6LQ2NKX8 1250 aa19.18■□□□□ 0.66
SMC6-206ENST00000446852 SULF1Q8IWU6 871 aa19.18■□□□□ 0.66
SMC6-206ENST00000446852 HAUS4Q9H6D7 363 aa19.18■□□□□ 0.66
SMC6-206ENST00000446852 XRCC5P13010 732 aaKnown RBP19.17■□□□□ 0.66
SMC6-206ENST00000446852 CCDC42Q96M95 316 aa19.17■□□□□ 0.66
SMC6-206ENST00000446852 LACRTQ9GZZ8 138 aa19.17■□□□□ 0.66
SMC6-206ENST00000446852 MYO1AQ9UBC5 1043 aa19.17■□□□□ 0.66
SMC6-206ENST00000446852 USO1O60763 962 aaKnown RBP19.17■□□□□ 0.66
SMC6-206ENST00000446852 SFNP31947 248 aa19.17■□□□□ 0.66
SMC6-206ENST00000446852 EIF4A3P38919 411 aaKnown RBP19.17■□□□□ 0.66
SMC6-206ENST00000446852 POLR2FP61218 127 aaKnown RBP19.17■□□□□ 0.66
SMC6-206ENST00000446852 NFIL3Q16649 462 aa19.17■□□□□ 0.66
SMC6-206ENST00000446852 DCAF17Q5H9S7 520 aaPredicted RBP19.17■□□□□ 0.66
SMC6-206ENST00000446852 UTP14CQ5TAP6 766 aaKnown RBP19.17■□□□□ 0.66
SMC6-206ENST00000446852 DPY19L2P1Q6NXN4 242 aa19.17■□□□□ 0.66
SMC6-206ENST00000446852 C4orf19Q8IY42 314 aa19.17■□□□□ 0.66
SMC6-206ENST00000446852 SLC35C1Q96A29 364 aa19.17■□□□□ 0.66
SMC6-206ENST00000446852 BORCS6Q96GS4 357 aa19.17■□□□□ 0.66
SMC6-206ENST00000446852 GANQ9H2C0 597 aa19.17■□□□□ 0.66
SMC6-206ENST00000446852 PCDHB13Q9Y5F0 798 aa19.17■□□□□ 0.66
SMC6-206ENST00000446852 BACH1O14867 736 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 TADA3O75528 432 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 AFPP02771 609 aaKnown RBP19.16■□□□□ 0.66
SMC6-206ENST00000446852 EPB41P11171 864 aaKnown RBP19.16■□□□□ 0.66
SMC6-206ENST00000446852 KCNA2P16389 499 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 PSMC5P62195 406 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 CCDC122Q5T0U0 273 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 HGSNATQ68CP4 663 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 ZNF662Q6ZS27 426 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 TRMT1LQ7Z2T5 733 aaKnown RBP19.16■□□□□ 0.66
SMC6-206ENST00000446852 KIAA1328Q86T90 577 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 SYT17Q9BSW7 474 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 RRP9O43818 475 aaKnown RBP19.16■□□□□ 0.66
SMC6-206ENST00000446852 TLR2O60603 784 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 KIF11P52732 1056 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 PPP2R3AQ06190 1150 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 STXBP4Q6ZWJ1 553 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 MTERF4Q7Z6M4 381 aaKnown RBP19.16■□□□□ 0.66
SMC6-206ENST00000446852 NLRX1Q86UT6 975 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 MNS1Q8NEH6 495 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 JAKMIP2Q96AA8 810 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 METTL14Q9HCE5 456 aaKnown RBP19.16■□□□□ 0.66
SMC6-206ENST00000446852 AGPAT3Q9NRZ7 376 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 TCEAL9Q9UHQ7 104 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 TELO2Q9Y4R8 837 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 CSADQ9Y600 493 aa19.16■□□□□ 0.66
SMC6-206ENST00000446852 MYH9P35579 1960 aaKnown RBP19.16■□□□□ 0.66
SMC6-206ENST00000446852 CTAGE9A4FU28 777 aa19.15■□□□□ 0.66
SMC6-206ENST00000446852 PPP1R12BO60237 982 aaPredicted RBP19.15■□□□□ 0.66
SMC6-206ENST00000446852 IPO7O95373 1038 aaKnown RBP19.15■□□□□ 0.66
SMC6-206ENST00000446852 C9orf131Q5VYM1 1079 aa19.15■□□□□ 0.66
SMC6-206ENST00000446852 PLA2G4FQ68DD2 849 aa19.15■□□□□ 0.66
SMC6-206ENST00000446852 ZNF746Q6NUN9 644 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms