RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-213ENST00000440293 FOXP1Q9H334 677 aaPredicted RBP20.4■□□□□ 0.86
HDAC7-213ENST00000440293 PTPRSQ13332 1948 aa20.39■□□□□ 0.86
HDAC7-213ENST00000440293 IGKV6D-21A0A0A0MT36 114 aa20.39■□□□□ 0.85
HDAC7-213ENST00000440293 FAM205CA6NFA0 338 aa20.39■□□□□ 0.85
HDAC7-213ENST00000440293 BACH1O14867 736 aa20.39■□□□□ 0.85
HDAC7-213ENST00000440293 GAS7O60861 476 aa20.39■□□□□ 0.85
HDAC7-213ENST00000440293 ZNF200P98182 395 aaPredicted RBP20.39■□□□□ 0.85
HDAC7-213ENST00000440293 LRCH2Q5VUJ6 765 aa20.39■□□□□ 0.85
HDAC7-213ENST00000440293 FAM160B1Q5W0V3 765 aa20.39■□□□□ 0.85
HDAC7-213ENST00000440293 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.39■□□□□ 0.85
HDAC7-213ENST00000440293 SEPT8Q92599 483 aa20.39■□□□□ 0.85
HDAC7-213ENST00000440293 APBB2Q92870 758 aa20.39■□□□□ 0.85
HDAC7-213ENST00000440293 TOP1MTQ969P6 601 aa20.39■□□□□ 0.85
HDAC7-213ENST00000440293 FAM20AQ96MK3 541 aa20.39■□□□□ 0.85
HDAC7-213ENST00000440293 SETD4Q9NVD3 440 aa20.39■□□□□ 0.85
HDAC7-213ENST00000440293 SMC3Q9UQE7 1217 aa20.39■□□□□ 0.85
HDAC7-213ENST00000440293 PCDHA10Q9Y5I2 948 aa20.39■□□□□ 0.85
HDAC7-213ENST00000440293 NRCAMQ92823 1304 aa20.38■□□□□ 0.85
HDAC7-213ENST00000440293 PSMD10O75832 226 aa20.38■□□□□ 0.85
HDAC7-213ENST00000440293 PSAPP07602 524 aa20.38■□□□□ 0.85
HDAC7-213ENST00000440293 MARK3P27448 753 aa20.38■□□□□ 0.85
HDAC7-213ENST00000440293 GJB2P29033 226 aa20.38■□□□□ 0.85
HDAC7-213ENST00000440293 SLC26A2P50443 739 aa20.38■□□□□ 0.85
HDAC7-213ENST00000440293 CUL4AQ13619 759 aa20.38■□□□□ 0.85
HDAC7-213ENST00000440293 GNL2Q13823 731 aaKnown RBP20.38■□□□□ 0.85
HDAC7-213ENST00000440293 HIC1Q14526 733 aa20.38■□□□□ 0.85
HDAC7-213ENST00000440293 SWSAP1Q6NVH7 229 aa20.38■□□□□ 0.85
HDAC7-213ENST00000440293 FAM178BQ8IXR5 827 aa20.38■□□□□ 0.85
HDAC7-213ENST00000440293 ZNF302Q9NR11 478 aa20.38■□□□□ 0.85
HDAC7-213ENST00000440293 MTUS1Q9ULD2 1270 aa20.38■□□□□ 0.85
HDAC7-213ENST00000440293 SAMM50Q9Y512 469 aa20.38■□□□□ 0.85
HDAC7-213ENST00000440293 H3BNC9 293 aa20.37■□□□□ 0.85
HDAC7-213ENST00000440293 TBX3O15119 743 aa20.37■□□□□ 0.85
HDAC7-213ENST00000440293 SLC37A4O43826 429 aa20.37■□□□□ 0.85
HDAC7-213ENST00000440293 MARCH6O60337 910 aa20.37■□□□□ 0.85
HDAC7-213ENST00000440293 TIGD5Q53EQ6 642 aa20.37■□□□□ 0.85
HDAC7-213ENST00000440293 MYOCDQ8IZQ8 938 aa20.37■□□□□ 0.85
HDAC7-213ENST00000440293 ETNPPLQ8TBG4 499 aa20.37■□□□□ 0.85
HDAC7-213ENST00000440293 GJA10Q969M2 543 aa20.37■□□□□ 0.85
HDAC7-213ENST00000440293 DISC1Q9NRI5 854 aa20.37■□□□□ 0.85
HDAC7-213ENST00000440293 COL4A4P53420 1690 aaPredicted RBP20.37■□□□□ 0.85
HDAC7-213ENST00000440293 COL4A6Q14031 1691 aa20.37■□□□□ 0.85
HDAC7-213ENST00000440293 WDR64B1ANS9 1081 aa20.36■□□□□ 0.85
HDAC7-213ENST00000440293 NCK2O43639 380 aa20.36■□□□□ 0.85
HDAC7-213ENST00000440293 BAG4O95429 457 aaKnown RBP20.36■□□□□ 0.85
HDAC7-213ENST00000440293 ALADP13716 330 aa20.36■□□□□ 0.85
HDAC7-213ENST00000440293 SFNP31947 248 aa20.36■□□□□ 0.85
HDAC7-213ENST00000440293 JAK3P52333 1124 aa20.36■□□□□ 0.85
HDAC7-213ENST00000440293 PPFIA1Q13136 1202 aa20.36■□□□□ 0.85
HDAC7-213ENST00000440293 EPC2Q52LR7 807 aa20.36■□□□□ 0.85
HDAC7-213ENST00000440293 FAM26DQ5JW98 314 aa20.36■□□□□ 0.85
HDAC7-213ENST00000440293 PDXDC2PQ6P474 469 aa20.36■□□□□ 0.85
HDAC7-213ENST00000440293 GJD3Q8N144 294 aa20.36■□□□□ 0.85
HDAC7-213ENST00000440293 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.36■□□□□ 0.85
HDAC7-213ENST00000440293 NEK9Q8TD19 979 aa20.36■□□□□ 0.85
HDAC7-213ENST00000440293 C17orf80Q9BSJ5 609 aa20.36■□□□□ 0.85
HDAC7-213ENST00000440293 KCNMB3Q9NPA1 279 aa20.36■□□□□ 0.85
HDAC7-213ENST00000440293 FAM50BQ9Y247 325 aa20.36■□□□□ 0.85
HDAC7-213ENST00000440293 GRXCR2A6NFK2 248 aa20.35■□□□□ 0.85
HDAC7-213ENST00000440293 RRN3P2A6NIE6 340 aa20.35■□□□□ 0.85
HDAC7-213ENST00000440293 PRR33A8MZF0 331 aa20.35■□□□□ 0.85
HDAC7-213ENST00000440293 TREHO43280 583 aa20.35■□□□□ 0.85
HDAC7-213ENST00000440293 ADAM17P78536 824 aa20.35■□□□□ 0.85
HDAC7-213ENST00000440293 COL19A1Q14993 1142 aa20.35■□□□□ 0.85
HDAC7-213ENST00000440293 PLCB4Q15147 1175 aa20.35■□□□□ 0.85
HDAC7-213ENST00000440293 FAM117BQ6P1L5 589 aa20.35■□□□□ 0.85
HDAC7-213ENST00000440293 RPAINQ86UA6 219 aa20.35■□□□□ 0.85
HDAC7-213ENST00000440293 NOSTRINQ8IVI9 506 aa20.35■□□□□ 0.85
HDAC7-213ENST00000440293 CCDC60Q8IWA6 550 aaPredicted RBP20.35■□□□□ 0.85
HDAC7-213ENST00000440293 RDM1Q8NG50 284 aa20.35■□□□□ 0.85
HDAC7-213ENST00000440293 YME1L1Q96TA2 773 aa20.35■□□□□ 0.85
HDAC7-213ENST00000440293 UNC45AQ9H3U1 944 aa20.35■□□□□ 0.85
HDAC7-213ENST00000440293 C11orf16Q9NQ32 467 aa20.35■□□□□ 0.85
HDAC7-213ENST00000440293 TRPC6Q9Y210 931 aa20.35■□□□□ 0.85
HDAC7-213ENST00000440293 MAFBQ9Y5Q3 323 aaPredicted RBP20.35■□□□□ 0.85
HDAC7-213ENST00000440293 SIP14410 1827 aa20.34■□□□□ 0.85
HDAC7-213ENST00000440293 POTEB3A0JP26 581 aa20.34■□□□□ 0.85
HDAC7-213ENST00000440293 CHMP2AO43633 222 aa20.34■□□□□ 0.85
HDAC7-213ENST00000440293 INSRRP14616 1297 aa20.34■□□□□ 0.85
HDAC7-213ENST00000440293 ATP2B1P20020 1258 aa20.34■□□□□ 0.85
HDAC7-213ENST00000440293 KCNA5P22460 613 aa20.34■□□□□ 0.85
HDAC7-213ENST00000440293 U2AF2P26368 475 aaKnown RBP eCLIP20.34■□□□□ 0.85
HDAC7-213ENST00000440293 GRIK4Q16099 956 aa20.34■□□□□ 0.85
HDAC7-213ENST00000440293 POTEBQ6S5H4 581 aa20.34■□□□□ 0.85
HDAC7-213ENST00000440293 B3GNT9Q6UX72 402 aa20.34■□□□□ 0.85
HDAC7-213ENST00000440293 MIER3Q7Z3K6 550 aa20.34■□□□□ 0.85
HDAC7-213ENST00000440293 SLFN12Q8IYM2 578 aa20.34■□□□□ 0.85
HDAC7-213ENST00000440293 LMBR1Q8WVP7 490 aa20.34■□□□□ 0.85
HDAC7-213ENST00000440293 HAS1Q92839 578 aa20.34■□□□□ 0.85
HDAC7-213ENST00000440293 SNX21Q969T3 373 aa20.34■□□□□ 0.85
HDAC7-213ENST00000440293 PABPC5Q96DU9 382 aaKnown RBP20.34■□□□□ 0.85
HDAC7-213ENST00000440293 CD320Q9NPF0 282 aa20.34■□□□□ 0.85
HDAC7-213ENST00000440293 GABBR1Q9UBS5 961 aa20.34■□□□□ 0.85
HDAC7-213ENST00000440293 PRKAG3Q9UGI9 489 aa20.34■□□□□ 0.85
HDAC7-213ENST00000440293 DOCK5Q9H7D0 1870 aa20.34■□□□□ 0.85
HDAC7-213ENST00000440293 H3BQV1 296 aa20.33■□□□□ 0.85
HDAC7-213ENST00000440293 K7ELQ4 463 aaPredicted RBP20.33■□□□□ 0.85
HDAC7-213ENST00000440293 HBP1O60381 514 aa20.33■□□□□ 0.85
HDAC7-213ENST00000440293 RB1P06400 928 aa20.33■□□□□ 0.85
HDAC7-213ENST00000440293 LARP1BQ659C4 914 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms