RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 SHC3Q92529 594 aa4.4□□□□□ -1.71
UBR3-206ENST00000444475 VWCEQ96DN2 955 aa4.4□□□□□ -1.71
UBR3-206ENST00000444475 FAM163AQ96GL9 167 aaPredicted RBP4.4□□□□□ -1.71
UBR3-206ENST00000444475 ABHD17AQ96GS6 310 aa4.4□□□□□ -1.71
UBR3-206ENST00000444475 DHRS1Q96LJ7 313 aa4.4□□□□□ -1.71
UBR3-206ENST00000444475 TMEM237Q96Q45 408 aa4.4□□□□□ -1.71
UBR3-206ENST00000444475 OR10A4Q9H209 315 aa4.4□□□□□ -1.71
UBR3-206ENST00000444475 ORC3Q9UBD5 711 aaPredicted RBP4.4□□□□□ -1.71
UBR3-206ENST00000444475 AXIN2Q9Y2T1 843 aa4.4□□□□□ -1.71
UBR3-206ENST00000444475 A0A0B4J269 797 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 ENC1O14682 589 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 BACH1O14867 736 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 TLR3O15455 904 aaKnown RBP4.39□□□□□ -1.71
UBR3-206ENST00000444475 PPFIA2O75334 1257 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 NEK4P51957 841 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 KIF11P52732 1056 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 SLC26A5P58743 744 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 OASLQ15646 514 aaKnown RBP4.39□□□□□ -1.71
UBR3-206ENST00000444475 FLYWCH1Q4VC44 716 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 INTS5Q6P9B9 1019 aaKnown RBP4.39□□□□□ -1.71
UBR3-206ENST00000444475 ZNF783Q6ZMS7 281 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 C15orf52Q6ZUT6 534 aaKnown RBP4.39□□□□□ -1.71
UBR3-206ENST00000444475 ILDR2Q71H61 639 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 LRRC43Q8N309 656 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 CCDC148Q8NFR7 591 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 USP6NLQ92738 828 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 PDCD2LQ9BRP1 358 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 APOL5Q9BWW9 433 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 MROH8Q9H579 483 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 DNAJC18Q9H819 358 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 FAM204AQ9H8W3 233 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 TCP11L1Q9NUJ3 509 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 INTS10Q9NVR2 710 aaKnown RBP4.39□□□□□ -1.71
UBR3-206ENST00000444475 ZNF624Q9P2J8 865 aaPredicted RBP4.39□□□□□ -1.71
UBR3-206ENST00000444475 RIMKLBQ9ULI2 386 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 LCHNA4D1U4 455 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 LRRC72A6NJI9 287 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 TBKBP1A7MCY6 615 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 ADAMTS3O15072 1205 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 CAPN2P17655 700 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 PTPN2P17706 415 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 MAPK4P31152 587 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 GPC3P51654 580 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 AGFG1P52594 562 aaKnown RBP4.39□□□□□ -1.71
UBR3-206ENST00000444475 IFI35P80217 286 aaPredicted RBP4.39□□□□□ -1.71
UBR3-206ENST00000444475 NRG1Q02297 640 aaPredicted RBP4.39□□□□□ -1.71
UBR3-206ENST00000444475 FBXO47Q5MNV8 452 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 TBCELQ5QJ74 424 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 IFIT1BQ5T764 474 aaKnown RBP4.39□□□□□ -1.71
UBR3-206ENST00000444475 LILRA6Q6PI73 481 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 VSIG10LQ86VR7 867 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 CREG2Q8IUH2 290 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 LRRC49Q8IUZ0 686 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 SEPT12Q8IYM1 358 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 SPERTQ8NA61 448 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 PCSK9Q8NBP7 692 aaKnown RBP4.39□□□□□ -1.71
UBR3-206ENST00000444475 OR6C4Q8NGE1 309 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 ATP2A3Q93084 1043 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 LRRC59Q96AG4 307 aaKnown RBP4.39□□□□□ -1.71
UBR3-206ENST00000444475 BICD1Q96G01 975 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 CLMNQ96JQ2 1002 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 PHF12Q96QT6 1004 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 WDR24Q96S15 920 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 TBCCD1Q9NVR7 557 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 GRID1Q9ULK0 1009 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 HPCAL4Q9UM19 191 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 USP3Q9Y6I4 520 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 PI4KAP2A4QPH2 592 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 EML1O00423 815 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 NPC1O15118 1278 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 ASAP2O43150 1006 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 SEC22BO75396 215 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 OFD1O75665 1012 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 EEF2P13639 858 aaKnown RBP4.39□□□□□ -1.71
UBR3-206ENST00000444475 PORP16435 677 aaPredicted RBP4.39□□□□□ -1.71
UBR3-206ENST00000444475 CTSSP25774 331 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 CNTFP26441 200 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 IGFALSP35858 605 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 COG2Q14746 738 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 NCAPHQ15003 741 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 ZYXQ15942 572 aaKnown RBP4.39□□□□□ -1.71
UBR3-206ENST00000444475 CFAP100Q494V2 611 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 RAB12Q6IQ22 244 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 JMJD6Q6NYC1 403 aaPredicted RBP4.39□□□□□ -1.71
UBR3-206ENST00000444475 PRR18Q8N4B5 295 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 CEP76Q8TAP6 659 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 KIAA1524Q8TCG1 905 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 RUFY2Q8WXA3 655 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 HTRA1Q92743 480 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 ZNF845Q96IR2 970 aaPredicted RBP4.39□□□□□ -1.71
UBR3-206ENST00000444475 TM9SF2Q99805 663 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 TACO1Q9BSH4 297 aaKnown RBP4.39□□□□□ -1.71
UBR3-206ENST00000444475 LRFN3Q9BTN0 628 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 VCPKMTQ9H867 229 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 CNTD2Q9H8S5 307 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 ETNK1Q9HBU6 452 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 ADGRE2Q9UHX3 823 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 DACH1Q9UI36 760 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 NSD2O96028 1365 aa4.39□□□□□ -1.71
UBR3-206ENST00000444475 SLC12A8A0AV02 714 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms