RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 NRAPQ86VF7 1730 aa22.07■■□□□ 1.12
SHOX2-203ENST00000441443 GNAQP50148 359 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 CACNB1Q02641 598 aaPredicted RBP22.06■■□□□ 1.12
SHOX2-203ENST00000441443 COASYQ13057 564 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 CALCRLQ16602 461 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 ALKBH5Q6P6C2 394 aaKnown RBP22.06■■□□□ 1.12
SHOX2-203ENST00000441443 ARHGAP27Q6ZUM4 889 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 TRPM8Q7Z2W7 1104 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 DGKHQ86XP1 1220 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 ATXN2LQ8WWM7 1075 aaKnown RBP22.06■■□□□ 1.12
SHOX2-203ENST00000441443 GANQ9H2C0 597 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 SAMD15Q9P1V8 674 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 NAGPAQ9UK23 515 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 CD2APQ9Y5K6 639 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 PIGWQ7Z7B1 504 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 PROM2Q8N271 834 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 PRCCQ92733 491 aaPredicted RBP22.06■■□□□ 1.12
SHOX2-203ENST00000441443 RPGRQ92834 1020 aaKnown RBP22.06■■□□□ 1.12
SHOX2-203ENST00000441443 SPAG5Q96R06 1193 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 ADAM7Q9H2U9 754 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 ARPP21Q9UBL0 812 aaPredicted RBP22.06■■□□□ 1.12
SHOX2-203ENST00000441443 KLRF2D3W0D1 207 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 SLC37A4O43826 429 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 SLC9A1P19634 815 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 PRPF4BQ13523 1007 aaKnown RBP22.06■■□□□ 1.12
SHOX2-203ENST00000441443 BZW1Q7L1Q6 419 aaKnown RBP22.06■■□□□ 1.12
SHOX2-203ENST00000441443 IRF2BP2Q7Z5L9 587 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 TRIM59Q8IWR1 403 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 LMBR1Q8WVP7 490 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 CENPTQ96BT3 561 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 UIMC1Q96RL1 719 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 AZI2Q9H6S1 392 aa22.06■■□□□ 1.12
SHOX2-203ENST00000441443 DIAPH2O60879 1101 aa22.05■■□□□ 1.12
SHOX2-203ENST00000441443 FGGP02679 453 aa22.05■■□□□ 1.12
SHOX2-203ENST00000441443 TSPY3P0CV98 308 aa22.05■■□□□ 1.12
SHOX2-203ENST00000441443 TSPY8P0CW00 308 aa22.05■■□□□ 1.12
SHOX2-203ENST00000441443 UBAP2Q5T6F2 1119 aaKnown RBP22.05■■□□□ 1.12
SHOX2-203ENST00000441443 ATP8B4Q8TF62 1192 aa22.05■■□□□ 1.12
SHOX2-203ENST00000441443 GJA10Q969M2 543 aa22.05■■□□□ 1.12
SHOX2-203ENST00000441443 SLITRK6Q9H5Y7 841 aa22.05■■□□□ 1.12
SHOX2-203ENST00000441443 FAM114A2Q9NRY5 505 aa22.05■■□□□ 1.12
SHOX2-203ENST00000441443 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.05■■□□□ 1.12
SHOX2-203ENST00000441443 SPDYE3A6NKU9 549 aa22.05■■□□□ 1.12
SHOX2-203ENST00000441443 UFL1O94874 794 aa22.05■■□□□ 1.12
SHOX2-203ENST00000441443 ECM1Q16610 540 aa22.05■■□□□ 1.12
SHOX2-203ENST00000441443 RC3H1Q5TC82 1133 aaKnown RBP22.05■■□□□ 1.12
SHOX2-203ENST00000441443 TRPC6Q9Y210 931 aa22.05■■□□□ 1.12
SHOX2-203ENST00000441443 ASAP2O43150 1006 aa22.04■■□□□ 1.12
SHOX2-203ENST00000441443 PPFIA2O75334 1257 aa22.04■■□□□ 1.12
SHOX2-203ENST00000441443 TDP2O95551 362 aa22.04■■□□□ 1.12
SHOX2-203ENST00000441443 IFI16Q16666 785 aaKnown RBP22.04■■□□□ 1.12
SHOX2-203ENST00000441443 CRELD2Q6UXH1 353 aaPredicted RBP22.04■■□□□ 1.12
SHOX2-203ENST00000441443 HOOK3Q86VS8 718 aa22.04■■□□□ 1.12
SHOX2-203ENST00000441443 EPB41L4BQ9H329 900 aa22.04■■□□□ 1.12
SHOX2-203ENST00000441443 C6orf50Q9HD87 102 aa22.04■■□□□ 1.12
SHOX2-203ENST00000441443 INTS9Q9NV88 658 aaKnown RBP22.04■■□□□ 1.12
SHOX2-203ENST00000441443 UBOX5O94941 541 aa22.04■■□□□ 1.12
SHOX2-203ENST00000441443 KCNH2Q12809 1159 aa22.04■■□□□ 1.12
SHOX2-203ENST00000441443 FAM26FQ5R3K3 315 aa22.04■■□□□ 1.12
SHOX2-203ENST00000441443 SPTY2D1Q68D10 685 aaPredicted RBP22.04■■□□□ 1.12
SHOX2-203ENST00000441443 ZNF570Q96NI8 536 aa22.04■■□□□ 1.12
SHOX2-203ENST00000441443 CCDC113Q9H0I3 377 aa22.04■■□□□ 1.12
SHOX2-203ENST00000441443 GSTA1P08263 222 aa22.04■■□□□ 1.12
SHOX2-203ENST00000441443 SLCO1A2P46721 670 aa22.04■■□□□ 1.12
SHOX2-203ENST00000441443 EIF3BP55884 814 aaKnown RBP22.04■■□□□ 1.12
SHOX2-203ENST00000441443 ITIH4Q14624 930 aa22.04■■□□□ 1.12
SHOX2-203ENST00000441443 ZNF444Q8N0Y2 327 aaPredicted RBP22.04■■□□□ 1.12
SHOX2-203ENST00000441443 GLG1Q92896 1179 aa22.04■■□□□ 1.12
SHOX2-203ENST00000441443 KIF9Q9HAQ2 790 aa22.04■■□□□ 1.12
SHOX2-203ENST00000441443 A0A1B0GUL6 1792 aa22.03■■□□□ 1.12
SHOX2-203ENST00000441443 A8MUI8 341 aa22.03■■□□□ 1.12
SHOX2-203ENST00000441443 BTNL10A8MVZ5 291 aa22.03■■□□□ 1.12
SHOX2-203ENST00000441443 MMP13P45452 471 aa22.03■■□□□ 1.12
SHOX2-203ENST00000441443 PLTPP55058 493 aa22.03■■□□□ 1.12
SHOX2-203ENST00000441443 MTMR9Q96QG7 549 aa22.03■■□□□ 1.12
SHOX2-203ENST00000441443 SOGA3Q5TF21 947 aa22.03■■□□□ 1.12
SHOX2-203ENST00000441443 SPICE1Q8N0Z3 855 aa22.03■■□□□ 1.12
SHOX2-203ENST00000441443 RASGEF1CQ8N431 466 aa22.03■■□□□ 1.12
SHOX2-203ENST00000441443 KIF2BQ8N4N8 673 aa22.03■■□□□ 1.12
SHOX2-203ENST00000441443 SEC14L1Q92503 715 aa22.03■■□□□ 1.12
SHOX2-203ENST00000441443 RNF25Q96BH1 459 aaPredicted RBP22.03■■□□□ 1.12
SHOX2-203ENST00000441443 L3MBTL3Q96JM7 780 aaPredicted RBP22.03■■□□□ 1.12
SHOX2-203ENST00000441443 TMEM47Q9BQJ4 181 aa22.03■■□□□ 1.12
SHOX2-203ENST00000441443 EIF4E1BA6NMX2 242 aaKnown RBP22.02■■□□□ 1.12
SHOX2-203ENST00000441443 ALDH5A1P51649 535 aaPredicted RBP22.02■■□□□ 1.12
SHOX2-203ENST00000441443 PSMD2Q13200 908 aa22.02■■□□□ 1.12
SHOX2-203ENST00000441443 RIPK1Q13546 671 aa22.02■■□□□ 1.12
SHOX2-203ENST00000441443 GRAPQ13588 217 aa22.02■■□□□ 1.12
SHOX2-203ENST00000441443 GRAPLQ8TC17 118 aaPredicted RBP22.02■■□□□ 1.12
SHOX2-203ENST00000441443 DNAJC19Q96DA6 116 aa22.02■■□□□ 1.12
SHOX2-203ENST00000441443 TXLNGYQ9BZA5 131 aa22.02■■□□□ 1.12
SHOX2-203ENST00000441443 LRRC4BQ9NT99 713 aa22.02■■□□□ 1.12
SHOX2-203ENST00000441443 EME2A4GXA9 379 aaPredicted RBP22.02■■□□□ 1.12
SHOX2-203ENST00000441443 PALM3A6NDB9 673 aaPredicted RBP22.02■■□□□ 1.12
SHOX2-203ENST00000441443 RGS16O15492 202 aaPredicted RBP22.02■■□□□ 1.12
SHOX2-203ENST00000441443 PMS2P54278 862 aa22.02■■□□□ 1.12
SHOX2-203ENST00000441443 IRX1P78414 480 aaPredicted RBP22.02■■□□□ 1.12
SHOX2-203ENST00000441443 GRIK3Q13003 919 aa22.02■■□□□ 1.12
SHOX2-203ENST00000441443 ZKSCAN8Q15776 578 aaPredicted RBP22.02■■□□□ 1.12
SHOX2-203ENST00000441443 KRT79Q5XKE5 535 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms