RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 KYNUQ16719 465 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 COQ7Q99807 217 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 EDEM3Q9BZQ6 932 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 WWP1Q9H0M0 922 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 ING2Q9H160 280 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 TRPV6Q9H1D0 765 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 RNPEPL1Q9HAU8 725 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 CYP4F11Q9HBI6 524 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 TLR7Q9NYK1 1049 aaKnown RBP11.05□□□□□ -0.64
LIN54-202ENST00000442461 ANKIB1Q9P2G1 1089 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 HAO1Q9UJM8 370 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 DBR1Q9UK59 544 aaKnown RBP11.05□□□□□ -0.64
LIN54-202ENST00000442461 SMG5Q9UPR3 1016 aaKnown RBP11.05□□□□□ -0.64
LIN54-202ENST00000442461 ARIH1Q9Y4X5 557 aaPredicted RBP11.05□□□□□ -0.64
LIN54-202ENST00000442461 TRIM49BA6NDI0 452 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 B2RBV5 119 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 TRAPPC3O43617 180 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 HSPA8P11142 646 aaKnown RBP11.05□□□□□ -0.64
LIN54-202ENST00000442461 PRLRP16471 622 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 RGS2P41220 211 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 TECP42680 631 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 LRRC63Q05C16 580 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 RASA3Q14644 834 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 KIAA1755Q5JYT7 1200 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 RHOT2Q8IXI1 618 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 SPATA17Q96L03 361 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 RANBP17Q9H2T7 1088 aaKnown RBP11.05□□□□□ -0.64
LIN54-202ENST00000442461 RXFP1Q9HBX9 757 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 UBN1Q9NPG3 1134 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 PANK4Q9NVE7 773 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 CCPG1Q9ULG6 757 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 TMA7Q9Y2S6 64 aaKnown RBP11.05□□□□□ -0.64
LIN54-202ENST00000442461 RNF103-CHMP3A0A140T963 221 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 TOM1O60784 492 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 VCAM1P19320 739 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 FGFR4P22455 802 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 KDSRQ06136 332 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 DDX42Q86XP3 938 aaKnown RBP eCLIP11.05□□□□□ -0.64
LIN54-202ENST00000442461 PYROXD1Q8WU10 500 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 TTC25Q96NG3 672 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 SAYSD1Q9NPB0 183 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 R3HDM2Q9Y2K5 976 aaKnown RBP11.05□□□□□ -0.64
LIN54-202ENST00000442461 SNX5Q9Y5X3 404 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 HOXA7P31268 230 aaPredicted RBP11.04□□□□□ -0.64
LIN54-202ENST00000442461 ZAP70P43403 619 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 STAT4Q14765 748 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 COL23A1Q86Y22 540 aaPredicted RBP11.04□□□□□ -0.64
LIN54-202ENST00000442461 SLC17A8Q8NDX2 589 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 NSL1Q96IY1 281 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 CEP19Q96LK0 163 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 AK8Q96MA6 479 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 EYA1Q99502 592 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 FAM47DPA6NHR8 397 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 COPEO14579 308 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 AFPP02771 609 aaKnown RBP11.04□□□□□ -0.64
LIN54-202ENST00000442461 SLC1A4P43007 532 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 SERPINB10P48595 397 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 TSPY1Q01534 308 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 KCTD21Q4G0X4 260 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 PPP2R3CQ969Q6 453 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 TRIM11Q96F44 468 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 SH3GL1Q99961 368 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 METTL22Q9BUU2 404 aaPredicted RBP11.04□□□□□ -0.64
LIN54-202ENST00000442461 NPHS2Q9NP85 383 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 ADGRL2O95490 1459 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 WDR7Q9Y4E6 1490 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 ABCA5Q8WWZ7 1642 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 OPLAHO14841 1288 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 LSM1O15116 133 aaKnown RBP11.04□□□□□ -0.64
LIN54-202ENST00000442461 NR2F2P24468 414 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 GCKRQ14397 625 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 JADE1Q6IE81 842 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 IZUMO2Q6UXV1 221 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 AENQ8WTP8 325 aaKnown RBP11.04□□□□□ -0.64
LIN54-202ENST00000442461 CDKL2Q92772 493 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 VTI1AQ96AJ9 217 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 DDX18Q9NVP1 670 aaKnown RBP11.04□□□□□ -0.64
LIN54-202ENST00000442461 MCM9Q9NXL9 1143 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 SH3GLB1Q9Y371 365 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 GFPT2O94808 682 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 ENO1P06733 434 aaKnown RBP11.04□□□□□ -0.64
LIN54-202ENST00000442461 NUP107P57740 925 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 BLMHQ13867 455 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 C16orf72Q14CZ0 275 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 KAZNQ674X7 775 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 TMC5Q6UXY8 1006 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 GPBP1Q86WP2 473 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 CROCCP3Q8IVE0 287 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 TMCO5AQ8N6Q1 288 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 CASKIN2Q8WXE0 1202 aa11.04□□□□□ -0.64
LIN54-202ENST00000442461 RBM41Q96IZ5 413 aaKnown RBP11.04□□□□□ -0.64
LIN54-202ENST00000442461 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.04□□□□□ -0.64
LIN54-202ENST00000442461 ACEP12821 1306 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 ARHGAP31Q2M1Z3 1444 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 NBPF26B4DH59 902 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 LAD1O00515 517 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 KRT37O76014 449 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 PDIK1LQ8N165 341 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 NBPF15Q8N660 670 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 KDM3AQ9Y4C1 1321 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms