RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 RAB34Q9BZG1 259 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 MMADHCQ9H3L0 296 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-209ENST00000439886 CNOT10Q9H9A5 744 aaKnown RBP12.67□□□□□ -0.38
SMPD4-209ENST00000439886 ATXN2Q99700 1313 aaKnown RBP12.67□□□□□ -0.38
SMPD4-209ENST00000439886 GSTTP1A0A1W2PQM5 241 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 FLOT1O75955 427 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 TNFRSF8P28908 595 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 CCDC152Q4G0S7 254 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 HGSNATQ68CP4 663 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 CENPPQ6IPU0 288 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 ZNF449Q6P9G9 518 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 TRMT1LQ7Z2T5 733 aaKnown RBP12.67□□□□□ -0.38
SMPD4-209ENST00000439886 ADAM33Q9BZ11 813 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 FAM129AQ9BZQ8 928 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.67□□□□□ -0.383e-8■□□□□ 9.5
SMPD4-209ENST00000439886 PNMA3Q9UL41 463 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 NR2E1Q9Y466 385 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 C4AP0C0L4 1744 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 C4BP0C0L5 1744 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 PCDH11XQ9BZA7 1347 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 PCDH11YQ9BZA8 1340 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 CETN3O15182 167 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 TDP2O95551 362 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 NAT1P18440 290 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 PPP1R2P41236 205 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 MAGEA10P43363 369 aaPredicted RBP12.66□□□□□ -0.38
SMPD4-209ENST00000439886 POLE2P56282 527 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 KCNH2Q12809 1159 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 AGBL2Q5U5Z8 902 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 UNC13DQ70J99 1090 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 CCDC105Q8IYK2 499 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 PHC3Q8NDX5 983 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 IFT74Q96LB3 600 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 NUDT12Q9BQG2 462 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 DDX23Q9BUQ8 820 aaKnown RBP12.66□□□□□ -0.38
SMPD4-209ENST00000439886 RAB17Q9H0T7 212 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 FAM114A2Q9NRY5 505 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 RGL1Q9NZL6 768 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 AGAP1Q9UPQ3 857 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 NIP7Q9Y221 180 aaKnown RBP eCLIP12.66□□□□□ -0.38
SMPD4-209ENST00000439886 FRMPD2Q68DX3 1309 aaPredicted RBP12.66□□□□□ -0.38
SMPD4-209ENST00000439886 PNPLA7Q6ZV29 1317 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 CLIC2O15247 247 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 PJA2O43164 708 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 NQO1P15559 274 aaKnown RBP12.66□□□□□ -0.38
SMPD4-209ENST00000439886 NR2F2P24468 414 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 CCDC6Q16204 474 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 LONRF1Q17RB8 773 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 ZSCAN29Q8IWY8 852 aaPredicted RBP12.66□□□□□ -0.38
SMPD4-209ENST00000439886 REXO1Q8N1G1 1221 aaKnown RBP12.66□□□□□ -0.38
SMPD4-209ENST00000439886 IQCDQ96DY2 449 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 EPAS1Q99814 870 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 C7orf25Q9BPX7 421 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 ETNK1Q9HBU6 452 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 MTRF1LQ9UGC7 380 aaKnown RBP12.66□□□□□ -0.38
SMPD4-209ENST00000439886 RASGRF2O14827 1237 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 MGRN1O60291 552 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 ZNF189O75820 626 aaPredicted RBP12.66□□□□□ -0.38
SMPD4-209ENST00000439886 SUN1O94901 812 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 PLCG2P16885 1265 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 CCDC15Q0P6D6 951 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 BYSLQ13895 437 aaKnown RBP12.66□□□□□ -0.38
SMPD4-209ENST00000439886 AADACL2Q6P093 401 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 INTS8Q75QN2 995 aaKnown RBP12.66□□□□□ -0.38
SMPD4-209ENST00000439886 LONP2Q86WA8 852 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 SYCP3Q8IZU3 236 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 FBXO25Q8TCJ0 367 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 FBF1Q8TES7 1133 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 SEMA4AQ9H3S1 761 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 OSGEPQ9NPF4 335 aa12.66□□□□□ -0.38
SMPD4-209ENST00000439886 ARHGAP23Q9P227 1491 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 E9PMD0 336 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 USP11P51784 963 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 RCAN1P53805 252 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 TNIP1Q15025 636 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 TRIP13Q15645 432 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-209ENST00000439886 SUSD4Q5VX71 490 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 GET4Q7L5D6 327 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-209ENST00000439886 ZNF571Q7Z3V5 609 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-209ENST00000439886 FAM81AQ8TBF8 368 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 TOPAZ1Q8N9V7 1692 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 DNAJC8O75937 253 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-209ENST00000439886 GNA11P29992 359 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 PRDX5P30044 214 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 STX2P32856 288 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 GNAQP50148 359 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 RNASELQ05823 741 aaKnown RBP12.65□□□□□ -0.38
SMPD4-209ENST00000439886 EXOC3L4Q17RC7 722 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 ZFYVE27Q5T4F4 411 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 CAPN12Q6ZSI9 719 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 SEPT14Q6ZU15 432 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 KRT25Q7Z3Z0 450 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 ARHGAP22Q7Z5H3 698 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 GUF1Q8N442 669 aaKnown RBP12.65□□□□□ -0.38
SMPD4-209ENST00000439886 RDH13Q8NBN7 331 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 PIGSQ96S52 555 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 CUEDC2Q9H467 287 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 GPCPD1Q9NPB8 672 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 KIAA1024Q9UPX6 916 aa12.65□□□□□ -0.38
SMPD4-209ENST00000439886 PPIP5K2O43314 1243 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms