RNA–Protein interactions for RNA: ENST00000441892.6

CDH17-202, Transcript of cadherin 17, humanhuman

TSL 2 BASIC

Gene CDH17, Length 2,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-202ENST00000441892 SF3A3Q12874 501 aaKnown RBP eCLIP8.59□□□□□ -1.03
CDH17-202ENST00000441892 RCN2Q14257 317 aa8.59□□□□□ -1.03
CDH17-202ENST00000441892 KPNB1Q14974 876 aaKnown RBP8.59□□□□□ -1.03
CDH17-202ENST00000441892 GSTA3Q16772 222 aa8.59□□□□□ -1.03
CDH17-202ENST00000441892 ILDR2Q71H61 639 aa8.59□□□□□ -1.03
CDH17-202ENST00000441892 COL23A1Q86Y22 540 aaPredicted RBP8.59□□□□□ -1.03
CDH17-202ENST00000441892 C2CD5Q86YS7 1000 aa8.59□□□□□ -1.03
CDH17-202ENST00000441892 STAG2Q8N3U4 1231 aa8.59□□□□□ -1.03
CDH17-202ENST00000441892 SEC14L1Q92503 715 aa8.59□□□□□ -1.03
CDH17-202ENST00000441892 SLC26A6Q9BXS9 759 aa8.59□□□□□ -1.03
CDH17-202ENST00000441892 PPP1R12CQ9BZL4 782 aa8.59□□□□□ -1.03
CDH17-202ENST00000441892 MTFR1LQ9H019 292 aa8.59□□□□□ -1.03
CDH17-202ENST00000441892 STMN4Q9H169 189 aaPredicted RBP8.59□□□□□ -1.03
CDH17-202ENST00000441892 BLZF1Q9H2G9 400 aa8.59□□□□□ -1.03
CDH17-202ENST00000441892 DCLRE1BQ9H816 532 aa8.59□□□□□ -1.03
CDH17-202ENST00000441892 NMRK1Q9NWW6 199 aa8.59□□□□□ -1.03
CDH17-202ENST00000441892 PRKAG3Q9UGI9 489 aa8.59□□□□□ -1.03
CDH17-202ENST00000441892 TRIM33Q9UPN9 1127 aa8.59□□□□□ -1.03
CDH17-202ENST00000441892 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.59□□□□□ -1.03
CDH17-202ENST00000441892 DISP2A7MBM2 1401 aa8.59□□□□□ -1.03
CDH17-202ENST00000441892 GLI3P10071 1580 aa8.59□□□□□ -1.03
CDH17-202ENST00000441892 GOLGA8AA7E2F4 631 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 RBAK-RBAKDNI3L0D1 243 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 FOXP2O15409 715 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 TPD52L2O43399 206 aaKnown RBP8.58□□□□□ -1.04
CDH17-202ENST00000441892 ECE2O60344 883 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 PALMO75781 387 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 RPN1P04843 607 aaKnown RBP8.58□□□□□ -1.04
CDH17-202ENST00000441892 IFNAR1P17181 557 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 PTGER2P43116 358 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 RFX5P48382 616 aaPredicted RBP8.58□□□□□ -1.04
CDH17-202ENST00000441892 KLK7P49862 253 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 PHEXP78562 749 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 PTPN12Q05209 780 aaKnown RBP8.58□□□□□ -1.04
CDH17-202ENST00000441892 SULT2A1Q06520 285 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 CBX3Q13185 183 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 RNF43Q68DV7 783 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 MICU3Q86XE3 530 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 DDX42Q86XP3 938 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDH17-202ENST00000441892 CCNJLQ8IV13 435 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 ZSCAN29Q8IWY8 852 aaPredicted RBP8.58□□□□□ -1.04
CDH17-202ENST00000441892 LRRC43Q8N309 656 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 USHBP1Q8N6Y0 703 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 SLC17A8Q8NDX2 589 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 INPP5DQ92835 1189 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 ZNF653Q96CK0 615 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 HIC2Q96JB3 615 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 TRIM47Q96LD4 638 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 DDX23Q9BUQ8 820 aaKnown RBP8.58□□□□□ -1.04
CDH17-202ENST00000441892 TXLNGYQ9BZA5 131 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 LUC7LQ9NQ29 371 aaKnown RBP8.58□□□□□ -1.04
CDH17-202ENST00000441892 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDH17-202ENST00000441892 SPATA7Q9P0W8 599 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 TUBGCP4Q9UGJ1 667 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 COL5A2P05997 1499 aaPredicted RBP8.58□□□□□ -1.04
CDH17-202ENST00000441892 SSU72P8A0A1W2PR75 194 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 TRIM49BA6NDI0 452 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 CCDC188H7C350 402 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 RGS16O15492 202 aaPredicted RBP8.58□□□□□ -1.04
CDH17-202ENST00000441892 ATP9AO75110 1047 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 DDX58O95786 925 aaKnown RBP8.58□□□□□ -1.04
CDH17-202ENST00000441892 AFPP02771 609 aaKnown RBP8.58□□□□□ -1.04
CDH17-202ENST00000441892 IDO1P14902 403 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 ZFXP17010 805 aaPredicted RBP8.58□□□□□ -1.04
CDH17-202ENST00000441892 GM2AP17900 193 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 RXRAP19793 462 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 HOXC9P31274 260 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 CLK2P49760 499 aaKnown RBP8.58□□□□□ -1.04
CDH17-202ENST00000441892 CNGA2Q16280 664 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 ASTE1Q2TB18 679 aaPredicted RBP8.58□□□□□ -1.04
CDH17-202ENST00000441892 AKNAD1Q5T1N1 836 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 C6orf118Q5T5N4 469 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 PDXDC2PQ6P474 469 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 CCDC80Q76M96 950 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 EXOC3L1Q86VI1 746 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 SGMS1Q86VZ5 419 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 FAM13CQ8NE31 585 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 ACTRT1Q8TDG2 376 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 TAF4BQ92750 862 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 OSBP2Q969R2 916 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 TMEM87BQ96K49 555 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 NR1H4Q96RI1 486 aaPredicted RBP8.58□□□□□ -1.04
CDH17-202ENST00000441892 DPH5Q9H2P9 285 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 SLITRK6Q9H5Y7 841 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 RHBDL2Q9NX52 303 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 USP20Q9Y2K6 914 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 ATRNO75882 1429 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 MYH7P12883 1935 aa8.58□□□□□ -1.04
CDH17-202ENST00000441892 MYH13Q9UKX3 1938 aa8.57□□□□□ -1.04
CDH17-202ENST00000441892 PSMA7O14818 248 aa8.57□□□□□ -1.04
CDH17-202ENST00000441892 DAPK3O43293 454 aa8.57□□□□□ -1.04
CDH17-202ENST00000441892 GNA14O95837 355 aa8.57□□□□□ -1.04
CDH17-202ENST00000441892 RASA1P20936 1047 aa8.57□□□□□ -1.04
CDH17-202ENST00000441892 NR5A1Q13285 461 aa8.57□□□□□ -1.04
CDH17-202ENST00000441892 ACVR2BQ13705 512 aa8.57□□□□□ -1.04
CDH17-202ENST00000441892 MAP7Q14244 749 aa8.57□□□□□ -1.04
CDH17-202ENST00000441892 NAB2Q15742 525 aa8.57□□□□□ -1.04
CDH17-202ENST00000441892 KBTBD12Q3ZCT8 623 aa8.57□□□□□ -1.04
CDH17-202ENST00000441892 CCDC92Q53HC0 331 aaPredicted RBP8.57□□□□□ -1.04
CDH17-202ENST00000441892 TAOK1Q7L7X3 1001 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms