RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 GSPT1P15170 499 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 FOSL1P15407 271 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 S100A1P23297 94 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 ERCC5P28715 1186 aaPredicted RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 PCYT1AP49585 367 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 AARSP49588 968 aaKnown RBP eCLIP3.02□□□□□ -1.93
LIG4-203ENST00000442234 ITIH3Q06033 890 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 CWF19L2Q2TBE0 894 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 SMUG1Q53HV7 270 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 HSP90AA4PQ58FG1 418 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 ATL3Q6DD88 541 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 CCDC174Q6PII3 467 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 TRIM65Q6PJ69 517 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 OTUD6AQ7L8S5 288 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 CHST3Q7LGC8 479 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 ZC3H18Q86VM9 953 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 CRACR2BQ8N4Y2 399 aaPredicted RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 DCLK2Q8N568 766 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 CCDC197Q8NCU1 140 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 KCNG4Q8TDN1 519 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 HDAC7Q8WUI4 952 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 CPLX3Q8WVH0 158 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 CYFIP2Q96F07 1278 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 VMP1Q96GC9 406 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 XAGE2Q96GT9 111 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 ZNF570Q96NI8 536 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 CATSPER2Q96P56 530 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 NECAB3Q96P71 396 aaPredicted RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 CENPKQ9BS16 269 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 EBF2Q9HAK2 575 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 CNGB3Q9NQW8 809 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 IGSF5Q9NSI5 407 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 FAM217BQ9NTX9 383 aaPredicted RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 SPO11Q9Y5K1 396 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 GMEB1Q9Y692 573 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 ARHGAP23Q9P227 1491 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 NALCNQ8IZF0 1738 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 LINC00854A0A1B0GVQ3 168 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 CFAP73A6NFT4 308 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 TSPY2A6NKD2 308 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 SFI1A8K8P3 1242 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 HGSO14964 777 aaPredicted RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 B3GALNT1O75752 331 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 PRPF6O94906 941 aaKnown RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 APOEP02649 317 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 GSTA2P09210 222 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 TSPY3P0CV98 308 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 TSPY8P0CW00 308 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 PYGMP11217 842 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 SKIP12755 728 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 KCNA3P22001 575 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 CETN2P41208 172 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 RAD23BP54727 409 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 TSPY1Q01534 308 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 NBPF12Q5TAG4 269 aaPredicted RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 KLC3Q6P597 504 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 INTS5Q6P9B9 1019 aaKnown RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 FAM228AQ86W67 206 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 ERICH1Q86X53 443 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 ANKRD13AQ8IZ07 590 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 ZNF713Q8N859 430 aaPredicted RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 FSIP1Q8NA03 581 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 GABPB2Q8TAK5 448 aaPredicted RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 SSH1Q8WYL5 1049 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 AGBL1Q96MI9 1066 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 TRAPPC9Q96Q05 1148 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 CARD14Q9BXL6 1004 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 NACAP1Q9BZK3 213 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 SENP6Q9GZR1 1112 aaPredicted RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 PALMDQ9NP74 551 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 KCND1Q9NSA2 647 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 ARHGEF38Q9NXL2 777 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 ATP6V0A2Q9Y487 856 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 NUP188Q5SRE5 1749 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 TET3O43151 1660 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 ITIH6Q6UXX5 1313 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 FAM86C2PA6NEL3 165 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 LRRC10BA6NIK2 292 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 H0Y3Z8 333 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 PDLIM1O00151 329 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 BACH1O14867 736 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 SLC27A2O14975 620 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 PER1O15534 1290 aaPredicted RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 PFKFB2O60825 505 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 CHGBP05060 677 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 BDNFP23560 247 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 VAV2P52735 878 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 ADARP55265 1226 aaKnown RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 RPS8P62241 208 aaKnown RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 SP3Q02447 781 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 ITGB3BPQ13352 177 aaPredicted RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 MTX1Q13505 466 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 RCN2Q14257 317 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 CLUL1Q15846 466 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 NCAPH2Q6IBW4 605 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 C1orf228Q6PIY5 440 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 CYP26C1Q6V0L0 522 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 PACS1Q6VY07 963 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 EEPD1Q7L9B9 569 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 C11orf74Q86VG3 221 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms