RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 PPP2R2CQ9Y2T4 447 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 RNF225M0QZC1 329 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 STX10O60499 249 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 PLA2G6O60733 806 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 ZNF286BP0CG31 522 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 PNMA6AP0CW24 399 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 POSTNQ15063 836 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 ZNF174Q15697 407 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 PTGISQ16647 500 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 MTERF2Q49AM1 385 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 DUSP28Q4G0W2 176 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 XKR9Q5GH70 373 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 KRT79Q5XKE5 535 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 SWSAP1Q6NVH7 229 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 NEK8Q86SG6 692 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 LRRC15Q8TF66 581 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 MAP3K20Q9NYL2 800 aaKnown RBP8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 MTUS1Q9ULD2 1270 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 SYNGAP1Q96PV0 1343 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 DENND3A2RUS2 1198 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 H0YGN5 161 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 PRPF3O43395 683 aaKnown RBP8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 POLGP54098 1239 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 CYP4A11Q02928 519 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 PPIGQ13427 754 aaKnown RBP eCLIP8.17□□□□□ -1.12e-7■■■□□ 16.3
CDC42BPA-208ENST00000442054 CALCRLQ16602 461 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 ODR4Q5SWX8 454 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 PRPF38BQ5VTL8 546 aaKnown RBP8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 BTNL9Q6UXG8 535 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 CREBRFQ8IUR6 639 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 GRAMD1CQ8IYS0 662 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 SLC7A3Q8WY07 619 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 CALML4Q96GE6 196 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 FAM193BQ96PV7 902 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 PCDHA12Q9UN75 941 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 SSC5DA1L4H1 1573 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 SOWAHBA6NEL2 793 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 IPO5O00410 1097 aaKnown RBP8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 ARHGAP6O43182 974 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 PPFIA4O75335 1185 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 HOXC6P09630 235 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 TGFB3P10600 412 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 SFPQP23246 707 aaKnown RBP eCLIP8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 UBASH3AP57075 661 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 SLC35G1Q2M3R5 365 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 MORN1Q5T089 497 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 GALNT17Q6IS24 598 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 NLRP7Q8WX94 980 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 BICD1Q96G01 975 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 TBC1D22BQ9NU19 505 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 ERAP1Q9NZ08 941 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 SERTAD1Q9UHV2 236 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 DNAI1Q9UI46 699 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 SLC4A7Q9Y6M7 1214 aa8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 COL2A1P02458 1487 aaPredicted RBP8.17□□□□□ -1.1
CDC42BPA-208ENST00000442054 ADGRA2Q96PE1 1338 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 ARHGEF35A5YM69 484 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 MAP2K7O14733 419 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 FGBP02675 491 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 CAPN2P17655 700 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 ERCC5P28715 1186 aaPredicted RBP8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 FPGSQ05932 587 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 ISM2Q6H9L7 571 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 XRRA1Q6P2D8 792 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 RAD9BQ6WBX8 426 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 HACE1Q8IYU2 909 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 PANX2Q96RD6 677 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 JPH2Q9BR39 696 aaPredicted RBP8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 CSRNP2Q9H175 543 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 TSPYL2Q9H2G4 693 aaPredicted RBP8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 ZNF302Q9NR11 478 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 SAMSN1Q9NSI8 373 aaKnown RBP8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 IGKV6D-41A0A0C4DH26 115 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 EFCAB8A8MWE9 144 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 STAM2O75886 525 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 ACRP10323 421 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 PSEN2P49810 448 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 RNASELQ05823 741 aaKnown RBP8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 TMEM62Q0P6H9 643 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 PFKFB3Q16875 520 aaPredicted RBP8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 NBPF20Q3BBV1 942 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 IER5Q5VY09 327 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 SAMD3Q8N6K7 520 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 FAM133AQ8N9E0 248 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 MLKLQ8NB16 471 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 ZNF668Q96K58 619 aaPredicted RBP8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 BARHL2Q9NY43 387 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 PCDHA4Q9UN74 947 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 ROBO3Q96MS0 1386 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 ITIH6Q6UXX5 1313 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 CNTNAP5Q8WYK1 1306 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 MAFGO15525 162 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 TEX33O43247 280 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 ABL1P00519 1130 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 RFX1P22670 979 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 TCF7P36402 384 aaPredicted RBP8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 ARHGAP25P42331 645 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 KRT76Q01546 638 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 MFSD10Q14728 455 aa8.16□□□□□ -1.1
CDC42BPA-208ENST00000442054 MTF1Q14872 753 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms