RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 CCDC13Q8IYE1 715 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 STAG2Q8N3U4 1231 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 KCTD6Q8NC69 237 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 PRPF31Q8WWY3 499 aaKnown RBP19.24■□□□□ 0.67
ATG9A-215ENST00000446716 RAD54LQ92698 747 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 POLD4Q9HCU8 107 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 MYOZ2Q9NPC6 264 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 LMCD1Q9NZU5 365 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 LRRD1A4D1F6 860 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 NDUFB10O96000 172 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 ZNF18P17022 549 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 PTPN21Q16825 1174 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 ZNF449Q6P9G9 518 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 UHMK1Q8TAS1 419 aaKnown RBP19.24■□□□□ 0.67
ATG9A-215ENST00000446716 FAM213AQ9BRX8 229 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 SLC9A2Q9UBY0 812 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 ABCA6Q8N139 1617 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 OGFRQ9NZT2 677 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 SETBP1Q9Y6X0 1596 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 USP11P51784 963 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 LLGL1Q15334 1064 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 CEP85LQ5SZL2 805 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 B4GALNT4Q76KP1 1039 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 SGMS1Q86VZ5 419 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 PRDM5Q9NQX1 630 aaPredicted RBP19.23■□□□□ 0.67
ATG9A-215ENST00000446716 POTEFA5A3E0 1075 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 POTEIP0CG38 1075 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 ECE1P42892 770 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 ZNF699Q32M78 642 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 RESP18Q5W5W9 173 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 POTEGQ6S5H5 508 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 POTEEQ6S8J3 1075 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 OR6J1Q8NGC5 347 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 MCUR1Q96AQ8 359 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 POLR3FQ9H1D9 316 aaPredicted RBP19.23■□□□□ 0.67
ATG9A-215ENST00000446716 RIMBP3CA6NJZ7 1639 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 RIMBP3BA6NNM3 1639 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 RIMBP3Q9UFD9 1639 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 QRICH2Q9H0J4 1663 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 TDP2O95551 362 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 EPHB1P54762 984 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 CEP55Q53EZ4 464 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 SAMD7Q7Z3H4 446 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 EFCAB13Q8IY85 973 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 HOMER3Q9NSC5 361 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 GBP1P32455 592 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 GOLGA8FQ08AF8 430 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 GOLGA8DPQ0D2H9 430 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 MAPK8IP2Q13387 824 aaPredicted RBP19.23■□□□□ 0.67
ATG9A-215ENST00000446716 PSMD6Q15008 389 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 ELMOD1Q8N336 334 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 DEFB129Q9H1M3 183 aa19.23■□□□□ 0.67
ATG9A-215ENST00000446716 NGRNQ9NPE2 291 aaKnown RBP19.23■□□□□ 0.67
ATG9A-215ENST00000446716 NR3C1P04150 777 aa19.22■□□□□ 0.67
ATG9A-215ENST00000446716 EIF4A3P38919 411 aaKnown RBP19.22■□□□□ 0.67
ATG9A-215ENST00000446716 PDE1BQ01064 536 aa19.22■□□□□ 0.67
ATG9A-215ENST00000446716 SGO2Q562F6 1265 aa19.22■□□□□ 0.67
ATG9A-215ENST00000446716 PARD3BQ8TEW8 1205 aa19.22■□□□□ 0.67
ATG9A-215ENST00000446716 FNDC3AQ9Y2H6 1198 aaKnown RBP19.22■□□□□ 0.67
ATG9A-215ENST00000446716 MADDQ8WXG6 1647 aa19.22■□□□□ 0.67
ATG9A-215ENST00000446716 CCDC160A6NGH7 325 aa19.22■□□□□ 0.67
ATG9A-215ENST00000446716 SERPING1P05155 500 aa19.22■□□□□ 0.67
ATG9A-215ENST00000446716 BAATQ14032 418 aaPredicted RBP19.22■□□□□ 0.67
ATG9A-215ENST00000446716 ARHGEF18Q6ZSZ5 1173 aa19.22■□□□□ 0.67
ATG9A-215ENST00000446716 ZNF579Q8NAF0 562 aaKnown RBP19.22■□□□□ 0.67
ATG9A-215ENST00000446716 GANCQ8TET4 914 aa19.22■□□□□ 0.67
ATG9A-215ENST00000446716 NYAP2Q9P242 653 aa19.22■□□□□ 0.67
ATG9A-215ENST00000446716 STK25O00506 426 aa19.22■□□□□ 0.67
ATG9A-215ENST00000446716 JPH1Q9HDC5 661 aaPredicted RBP19.22■□□□□ 0.67
ATG9A-215ENST00000446716 CCL15-CCL14A0A0B4J2E2 113 aa19.21■□□□□ 0.67
ATG9A-215ENST00000446716 HEXIM1O94992 359 aaKnown RBP19.21■□□□□ 0.67
ATG9A-215ENST00000446716 GPC3P51654 580 aa19.21■□□□□ 0.67
ATG9A-215ENST00000446716 CCL15Q16663 113 aa19.21■□□□□ 0.67
ATG9A-215ENST00000446716 TTC1Q99614 292 aa19.21■□□□□ 0.67
ATG9A-215ENST00000446716 MRPL4Q9BYD3 311 aaKnown RBP19.21■□□□□ 0.67
ATG9A-215ENST00000446716 GCLMP48507 274 aa19.21■□□□□ 0.67
ATG9A-215ENST00000446716 STAT5BP51692 787 aa19.21■□□□□ 0.67
ATG9A-215ENST00000446716 ZNF543Q08ER8 600 aa19.21■□□□□ 0.67
ATG9A-215ENST00000446716 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.21■□□□□ 0.677e-8■■■■□ 26.2
ATG9A-215ENST00000446716 PVALEFA0A1B0GWK0 134 aa19.21■□□□□ 0.67
ATG9A-215ENST00000446716 RNF40O75150 1001 aa19.21■□□□□ 0.67
ATG9A-215ENST00000446716 CELF2O95319 508 aaKnown RBP19.21■□□□□ 0.67
ATG9A-215ENST00000446716 TROVE2P10155 538 aaKnown RBP eCLIP19.21■□□□□ 0.67
ATG9A-215ENST00000446716 DARS2Q6PI48 645 aaKnown RBP19.21■□□□□ 0.67
ATG9A-215ENST00000446716 RABEP2Q9H5N1 569 aa19.21■□□□□ 0.67
ATG9A-215ENST00000446716 AGLP35573 1532 aa19.21■□□□□ 0.67
ATG9A-215ENST00000446716 EFCAB8A8MWE9 144 aa19.21■□□□□ 0.67
ATG9A-215ENST00000446716 C6orf222P0C671 652 aaPredicted RBP19.21■□□□□ 0.67
ATG9A-215ENST00000446716 CDO1Q16878 200 aa19.21■□□□□ 0.67
ATG9A-215ENST00000446716 SBK1Q52WX2 424 aa19.21■□□□□ 0.67
ATG9A-215ENST00000446716 LAMC1P11047 1609 aa19.21■□□□□ 0.67
ATG9A-215ENST00000446716 KDM6AO15550 1401 aaPredicted RBP19.2■□□□□ 0.66
ATG9A-215ENST00000446716 ENC1O14682 589 aa19.2■□□□□ 0.66
ATG9A-215ENST00000446716 CYP2B6P20813 491 aa19.2■□□□□ 0.66
ATG9A-215ENST00000446716 GUCY2DQ02846 1103 aa19.2■□□□□ 0.66
ATG9A-215ENST00000446716 SLC35F6Q8N357 371 aa19.2■□□□□ 0.66
ATG9A-215ENST00000446716 SPZ1Q9BXG8 430 aa19.2■□□□□ 0.66
ATG9A-215ENST00000446716 SEL1LQ9UBV2 794 aa19.2■□□□□ 0.66
ATG9A-215ENST00000446716 NEXMIFQ5QGS0 1516 aa19.2■□□□□ 0.66
ATG9A-215ENST00000446716 DLC1Q96QB1 1528 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms