RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 ERVK-9P63128 1117 aa16.58■□□□□ 0.24
CPSF7-205ENST00000439958 ERVK-24P63145 666 aa16.58■□□□□ 0.24
CPSF7-205ENST00000439958 PRKCEQ02156 737 aa16.58■□□□□ 0.24
CPSF7-205ENST00000439958 GJC2Q5T442 439 aaPredicted RBP16.58■□□□□ 0.24
CPSF7-205ENST00000439958 TRIM50Q86XT4 487 aa16.58■□□□□ 0.24
CPSF7-205ENST00000439958 BICD1Q96G01 975 aa16.58■□□□□ 0.24
CPSF7-205ENST00000439958 ARMCX3Q9UH62 379 aaPredicted RBP16.58■□□□□ 0.24
CPSF7-205ENST00000439958 PNMA3Q9UL41 463 aa16.58■□□□□ 0.24
CPSF7-205ENST00000439958 USP20Q9Y2K6 914 aa16.58■□□□□ 0.24
CPSF7-205ENST00000439958 PHIPQ8WWQ0 1821 aa16.58■□□□□ 0.24
CPSF7-205ENST00000439958 SOWAHBA6NEL2 793 aa16.58■□□□□ 0.24
CPSF7-205ENST00000439958 BTBD19C9JJ37 291 aa16.58■□□□□ 0.24
CPSF7-205ENST00000439958 NR3C1P04150 777 aa16.58■□□□□ 0.24
CPSF7-205ENST00000439958 MAN2A1Q16706 1144 aa16.58■□□□□ 0.24
CPSF7-205ENST00000439958 STXBP4Q6ZWJ1 553 aa16.58■□□□□ 0.24
CPSF7-205ENST00000439958 NIPA1Q7RTP0 329 aa16.58■□□□□ 0.24
CPSF7-205ENST00000439958 ASTN1O14525 1302 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 MYPNQ86TC9 1320 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 EXOC3O60645 756 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 KCNA2P16389 499 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 GAP43P17677 238 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 SFNP31947 248 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 SYT10Q6XYQ8 523 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 SUGCTQ9HAC7 445 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 ARHGAP6O43182 974 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 ZNF157P51786 506 aaPredicted RBP16.57■□□□□ 0.24
CPSF7-205ENST00000439958 POLGP54098 1239 aaPredicted RBP16.57■□□□□ 0.24
CPSF7-205ENST00000439958 MIS18BP1Q6P0N0 1132 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 LRRC55Q6ZSA7 311 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 OTUD6AQ7L8S5 288 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 DPP9Q86TI2 863 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 NEK9Q8TD19 979 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 TSC1Q92574 1164 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 PPP1R13BQ96KQ4 1090 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 ATP2A1O14983 1001 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 EHHADHQ08426 723 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 COPS5Q92905 334 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 DEF6Q9H4E7 631 aa16.57■□□□□ 0.24
CPSF7-205ENST00000439958 GOLGA8IPA6NC78 632 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 GOLGA8JA6NMD2 632 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 ZNF862O60290 1169 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 EPB41P11171 864 aaKnown RBP16.56■□□□□ 0.24
CPSF7-205ENST00000439958 CETPP11597 493 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 MATR3P43243 847 aaKnown RBP eCLIP16.56■□□□□ 0.24
CPSF7-205ENST00000439958 TDRD12Q587J7 1177 aaKnown RBP16.56■□□□□ 0.24
CPSF7-205ENST00000439958 ANO5Q75V66 913 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 RRAGAQ7L523 313 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 ACRBPQ8NEB7 543 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 ZNF397Q8NF99 534 aaPredicted RBP16.56■□□□□ 0.24
CPSF7-205ENST00000439958 GPRC5AQ8NFJ5 357 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 CHP1Q99653 195 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 DNAI1Q9UI46 699 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 KCNH4Q9UQ05 1017 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 PCDHA2Q9Y5H9 948 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 HARSP12081 509 aaKnown RBP16.56■□□□□ 0.24
CPSF7-205ENST00000439958 UBA1P22314 1058 aaKnown RBP16.56■□□□□ 0.24
CPSF7-205ENST00000439958 RPL13P26373 211 aaKnown RBP16.56■□□□□ 0.24
CPSF7-205ENST00000439958 TMEM143Q96AN5 459 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 MPHOSPH6Q99547 160 aaKnown RBP16.56■□□□□ 0.24
CPSF7-205ENST00000439958 ABHD10Q9NUJ1 306 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 FRMPD4Q14CM0 1322 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 COL11A1P12107 1806 aaPredicted RBP16.56■□□□□ 0.24
CPSF7-205ENST00000439958 XRCC5P13010 732 aaKnown RBP16.56■□□□□ 0.24
CPSF7-205ENST00000439958 TBX2Q13207 712 aaPredicted RBP16.56■□□□□ 0.24
CPSF7-205ENST00000439958 TEX2Q8IWB9 1127 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 NEK11Q8NG66 645 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 BRI3BPQ8WY22 251 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 LSM14BQ9BX40 385 aaKnown RBP16.56■□□□□ 0.24
CPSF7-205ENST00000439958 GBP3Q9H0R5 595 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 ZNF302Q9NR11 478 aa16.56■□□□□ 0.24
CPSF7-205ENST00000439958 LRRC10BA6NIK2 292 aa16.55■□□□□ 0.24
CPSF7-205ENST00000439958 IPO7O95373 1038 aaKnown RBP16.55■□□□□ 0.24
CPSF7-205ENST00000439958 IGBP1P78318 339 aa16.55■□□□□ 0.24
CPSF7-205ENST00000439958 TMEM63BQ5T3F8 832 aa16.55■□□□□ 0.24
CPSF7-205ENST00000439958 ZNF746Q6NUN9 644 aaPredicted RBP16.55■□□□□ 0.24
CPSF7-205ENST00000439958 PPP1R16BQ96T49 567 aa16.55■□□□□ 0.24
CPSF7-205ENST00000439958 KCTD10Q9H3F6 313 aa16.55■□□□□ 0.24
CPSF7-205ENST00000439958 AZI2Q9H6S1 392 aa16.55■□□□□ 0.24
CPSF7-205ENST00000439958 CPA4Q9UI42 421 aa16.55■□□□□ 0.24
CPSF7-205ENST00000439958 PPP2R2CQ9Y2T4 447 aa16.55■□□□□ 0.24
CPSF7-205ENST00000439958 SLC25A27O95847 323 aa16.55■□□□□ 0.24
CPSF7-205ENST00000439958 DMP1Q13316 513 aaPredicted RBP16.55■□□□□ 0.24
CPSF7-205ENST00000439958 MIIPQ5JXC2 388 aa16.55■□□□□ 0.24
CPSF7-205ENST00000439958 LDLRAD1Q5T700 205 aa16.55■□□□□ 0.24
CPSF7-205ENST00000439958 GPAT2Q6NUI2 795 aa16.55■□□□□ 0.24
CPSF7-205ENST00000439958 XRRA1Q6P2D8 792 aa16.55■□□□□ 0.24
CPSF7-205ENST00000439958 PDGFCQ9NRA1 345 aa16.55■□□□□ 0.24
CPSF7-205ENST00000439958 SPTLC3Q9NUV7 552 aa16.55■□□□□ 0.24
CPSF7-205ENST00000439958 UQCRHLA0A096LP55 91 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 AKAP3O75969 853 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 UQCRHP07919 91 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 GTF2A2P52657 109 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 GNG11P61952 73 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 CCNA1P78396 465 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 ARHGAP29Q52LW3 1261 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 DNERQ8NFT8 737 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 OR8K1Q8NGG5 319 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 TYW1Q9NV66 732 aaKnown RBP16.54■□□□□ 0.24
CPSF7-205ENST00000439958 FRMD4BQ9Y2L6 1034 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 LRRIQ4A6NIV6 560 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms