RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 A0A087WWV3 80 aa19.27■□□□□ 0.68
LIME1-202ENST00000444951 ZEB2O60315 1214 aa19.27■□□□□ 0.68
LIME1-202ENST00000444951 PPFIA4O75335 1185 aa19.27■□□□□ 0.68
LIME1-202ENST00000444951 MED24O75448 989 aa19.27■□□□□ 0.68
LIME1-202ENST00000444951 PDXDC2PQ6P474 469 aa19.27■□□□□ 0.68
LIME1-202ENST00000444951 USP38Q8NB14 1042 aa19.27■□□□□ 0.68
LIME1-202ENST00000444951 RDM1Q8NG50 284 aa19.27■□□□□ 0.68
LIME1-202ENST00000444951 CDK5RAP3Q96JB5 506 aa19.27■□□□□ 0.68
LIME1-202ENST00000444951 PCYT2Q99447 389 aa19.27■□□□□ 0.68
LIME1-202ENST00000444951 LXNQ9BS40 222 aa19.27■□□□□ 0.68
LIME1-202ENST00000444951 ZNF576Q9H609 170 aa19.27■□□□□ 0.68
LIME1-202ENST00000444951 SCN5AQ14524 2016 aa19.26■□□□□ 0.67
LIME1-202ENST00000444951 POTEB3A0JP26 581 aa19.26■□□□□ 0.67
LIME1-202ENST00000444951 GADD45BO75293 160 aaPredicted RBP19.26■□□□□ 0.67
LIME1-202ENST00000444951 P4HBP07237 508 aaKnown RBP19.26■□□□□ 0.67
LIME1-202ENST00000444951 TXLNAP40222 546 aa19.26■□□□□ 0.67
LIME1-202ENST00000444951 STAT5BP51692 787 aa19.26■□□□□ 0.67
LIME1-202ENST00000444951 PURAQ00577 322 aaKnown RBP19.26■□□□□ 0.67
LIME1-202ENST00000444951 HAUS3Q68CZ6 603 aa19.26■□□□□ 0.67
LIME1-202ENST00000444951 ADALQ6DHV7 355 aa19.26■□□□□ 0.67
LIME1-202ENST00000444951 PSRC1Q6PGN9 363 aaPredicted RBP19.26■□□□□ 0.67
LIME1-202ENST00000444951 POTEBQ6S5H4 581 aa19.26■□□□□ 0.67
LIME1-202ENST00000444951 CLEC17AQ6ZS10 378 aa19.26■□□□□ 0.67
LIME1-202ENST00000444951 CATSPER3Q86XQ3 398 aa19.26■□□□□ 0.67
LIME1-202ENST00000444951 MMTAG2Q9BU76 263 aaKnown RBP19.26■□□□□ 0.67
LIME1-202ENST00000444951 TRMT13Q9NUP7 481 aaKnown RBP19.26■□□□□ 0.67
LIME1-202ENST00000444951 SLITRK3O94933 977 aa19.25■□□□□ 0.67
LIME1-202ENST00000444951 SPATA31C1P0DKV0 1188 aa19.25■□□□□ 0.67
LIME1-202ENST00000444951 CYP2C9P11712 490 aa19.25■□□□□ 0.67
LIME1-202ENST00000444951 QARSP47897 775 aaKnown RBP19.25■□□□□ 0.67
LIME1-202ENST00000444951 KARSQ15046 597 aaKnown RBP19.25■□□□□ 0.67
LIME1-202ENST00000444951 ECM1Q16610 540 aa19.25■□□□□ 0.67
LIME1-202ENST00000444951 RESP18Q5W5W9 173 aa19.25■□□□□ 0.67
LIME1-202ENST00000444951 POTEGQ6S5H5 508 aa19.25■□□□□ 0.67
LIME1-202ENST00000444951 PDILTQ8N807 584 aa19.25■□□□□ 0.67
LIME1-202ENST00000444951 FSIP1Q8NA03 581 aa19.25■□□□□ 0.67
LIME1-202ENST00000444951 ZNF579Q8NAF0 562 aaKnown RBP19.25■□□□□ 0.67
LIME1-202ENST00000444951 HERVK_113Q902F9 699 aa19.25■□□□□ 0.67
LIME1-202ENST00000444951 ATP6V0A1Q93050 837 aa19.25■□□□□ 0.67
LIME1-202ENST00000444951 CALML4Q96GE6 196 aa19.25■□□□□ 0.67
LIME1-202ENST00000444951 SCLYQ96I15 445 aa19.25■□□□□ 0.67
LIME1-202ENST00000444951 HSD17B14Q9BPX1 270 aa19.25■□□□□ 0.67
LIME1-202ENST00000444951 SMARCAD1Q9H4L7 1026 aa19.25■□□□□ 0.67
LIME1-202ENST00000444951 FAM13BQ9NYF5 915 aa19.25■□□□□ 0.67
LIME1-202ENST00000444951 WRAP73Q9P2S5 460 aaPredicted RBP19.25■□□□□ 0.67
LIME1-202ENST00000444951 EMSYQ7Z589 1322 aa19.25■□□□□ 0.67
LIME1-202ENST00000444951 IGKV6D-21A0A0A0MT36 114 aa19.24■□□□□ 0.67
LIME1-202ENST00000444951 A0A1B0GVL5 298 aa19.24■□□□□ 0.67
LIME1-202ENST00000444951 GOLGA6L22H0YM25 854 aa19.24■□□□□ 0.67
LIME1-202ENST00000444951 H3BRB1 525 aa19.24■□□□□ 0.67
LIME1-202ENST00000444951 LGR5O75473 907 aa19.24■□□□□ 0.67
LIME1-202ENST00000444951 HOXD8P13378 290 aaPredicted RBP19.24■□□□□ 0.67
LIME1-202ENST00000444951 PSMC5P62195 406 aa19.24■□□□□ 0.67
LIME1-202ENST00000444951 OTOP2Q7RTS6 562 aa19.24■□□□□ 0.67
LIME1-202ENST00000444951 TMEM87AQ8NBN3 555 aa19.24■□□□□ 0.67
LIME1-202ENST00000444951 NEK9Q8TD19 979 aa19.24■□□□□ 0.67
LIME1-202ENST00000444951 C16orf70Q9BSU1 422 aa19.24■□□□□ 0.67
LIME1-202ENST00000444951 MTG1Q9BT17 334 aaPredicted RBP19.24■□□□□ 0.67
LIME1-202ENST00000444951 POLR3CQ9BUI4 534 aaPredicted RBP19.24■□□□□ 0.67
LIME1-202ENST00000444951 TUT1Q9H6E5 874 aaKnown RBP19.24■□□□□ 0.67
LIME1-202ENST00000444951 TUFT1Q9NNX1 390 aa19.24■□□□□ 0.67
LIME1-202ENST00000444951 DDX19AQ9NUU7 478 aaKnown RBP19.24■□□□□ 0.67
LIME1-202ENST00000444951 ZNF215Q9UL58 517 aaPredicted RBP19.24■□□□□ 0.67
LIME1-202ENST00000444951 KIAA1024Q9UPX6 916 aa19.24■□□□□ 0.67
LIME1-202ENST00000444951 STK24Q9Y6E0 443 aa19.24■□□□□ 0.67
LIME1-202ENST00000444951 TMEM150BA6NC51 233 aa19.23■□□□□ 0.67
LIME1-202ENST00000444951 DDX11L8A8MPP1 907 aa19.23■□□□□ 0.67
LIME1-202ENST00000444951 ZBTB39O15060 712 aa19.23■□□□□ 0.67
LIME1-202ENST00000444951 ZNF862O60290 1169 aa19.23■□□□□ 0.67
LIME1-202ENST00000444951 KPNA6O60684 536 aa19.23■□□□□ 0.67
LIME1-202ENST00000444951 CMA1P23946 247 aa19.23■□□□□ 0.67
LIME1-202ENST00000444951 RPA1P27694 616 aa19.23■□□□□ 0.67
LIME1-202ENST00000444951 PSEN2P49810 448 aa19.23■□□□□ 0.67
LIME1-202ENST00000444951 PRKCEQ02156 737 aa19.23■□□□□ 0.67
LIME1-202ENST00000444951 GRB10Q13322 594 aa19.23■□□□□ 0.67
LIME1-202ENST00000444951 PLPPR4Q7Z2D5 763 aa19.23■□□□□ 0.67
LIME1-202ENST00000444951 PIGOQ8TEQ8 1089 aa19.23■□□□□ 0.67
LIME1-202ENST00000444951 MRPS27Q92552 414 aaKnown RBP19.23■□□□□ 0.67
LIME1-202ENST00000444951 PNMA5Q96PV4 448 aa19.23■□□□□ 0.67
LIME1-202ENST00000444951 ZSWIM4Q9H7M6 989 aa19.23■□□□□ 0.67
LIME1-202ENST00000444951 ERAP1Q9NZ08 941 aa19.23■□□□□ 0.67
LIME1-202ENST00000444951 CCDC39Q9UFE4 941 aa19.23■□□□□ 0.67
LIME1-202ENST00000444951 TRPC6Q9Y210 931 aa19.23■□□□□ 0.67
LIME1-202ENST00000444951 YBX2Q9Y2T7 364 aaKnown RBP19.23■□□□□ 0.67
LIME1-202ENST00000444951 MAFBQ9Y5Q3 323 aaPredicted RBP19.23■□□□□ 0.67
LIME1-202ENST00000444951 IGSF9BQ9UPX0 1349 aa19.23■□□□□ 0.67
LIME1-202ENST00000444951 KDM3AQ9Y4C1 1321 aa19.23■□□□□ 0.67
LIME1-202ENST00000444951 A0A1W2PQ27 194 aa19.22■□□□□ 0.67
LIME1-202ENST00000444951 A0A1W2PQ64 194 aa19.22■□□□□ 0.67
LIME1-202ENST00000444951 A0A1W2PQD8 194 aa19.22■□□□□ 0.67
LIME1-202ENST00000444951 RBAK-RBAKDNI3L0D1 243 aa19.22■□□□□ 0.67
LIME1-202ENST00000444951 FGBP02675 491 aa19.22■□□□□ 0.67
LIME1-202ENST00000444951 PFKFB1P16118 471 aa19.22■□□□□ 0.67
LIME1-202ENST00000444951 PLCG1P19174 1290 aa19.22■□□□□ 0.67
LIME1-202ENST00000444951 ATP4AP20648 1035 aa19.22■□□□□ 0.67
LIME1-202ENST00000444951 MFSD10Q14728 455 aa19.22■□□□□ 0.67
LIME1-202ENST00000444951 PLCB4Q15147 1175 aa19.22■□□□□ 0.67
LIME1-202ENST00000444951 KIAA0753Q2KHM9 967 aa19.22■□□□□ 0.67
LIME1-202ENST00000444951 NBPF20Q3BBV1 942 aa19.22■□□□□ 0.67
LIME1-202ENST00000444951 AFAP1L1Q8TED9 768 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms