RNA–Protein interactions for RNA: ENST00000442921.6

PTPRO-203, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 3,030 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-203ENST00000442921 EPS15L1Q9UBC2 864 aa5.67□□□□□ -1.5
PTPRO-203ENST00000442921 SPEF2Q9C093 1822 aa5.67□□□□□ -1.5
PTPRO-203ENST00000442921 LAMB4A4D0S4 1761 aa5.67□□□□□ -1.5
PTPRO-203ENST00000442921 RGPD5Q99666 1765 aa5.67□□□□□ -1.5
PTPRO-203ENST00000442921 PARP4Q9UKK3 1724 aaKnown RBP5.67□□□□□ -1.5
PTPRO-203ENST00000442921 ENO4A6NNW6 628 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 M0QX08 132 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 IFRD1O00458 451 aaPredicted RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 GJB2P29033 226 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 UBXN2AP68543 259 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 TNIP1Q15025 636 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 PPP2R5BQ15173 497 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 ZYXQ15942 572 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CREB3L3Q68CJ9 461 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 PSAPL1Q6NUJ1 521 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 IRGCQ6NXR0 463 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 OLFML1Q6UWY5 402 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CHPFQ8IZ52 775 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 LILRB2Q8N423 598 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 TRIM58Q8NG06 486 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 APPBP2Q92624 585 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 ZNF75CPQ92670 426 aaPredicted RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 USP6NLQ92738 828 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 RBM41Q96IZ5 413 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 RHOVQ96L33 236 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 KCNF1Q9H3M0 494 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 PDRG1Q9NUG6 133 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 TLR7Q9NYK1 1049 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CLIC5Q9NZA1 410 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 TCEAL9Q9UHQ7 104 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 FAM184BQ9ULE4 1060 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CYP46A1Q9Y6A2 500 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 ARFGEF2Q9Y6D5 1785 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 PKD1L3Q7Z443 1732 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 A0A1W2PRQ8 180 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 PDE2AO00408 941 aaPredicted RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CHUKO15111 745 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 ZEB2O60315 1214 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 DIAPH2O60879 1101 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 ATP6V1G1O75348 118 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 ZNF189O75820 626 aaPredicted RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 HSPA1AP0DMV8 641 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 HSPA1BP0DMV9 641 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 BCRP11274 1271 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CASTP20810 708 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 MATR3P43243 847 aaKnown RBP eCLIP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 MAGEA10P43363 369 aaPredicted RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 VPS72Q15906 364 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CCDC38Q502W7 563 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 SMUG1Q53HV7 270 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 PPFIBP1Q86W92 1011 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 LINS1Q8NG48 757 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 PPP1R14CQ8TAE6 165 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 KLHDC4Q8TBB5 520 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 OSBPL5Q9H0X9 879 aaPredicted RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 KRT82Q9NSB4 513 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 TPCN1Q9ULQ1 816 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 AFDNP55196 1824 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 LOC102724428A0A0B4J2F2 783 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CCDC163A0A0D9SF12 145 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 SLC35F4A4IF30 521 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 SMAD7O15105 426 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 SPTLC2O15270 562 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 RNMTO43148 476 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 KCNQ3O43525 872 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 DNAJA2O60884 412 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 RNASEH2AO75792 299 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CTSBP07858 339 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 SFTPCP11686 197 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 HCLS1P14317 486 aaPredicted RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 KCNA6P17658 529 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 RRM1P23921 792 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 HNRNPH1P31943 449 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 KIF5BP33176 963 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 SIK1P57059 783 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 NXNQ6DKJ4 435 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 TLDC1Q6P9B6 456 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CWC27Q6UX04 472 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 XKR5Q6UX68 686 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 ZNF804AQ7Z570 1209 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 TTC6Q86TZ1 520 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 WDR66Q8TBY9 1149 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CCDC114Q96M63 670 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 NEK1Q96PY6 1258 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 PCDH18Q9HCL0 1135 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 TRAF3IP3Q9Y228 551 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 KIF1AQ12756 1690 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 NUP188Q5SRE5 1749 aa5.65□□□□□ -1.5
PTPRO-203ENST00000442921 CCDC162PA2VCL2 907 aa5.65□□□□□ -1.5
PTPRO-203ENST00000442921 GOLGA6L4A6NEF3 574 aa5.65□□□□□ -1.5
PTPRO-203ENST00000442921 GOLGA6L9A6NEM1 432 aa5.65□□□□□ -1.5
PTPRO-203ENST00000442921 FGFR1OPO95684 399 aaKnown RBP5.65□□□□□ -1.5
PTPRO-203ENST00000442921 PDCP20941 246 aa5.65□□□□□ -1.5
PTPRO-203ENST00000442921 GCKP35557 465 aa5.65□□□□□ -1.5
PTPRO-203ENST00000442921 TOB2Q14106 344 aaPredicted RBP5.65□□□□□ -1.5
PTPRO-203ENST00000442921 INPP5AQ14642 412 aa5.65□□□□□ -1.5
PTPRO-203ENST00000442921 ANKRD1Q15327 319 aa5.65□□□□□ -1.5
PTPRO-203ENST00000442921 LRRC23Q53EV4 343 aaPredicted RBP5.65□□□□□ -1.5
PTPRO-203ENST00000442921 LRP10Q7Z4F1 713 aa5.65□□□□□ -1.5
PTPRO-203ENST00000442921 VN1R5Q7Z5H4 357 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms