RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 IBSPP21815 317 aaPredicted RBP22.4■■□□□ 1.18
SHROOM1-204ENST00000440118 PRKCEQ02156 737 aa22.4■■□□□ 1.18
SHROOM1-204ENST00000440118 LETM2Q2VYF4 491 aa22.4■■□□□ 1.18
SHROOM1-204ENST00000440118 MIER3Q7Z3K6 550 aa22.4■■□□□ 1.18
SHROOM1-204ENST00000440118 NECAB1Q8N987 351 aa22.4■■□□□ 1.18
SHROOM1-204ENST00000440118 ATXN2LQ8WWM7 1075 aaKnown RBP22.4■■□□□ 1.18
SHROOM1-204ENST00000440118 GJA10Q969M2 543 aa22.4■■□□□ 1.18
SHROOM1-204ENST00000440118 IL17RAQ96F46 866 aa22.4■■□□□ 1.18
SHROOM1-204ENST00000440118 SAMD11Q96NU1 681 aa22.4■■□□□ 1.18
SHROOM1-204ENST00000440118 MAP7D2Q96T17 732 aa22.4■■□□□ 1.18
SHROOM1-204ENST00000440118 PPP1R16BQ96T49 567 aa22.4■■□□□ 1.18
SHROOM1-204ENST00000440118 C17orf80Q9BSJ5 609 aa22.4■■□□□ 1.18
SHROOM1-204ENST00000440118 PHF20Q9BVI0 1012 aa22.4■■□□□ 1.18
SHROOM1-204ENST00000440118 UNC45AQ9H3U1 944 aa22.4■■□□□ 1.18
SHROOM1-204ENST00000440118 AGO3Q9H9G7 860 aaKnown RBP22.4■■□□□ 1.18
SHROOM1-204ENST00000440118 SUGCTQ9HAC7 445 aa22.4■■□□□ 1.18
SHROOM1-204ENST00000440118 SQORQ9Y6N5 450 aa22.4■■□□□ 1.18
SHROOM1-204ENST00000440118 COL4A6Q14031 1691 aa22.39■■□□□ 1.18
SHROOM1-204ENST00000440118 MARCH6O60337 910 aa22.39■■□□□ 1.17
SHROOM1-204ENST00000440118 DTNBO60941 627 aa22.39■■□□□ 1.17
SHROOM1-204ENST00000440118 OATP04181 439 aa22.39■■□□□ 1.17
SHROOM1-204ENST00000440118 POU3F3P20264 500 aaPredicted RBP22.39■■□□□ 1.17
SHROOM1-204ENST00000440118 ATP4AP20648 1035 aa22.39■■□□□ 1.17
SHROOM1-204ENST00000440118 NFX1Q12986 1120 aaKnown RBP22.39■■□□□ 1.17
SHROOM1-204ENST00000440118 MOXD1Q6UVY6 613 aa22.39■■□□□ 1.17
SHROOM1-204ENST00000440118 FIBCD1Q8N539 461 aa22.39■■□□□ 1.17
SHROOM1-204ENST00000440118 SP7Q8TDD2 431 aaPredicted RBP22.39■■□□□ 1.17
SHROOM1-204ENST00000440118 GTF3C6Q969F1 213 aa22.39■■□□□ 1.17
SHROOM1-204ENST00000440118 NRBP2Q9NSY0 501 aa22.39■■□□□ 1.17
SHROOM1-204ENST00000440118 VCANP13611 3396 aa22.39■■□□□ 1.17
SHROOM1-204ENST00000440118 KDM3AQ9Y4C1 1321 aa22.38■■□□□ 1.17
SHROOM1-204ENST00000440118 M0R2N6 131 aa22.38■■□□□ 1.17
SHROOM1-204ENST00000440118 C22orf31O95567 290 aa22.38■■□□□ 1.17
SHROOM1-204ENST00000440118 TMOD1P28289 359 aa22.38■■□□□ 1.17
SHROOM1-204ENST00000440118 MRPS5P82675 430 aaKnown RBP22.38■■□□□ 1.17
SHROOM1-204ENST00000440118 NPY5RQ15761 445 aa22.38■■□□□ 1.17
SHROOM1-204ENST00000440118 TMEM266Q2M3C6 531 aa22.38■■□□□ 1.17
SHROOM1-204ENST00000440118 ODR4Q5SWX8 454 aa22.38■■□□□ 1.17
SHROOM1-204ENST00000440118 PIK3AP1Q6ZUJ8 805 aa22.38■■□□□ 1.17
SHROOM1-204ENST00000440118 NEK8Q86SG6 692 aa22.38■■□□□ 1.17
SHROOM1-204ENST00000440118 SCLT1Q96NL6 688 aa22.38■■□□□ 1.17
SHROOM1-204ENST00000440118 SEPT9Q9UHD8 586 aaPredicted RBP22.38■■□□□ 1.17
SHROOM1-204ENST00000440118 PADI3Q9ULW8 664 aa22.38■■□□□ 1.17
SHROOM1-204ENST00000440118 AKT3Q9Y243 479 aa22.38■■□□□ 1.17
SHROOM1-204ENST00000440118 ADGRA3Q8IWK6 1321 aa22.37■■□□□ 1.17
SHROOM1-204ENST00000440118 CYP3A7-CYP3A51PA0A087WV96 503 aa22.37■■□□□ 1.17
SHROOM1-204ENST00000440118 ZBTB42B2RXF5 422 aa22.37■■□□□ 1.17
SHROOM1-204ENST00000440118 ENPP3O14638 875 aa22.37■■□□□ 1.17
SHROOM1-204ENST00000440118 MAGEB2O15479 319 aa22.37■■□□□ 1.17
SHROOM1-204ENST00000440118 LPXNO60711 386 aa22.37■■□□□ 1.17
SHROOM1-204ENST00000440118 RPS6KA5O75582 802 aa22.37■■□□□ 1.17
SHROOM1-204ENST00000440118 CYP3A7P24462 503 aa22.37■■□□□ 1.17
SHROOM1-204ENST00000440118 KRT2P35908 639 aa22.37■■□□□ 1.17
SHROOM1-204ENST00000440118 FOSBP53539 338 aa22.37■■□□□ 1.17
SHROOM1-204ENST00000440118 TRIM29Q14134 588 aa22.37■■□□□ 1.17
SHROOM1-204ENST00000440118 ME3Q16798 604 aa22.37■■□□□ 1.17
SHROOM1-204ENST00000440118 KIAA0319LQ8IZA0 1049 aa22.37■■□□□ 1.17
SHROOM1-204ENST00000440118 RDM1Q8NG50 284 aa22.37■■□□□ 1.17
SHROOM1-204ENST00000440118 NAP1L4Q99733 375 aaKnown RBP22.37■■□□□ 1.17
SHROOM1-204ENST00000440118 GJB4Q9NTQ9 266 aa22.37■■□□□ 1.17
SHROOM1-204ENST00000440118 LRFN2Q9ULH4 789 aa22.37■■□□□ 1.17
SHROOM1-204ENST00000440118 TTC28Q96AY4 2481 aa22.36■■□□□ 1.17
SHROOM1-204ENST00000440118 CCNT1O60563 726 aaKnown RBP22.36■■□□□ 1.17
SHROOM1-204ENST00000440118 LARGE1O95461 756 aa22.36■■□□□ 1.17
SHROOM1-204ENST00000440118 CTDNEP1O95476 244 aa22.36■■□□□ 1.17
SHROOM1-204ENST00000440118 VTNP04004 478 aa22.36■■□□□ 1.17
SHROOM1-204ENST00000440118 STAG3L1P0CL83 205 aa22.36■■□□□ 1.17
SHROOM1-204ENST00000440118 GCFC2P16383 781 aaKnown RBP22.36■■□□□ 1.17
SHROOM1-204ENST00000440118 CTNNB1P35222 781 aa22.36■■□□□ 1.17
SHROOM1-204ENST00000440118 CLCN3P51790 818 aa22.36■■□□□ 1.17
SHROOM1-204ENST00000440118 BTG3Q14201 252 aaPredicted RBP22.36■■□□□ 1.17
SHROOM1-204ENST00000440118 UGCGQ16739 394 aa22.36■■□□□ 1.17
SHROOM1-204ENST00000440118 PTPROQ16827 1216 aa22.36■■□□□ 1.17
SHROOM1-204ENST00000440118 AAK1Q2M2I8 961 aa22.36■■□□□ 1.17
SHROOM1-204ENST00000440118 KIZQ2M2Z5 673 aa22.36■■□□□ 1.17
SHROOM1-204ENST00000440118 EPC2Q52LR7 807 aa22.36■■□□□ 1.17
SHROOM1-204ENST00000440118 OSMRQ99650 979 aa22.36■■□□□ 1.17
SHROOM1-204ENST00000440118 LMCD1Q9NZU5 365 aa22.36■■□□□ 1.17
SHROOM1-204ENST00000440118 DENND3A2RUS2 1198 aa22.35■■□□□ 1.17
SHROOM1-204ENST00000440118 SLC37A4O43826 429 aa22.35■■□□□ 1.17
SHROOM1-204ENST00000440118 EDIL3O43854 480 aa22.35■■□□□ 1.17
SHROOM1-204ENST00000440118 PSMD10O75832 226 aa22.35■■□□□ 1.17
SHROOM1-204ENST00000440118 TBC1D8BQ0IIM8 1120 aa22.35■■□□□ 1.17
SHROOM1-204ENST00000440118 EFCAB12Q6NXP0 572 aa22.35■■□□□ 1.17
SHROOM1-204ENST00000440118 TMEM192Q8IY95 271 aa22.35■■□□□ 1.17
SHROOM1-204ENST00000440118 ASB2Q96Q27 587 aa22.35■■□□□ 1.17
SHROOM1-204ENST00000440118 RWDD3Q9Y3V2 267 aa22.35■■□□□ 1.17
SHROOM1-204ENST00000440118 GPR182O15218 404 aa22.34■■□□□ 1.17
SHROOM1-204ENST00000440118 ZNF862O60290 1169 aa22.34■■□□□ 1.17
SHROOM1-204ENST00000440118 SEC24BO95487 1268 aa22.34■■□□□ 1.17
SHROOM1-204ENST00000440118 GPM6BQ13491 265 aa22.34■■□□□ 1.17
SHROOM1-204ENST00000440118 NPAS4Q8IUM7 802 aa22.34■■□□□ 1.17
SHROOM1-204ENST00000440118 LRRC71Q8N4P6 559 aa22.34■■□□□ 1.17
SHROOM1-204ENST00000440118 ETNPPLQ8TBG4 499 aa22.34■■□□□ 1.17
SHROOM1-204ENST00000440118 OXER1Q8TDS5 423 aa22.34■■□□□ 1.17
SHROOM1-204ENST00000440118 LINC01599Q8WXQ3 324 aa22.34■■□□□ 1.17
SHROOM1-204ENST00000440118 MBOAT7Q96N66 472 aa22.34■■□□□ 1.17
SHROOM1-204ENST00000440118 NOC2LQ9Y3T9 749 aaKnown RBP22.34■■□□□ 1.17
SHROOM1-204ENST00000440118 REV3LO60673 3130 aa22.34■■□□□ 1.17
SHROOM1-204ENST00000440118 KIAA1671Q9BY89 1806 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms