RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 CALCAP01258 141 aa20.69■□□□□ 0.9
PAXBP1-204ENST00000443785 SNHG28P0DPA3 235 aa20.69■□□□□ 0.9
PAXBP1-204ENST00000443785 ECE1P42892 770 aa20.69■□□□□ 0.9
PAXBP1-204ENST00000443785 NOVA2Q9UNW9 492 aaKnown RBP20.69■□□□□ 0.9
PAXBP1-204ENST00000443785 LAMB1P07942 1786 aa20.69■□□□□ 0.9
PAXBP1-204ENST00000443785 MSH4O15457 936 aa20.68■□□□□ 0.9
PAXBP1-204ENST00000443785 SHOX2O60902 331 aaPredicted RBP20.68■□□□□ 0.9
PAXBP1-204ENST00000443785 TNNC1P63316 161 aa20.68■□□□□ 0.9
PAXBP1-204ENST00000443785 LRRC27Q9C0I9 530 aa20.68■□□□□ 0.9
PAXBP1-204ENST00000443785 TDRD3Q9H7E2 651 aaKnown RBP20.68■□□□□ 0.9
PAXBP1-204ENST00000443785 GAKO14976 1311 aa20.68■□□□□ 0.9
PAXBP1-204ENST00000443785 GH2P01242 217 aa20.68■□□□□ 0.9
PAXBP1-204ENST00000443785 GALCP54803 685 aa20.68■□□□□ 0.9
PAXBP1-204ENST00000443785 UAP1Q16222 522 aaPredicted RBP20.68■□□□□ 0.9
PAXBP1-204ENST00000443785 PPP1R9AQ9ULJ8 1098 aa20.68■□□□□ 0.9
PAXBP1-204ENST00000443785 PCDHGC5Q9Y5F6 944 aa20.68■□□□□ 0.9
PAXBP1-204ENST00000443785 COL22A1Q8NFW1 1626 aaPredicted RBP20.68■□□□□ 0.9
PAXBP1-204ENST00000443785 LAMB2P55268 1798 aa20.68■□□□□ 0.9
PAXBP1-204ENST00000443785 MYH1P12882 1939 aa20.68■□□□□ 0.9
PAXBP1-204ENST00000443785 TMEM150BA6NC51 233 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 HGSO14964 777 aaPredicted RBP20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 OTUD6BQ8N6M0 293 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 ZSWIM2Q8NEG5 633 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 DYDC2Q96IM9 177 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 EVI5O60447 810 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 SLCO1A2P46721 670 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 GTF2A1P52655 376 aaPredicted RBP20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 ALS2CLQ60I27 953 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 TBC1D22AQ8WUA7 517 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 TEKT1Q969V4 418 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 CEP63Q96MT8 703 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 SMCHD1A6NHR9 2005 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 GOLGA6L10A6NI86 522 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 BUB1BO60566 1050 aaPredicted RBP20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 TRIM37O94972 964 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 CRKP46108 304 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 CBWD6Q4V339 395 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 CBWD3Q5JTY5 395 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 CBWD5Q5RIA9 395 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 TPCN2Q8NHX9 752 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 ARHGEF26Q96DR7 871 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 HOOK2Q96ED9 719 aa20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 EIF2AK1Q9BQI3 630 aaKnown RBP20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 ATF5Q9Y2D1 282 aaPredicted RBP20.67■□□□□ 0.9
PAXBP1-204ENST00000443785 ASTN1O14525 1302 aa20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 KDM3AQ9Y4C1 1321 aa20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 IGKV6D-41A0A0C4DH26 115 aa20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 FAM13AO94988 1023 aa20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 H2AFZP0C0S5 128 aa20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 KRT13P13646 458 aa20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 GPATCH4Q5T3I0 446 aaKnown RBP20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 H2AFVQ71UI9 128 aa20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 SIAH1Q8IUQ4 282 aa20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 CAVIN3Q969G5 261 aa20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 SLC35C1Q96A29 364 aa20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 KCNMB3Q9NPA1 279 aa20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 RABGAP1Q9Y3P9 1069 aa20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 NDUFB10O96000 172 aa20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 EPB41P11171 864 aaKnown RBP20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 MNAT1P51948 309 aa20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 FBXO11Q86XK2 927 aa20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 BTBD6Q96KE9 485 aa20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 CCDC113Q9H0I3 377 aa20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 TAF1DQ9H5J8 278 aaPredicted RBP20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 AIPL1Q9NZN9 384 aa20.66■□□□□ 0.9
PAXBP1-204ENST00000443785 RBAK-RBAKDNI3L0D1 243 aa20.65■□□□□ 0.9
PAXBP1-204ENST00000443785 KIAA0754O94854 1291 aa20.65■□□□□ 0.9
PAXBP1-204ENST00000443785 DRAP1Q14919 205 aaPredicted RBP20.65■□□□□ 0.9
PAXBP1-204ENST00000443785 COBLL1Q53SF7 1204 aa20.65■□□□□ 0.9
PAXBP1-204ENST00000443785 GBP6Q6ZN66 633 aa20.65■□□□□ 0.9
PAXBP1-204ENST00000443785 SH3BP5LQ7L8J4 393 aa20.65■□□□□ 0.9
PAXBP1-204ENST00000443785 LNX1Q8TBB1 728 aaPredicted RBP20.65■□□□□ 0.9
PAXBP1-204ENST00000443785 DNAJC17Q9NVM6 304 aaKnown RBP20.65■□□□□ 0.9
PAXBP1-204ENST00000443785 CNOT8Q9UFF9 292 aaKnown RBP20.65■□□□□ 0.9
PAXBP1-204ENST00000443785 MYH7BA7E2Y1 1941 aa20.65■□□□□ 0.9
PAXBP1-204ENST00000443785 CLRN2A0PK11 232 aa20.65■□□□□ 0.9
PAXBP1-204ENST00000443785 SPIRE1Q08AE8 756 aa20.65■□□□□ 0.9
PAXBP1-204ENST00000443785 QPCTQ16769 361 aa20.65■□□□□ 0.9
PAXBP1-204ENST00000443785 KRT71Q3SY84 523 aa20.65■□□□□ 0.9
PAXBP1-204ENST00000443785 SLC35G2Q8TBE7 412 aa20.65■□□□□ 0.9
PAXBP1-204ENST00000443785 ETNPPLQ8TBG4 499 aa20.65■□□□□ 0.9
PAXBP1-204ENST00000443785 ATP6V1G3Q96LB4 118 aa20.65■□□□□ 0.9
PAXBP1-204ENST00000443785 CCT8L2Q96SF2 557 aa20.65■□□□□ 0.9
PAXBP1-204ENST00000443785 SNX24Q9Y343 169 aa20.65■□□□□ 0.9
PAXBP1-204ENST00000443785 PHF20L1A8MW92 1017 aa20.64■□□□□ 0.9
PAXBP1-204ENST00000443785 MARCKSL1P49006 195 aa20.64■□□□□ 0.9
PAXBP1-204ENST00000443785 IFFO1Q0D2I5 559 aa20.64■□□□□ 0.9
PAXBP1-204ENST00000443785 RRP1BQ14684 758 aaKnown RBP20.64■□□□□ 0.9
PAXBP1-204ENST00000443785 SPRED3Q2MJR0 410 aa20.64■□□□□ 0.9
PAXBP1-204ENST00000443785 EFCAB13Q8IY85 973 aa20.64■□□□□ 0.9
PAXBP1-204ENST00000443785 FAM186BQ8IYM0 893 aa20.64■□□□□ 0.9
PAXBP1-204ENST00000443785 SLC20A1Q8WUM9 679 aa20.64■□□□□ 0.9
PAXBP1-204ENST00000443785 THAP2Q9H0W7 228 aa20.64■□□□□ 0.9
PAXBP1-204ENST00000443785 ERVK-5Q9HDB9 667 aa20.64■□□□□ 0.9
PAXBP1-204ENST00000443785 DNAJC12Q9UKB3 198 aa20.64■□□□□ 0.9
PAXBP1-204ENST00000443785 PTPN22Q9Y2R2 807 aa20.64■□□□□ 0.9
PAXBP1-204ENST00000443785 FOXO6A8MYZ6 492 aa20.64■□□□□ 0.89
PAXBP1-204ENST00000443785 PGRMC1O00264 195 aaKnown RBP20.64■□□□□ 0.89
PAXBP1-204ENST00000443785 ECHS1P30084 290 aa20.64■□□□□ 0.89
PAXBP1-204ENST00000443785 USP11P51784 963 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms