RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 LRRC71Q8N4P6 559 aa13.68□□□□□ -0.22
SLC48A1-202ENST00000442892 SCLT1Q96NL6 688 aa13.68□□□□□ -0.22
SLC48A1-202ENST00000442892 SUGCTQ9HAC7 445 aa13.68□□□□□ -0.22
SLC48A1-202ENST00000442892 AKT3Q9Y243 479 aa13.68□□□□□ -0.22
SLC48A1-202ENST00000442892 PCDHA2Q9Y5H9 948 aa13.68□□□□□ -0.22
SLC48A1-202ENST00000442892 CDY2AQ9Y6F7 541 aa13.68□□□□□ -0.22
SLC48A1-202ENST00000442892 A0A1W2PPC1 479 aa13.67□□□□□ -0.22
SLC48A1-202ENST00000442892 ZBTB42B2RXF5 422 aa13.67□□□□□ -0.22
SLC48A1-202ENST00000442892 NBNO60934 754 aa13.67□□□□□ -0.22
SLC48A1-202ENST00000442892 C22orf31O95567 290 aa13.67□□□□□ -0.22
SLC48A1-202ENST00000442892 PFKMP08237 780 aa13.67□□□□□ -0.22
SLC48A1-202ENST00000442892 GHRP10912 638 aa13.67□□□□□ -0.22
SLC48A1-202ENST00000442892 MRPS6P82932 125 aaKnown RBP13.67□□□□□ -0.22
SLC48A1-202ENST00000442892 RBL2Q08999 1139 aa13.67□□□□□ -0.22
SLC48A1-202ENST00000442892 ZRSR1Q15695 479 aaKnown RBP13.67□□□□□ -0.22
SLC48A1-202ENST00000442892 ERMNQ8TAM6 284 aa13.67□□□□□ -0.22
SLC48A1-202ENST00000442892 CEP170P1Q96L14 293 aa13.67□□□□□ -0.22
SLC48A1-202ENST00000442892 MAP7D2Q96T17 732 aa13.67□□□□□ -0.22
SLC48A1-202ENST00000442892 ZSWIM4Q9H7M6 989 aa13.67□□□□□ -0.22
SLC48A1-202ENST00000442892 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.67□□□□□ -0.22
SLC48A1-202ENST00000442892 WRAP73Q9P2S5 460 aaPredicted RBP13.67□□□□□ -0.22
SLC48A1-202ENST00000442892 MICAL3Q7RTP6 2002 aa13.67□□□□□ -0.22
SLC48A1-202ENST00000442892 A0A087WWV3 80 aa13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 SMIM35A0A1B0GVV1 85 aa13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 CAND2O75155 1236 aa13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 PARNO95453 639 aaKnown RBP13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 VTNP04004 478 aa13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 IBSPP21815 317 aaPredicted RBP13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 TMOD1P28289 359 aa13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 YWHABP31946 246 aaKnown RBP13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 KCNJ6P48051 423 aa13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 NPEPPSP55786 919 aa13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 CEBPZQ03701 1054 aaKnown RBP13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 RESTQ13127 1097 aa13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 BECN1Q14457 450 aa13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 MBTPS1Q14703 1052 aa13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 FOXD4L6Q3SYB3 417 aaPredicted RBP13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 XKR9Q5GH70 373 aa13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 IER5Q5VY09 327 aa13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 EFCAB12Q6NXP0 572 aa13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 FAM173BQ6P4H8 233 aa13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 FOXD4L3Q6VB84 417 aaPredicted RBP13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 DTHD1Q6ZMT9 781 aa13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 ZNF668Q96K58 619 aaPredicted RBP13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 RAB34Q9BZG1 259 aa13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 LRWD1Q9UFC0 647 aa13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 MTMR6Q9Y217 621 aa13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 TRPV2Q9Y5S1 764 aa13.66□□□□□ -0.22
SLC48A1-202ENST00000442892 VWA3AA6NCI4 1184 aa13.65□□□□□ -0.22
SLC48A1-202ENST00000442892 SOX1O00570 391 aaPredicted RBP13.65□□□□□ -0.22
SLC48A1-202ENST00000442892 MAGEB2O15479 319 aa13.65□□□□□ -0.22
SLC48A1-202ENST00000442892 SLITRK3O94933 977 aa13.65□□□□□ -0.22
SLC48A1-202ENST00000442892 CHRNA1P02708 482 aa13.65□□□□□ -0.22
SLC48A1-202ENST00000442892 CCT6AP40227 531 aaKnown RBP13.65□□□□□ -0.22
SLC48A1-202ENST00000442892 POLGP54098 1239 aaPredicted RBP13.65□□□□□ -0.22
SLC48A1-202ENST00000442892 CNKSR3Q6P9H4 555 aa13.65□□□□□ -0.22
SLC48A1-202ENST00000442892 TRAF7Q6Q0C0 670 aa13.65□□□□□ -0.22
SLC48A1-202ENST00000442892 ANO5Q75V66 913 aa13.65□□□□□ -0.22
SLC48A1-202ENST00000442892 OTUD6AQ7L8S5 288 aa13.65□□□□□ -0.22
SLC48A1-202ENST00000442892 C4orf32Q8N8J7 132 aa13.65□□□□□ -0.22
SLC48A1-202ENST00000442892 NEK9Q8TD19 979 aa13.65□□□□□ -0.22
SLC48A1-202ENST00000442892 SNX29Q8TEQ0 813 aa13.65□□□□□ -0.22
SLC48A1-202ENST00000442892 LRCH3Q96II8 777 aa13.65□□□□□ -0.22
SLC48A1-202ENST00000442892 CYP26B1Q9NR63 512 aa13.65□□□□□ -0.22
SLC48A1-202ENST00000442892 CXXC1Q9P0U4 656 aaPredicted RBP13.65□□□□□ -0.22
SLC48A1-202ENST00000442892 SLC4A7Q9Y6M7 1214 aa13.65□□□□□ -0.22
SLC48A1-202ENST00000442892 PTPRSQ13332 1948 aa13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 PP2D1A8MPX8 630 aa13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 GRXCR1A8MXD5 290 aa13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 LAD1O00515 517 aa13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 ZBTB39O15060 712 aa13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 MED24O75448 989 aa13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 ATP2C1P98194 919 aaPredicted RBP13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 MGAT3Q09327 533 aa13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 SF3A1Q15459 793 aaKnown RBP13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 KIZQ2M2Z5 673 aa13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 HAUS3Q68CZ6 603 aa13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 POTEGQ6S5H5 508 aa13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 C4orf19Q8IY42 314 aa13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 KIAA0319LQ8IZA0 1049 aa13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 DBF4BQ8NFT6 615 aa13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 PIGOQ8TEQ8 1089 aa13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 NLRP7Q8WX94 980 aa13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 HERVK_113Q902F9 699 aa13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 SEPT8Q92599 483 aa13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 NIFKQ9BYG3 293 aaKnown RBP13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 IFIH1Q9BYX4 1025 aaKnown RBP13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 OSBPL7Q9BZF2 842 aa13.64□□□□□ -0.23
SLC48A1-202ENST00000442892 STBD1O95210 358 aa13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 CXCL10P02778 98 aa13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 RPLP2P05387 115 aaKnown RBP13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 CD52P31358 61 aa13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 DNM2P50570 870 aa13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 FXR2P51116 673 aaKnown RBP eCLIP13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 IKBKEQ14164 716 aa13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 LPIN1Q14693 890 aa13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 GPNMBQ14956 572 aa13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 TCTN1Q2MV58 587 aa13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 FAM26DQ5JW98 314 aa13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 KRT79Q5XKE5 535 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms