RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 MYH9P35579 1960 aaKnown RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 MYH11P35749 1972 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 EMSYQ7Z589 1322 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 SYNGAP1Q96PV0 1343 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 IGSF9BQ9UPX0 1349 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 SMCHD1A6NHR9 2005 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 ARID2Q68CP9 1835 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 COL1A2P08123 1366 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 ZNFX1Q9P2E3 1918 aaKnown RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 LRRC37A2A6NM11 1700 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 IGKV6-21A0A0C4DH24 114 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 POTEB3A0JP26 581 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 POTEFA5A3E0 1075 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 ARHGEF35A5YM69 484 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 MANSC4A6NHS7 340 aaPredicted RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 PP2D1A8MPX8 630 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 BTNL10A8MVZ5 291 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 POTECB2RU33 542 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 EIF3CLB5ME19 914 aaKnown RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 E9PMD0 336 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 POTEB2H3BUK9 544 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 RBAK-RBAKDNI3L0D1 243 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 RAD21O60216 631 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 MFAP3LO75121 409 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 ZC3H11AO75152 810 aaKnown RBP eCLIP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 PPFIA4O75335 1185 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 MAFO75444 373 aaPredicted RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 LGR5O75473 907 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 FAM13AO94988 1023 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 IPO7O95373 1038 aaKnown RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 ALDH1A1P00352 501 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 KRT18P05783 430 aaKnown RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 SUPT20HL2P0C7V6 817 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 POTEIP0CG38 1075 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 ARP10275 920 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 EPB41P11171 864 aaKnown RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 FCER1AP12319 257 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 XRCC5P13010 732 aaKnown RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 HOXD8P13378 290 aaPredicted RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 ATP1A3P13637 1013 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 PRLRP16471 622 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 CAPN2P17655 700 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 GARTP22102 1010 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 CDC25AP30304 524 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 MAPK4P31152 587 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 HOXA13P31271 388 aaPredicted RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 YWHABP31946 246 aaKnown RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 GTF2H1P32780 548 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 CYLC1P35663 651 aaPredicted RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 PRKCIP41743 596 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 NAMPTP43490 491 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 VASPP50552 380 aaPredicted RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 ALDH5A1P51649 535 aaPredicted RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 ETF1P62495 437 aaKnown RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 ERVK-9P63128 1117 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 ERVK-24P63145 666 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 NKX3-2P78367 333 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 CLDN10P78369 228 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 UBXN1Q04323 297 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 ITIH3Q06033 890 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 TBC1D8BQ0IIM8 1120 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 GRM1Q13255 1194 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 MAPK8IP2Q13387 824 aaPredicted RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 ADAM9Q13443 819 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 MOGSQ13724 837 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 LAMC2Q13753 1193 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 MCM6Q14566 821 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 MXD4Q14582 209 aaPredicted RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 KCTD2Q14681 263 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 SURF1Q15526 300 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 PTPN14Q15678 1187 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 GPR162Q16538 588 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 KYAT1Q16773 422 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 SHROOM1Q2M3G4 852 aaPredicted RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 MUM1L1Q5H9M0 696 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 MIIPQ5JXC2 388 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 IER5Q5VY09 327 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 FAM160B1Q5W0V3 765 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 ANKRD40Q6AI12 368 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 NCAPH2Q6IBW4 605 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 SLFN12LQ6IEE8 588 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 GPAT2Q6NUI2 795 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 ARMCX5Q6P1M9 558 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 CCDC174Q6PII3 467 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 POTEBQ6S5H4 581 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 POTEGQ6S5H5 508 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 POTEEQ6S8J3 1075 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 SAMD1Q6SPF0 538 aaPredicted RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 PADI6Q6TGC4 694 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 ENOSF1Q7L5Y1 443 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 TMC6Q7Z403 805 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 KCNK18Q7Z418 384 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 IFNLR1Q8IU57 520 aaPredicted RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 TMEM139Q8IV31 216 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 MAP4K3Q8IVH8 894 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 CDAN1Q8IWY9 1227 aa3.11□□□□□ -1.91
LINC00393-201ENST00000443621 TRMT44Q8IYL2 757 aaKnown RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 CCAR2Q8N163 923 aaKnown RBP3.11□□□□□ -1.91
LINC00393-201ENST00000443621 RNF10Q8N5U6 811 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms