RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 AAASQ9NRG9 546 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 DIS3Q9Y2L1 958 aaKnown RBP12.59□□□□□ -0.39
FN1-212ENST00000446046 CASZ1Q86V15 1759 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 SUSD4Q5VX71 490 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 TTC30AQ86WT1 665 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 PPP1R2P1Q96PQ5 205 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 PIGSQ96S52 555 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 THAP9Q9H5L6 903 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 ZSWIM5Q9P217 1185 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 SMARCA1P28370 1054 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 FAM83BQ5T0W9 1011 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 ERICH1Q86X53 443 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 TTC13Q8NBP0 860 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 STK36Q9NRP7 1315 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 TAP1Q03518 808 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 IER5Q5VY09 327 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 TTLL11Q8NHH1 800 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 UBE2Q2Q8WVN8 375 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 MTA3Q9BTC8 594 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 SMYD2Q9NRG4 433 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 CEP170BQ9Y4F5 1589 aaPredicted RBP12.59□□□□□ -0.39
FN1-212ENST00000446046 PTH1RQ03431 593 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 CC2D1AQ6P1N0 951 aaPredicted RBP12.59□□□□□ -0.39
FN1-212ENST00000446046 ZNF560Q96MR9 790 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 CRAMP1Q96RY5 1269 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.59□□□□□ -0.39
FN1-212ENST00000446046 STAP1Q9ULZ2 295 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 AP3B1O00203 1094 aa12.58□□□□□ -0.39
FN1-212ENST00000446046 BUB1BO60566 1050 aaPredicted RBP12.58□□□□□ -0.39
FN1-212ENST00000446046 CDC25BP30305 580 aa12.58□□□□□ -0.39
FN1-212ENST00000446046 ADKP55263 362 aaKnown RBP12.58□□□□□ -0.39
FN1-212ENST00000446046 TKFCQ3LXA3 575 aa12.58□□□□□ -0.39
FN1-212ENST00000446046 RHOT2Q8IXI1 618 aa12.58□□□□□ -0.39
FN1-212ENST00000446046 TSPYL2Q9H2G4 693 aaPredicted RBP12.58□□□□□ -0.39
FN1-212ENST00000446046 EMILIN3Q9NT22 766 aa12.58□□□□□ -0.39
FN1-212ENST00000446046 MYCP01106 439 aaPredicted RBP12.58□□□□□ -0.4
FN1-212ENST00000446046 TAC1P20366 129 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 GPC3P51654 580 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 SLC16A10Q8TF71 515 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 KIF1AQ12756 1690 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 PEX3P56589 373 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 MXD4Q14582 209 aaPredicted RBP12.58□□□□□ -0.4
FN1-212ENST00000446046 TBC1D9BQ66K14 1250 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 CENPKQ9BS16 269 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 KLC2Q9H0B6 622 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 PRDM5Q9NQX1 630 aaPredicted RBP12.58□□□□□ -0.4
FN1-212ENST00000446046 PCDHA6Q9UN73 950 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 PCDHA8Q9Y5H6 950 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 A0A1B0GUA9 196 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 ZFXP17010 805 aaPredicted RBP12.58□□□□□ -0.4
FN1-212ENST00000446046 LCORLQ8N3X6 602 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 OR6J1Q8NGC5 347 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 SH3RF3Q8TEJ3 882 aaPredicted RBP12.58□□□□□ -0.4
FN1-212ENST00000446046 USP28Q96RU2 1077 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 ZBED1O96006 694 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 PYGLP06737 847 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 SCP2P22307 547 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 MSH2P43246 934 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 CERKQ8TCT0 537 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 KIDINS220Q9ULH0 1771 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 CYBBP04839 570 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 PLCG1P19174 1290 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 TBCCQ15814 346 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 ASNSD1Q9NWL6 643 aa12.58□□□□□ -0.4
FN1-212ENST00000446046 DNAJC8O75937 253 aaPredicted RBP12.57□□□□□ -0.4
FN1-212ENST00000446046 PSMA2P25787 234 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 INPP5BP32019 993 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 EFNA5P52803 228 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 QARSP47897 775 aaKnown RBP12.57□□□□□ -0.4
FN1-212ENST00000446046 RASGRF1Q13972 1273 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 FOPNLQ96NB1 174 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 TUBB6Q9BUF5 446 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 KRT1P04264 644 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 RARBP10826 455 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 TAF1BQ53T94 588 aaPredicted RBP12.57□□□□□ -0.4
FN1-212ENST00000446046 DEPDC1BQ8WUY9 529 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 OTUD5Q96G74 571 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 PUS3Q9BZE2 481 aaKnown RBP12.57□□□□□ -0.4
FN1-212ENST00000446046 MED4Q9NPJ6 270 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 MED14O60244 1454 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 DLC1Q96QB1 1528 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 VPS41P49754 854 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 SCN4BQ8IWT1 228 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 TBC1D19Q8N5T2 526 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 TRIM54Q9BYV2 358 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 PCDHA7Q9UN72 937 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 CCDC151A5D8V7 595 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 BRD1O95696 1058 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 MGARPQ8TDB4 240 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 KIAA0391O15091 583 aaKnown RBP12.57□□□□□ -0.4
FN1-212ENST00000446046 CPT1AP50416 773 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 GPSM2P81274 684 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 EIF2B5Q13144 721 aaKnown RBP12.57□□□□□ -0.4
FN1-212ENST00000446046 LAMB3Q13751 1172 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 PPME1Q9Y570 386 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 SLC4A7Q9Y6M7 1214 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 SYNGAP1Q96PV0 1343 aa12.57□□□□□ -0.4
FN1-212ENST00000446046 CCDC38Q502W7 563 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 RNF146Q9NTX7 359 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 PTPN22Q9Y2R2 807 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms