RNA–Protein interactions for RNA: ENST00000439649.7

GFRA1-204, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GFRA1, Length 9,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-204ENST00000439649 CPA1P15085 419 aa13.11□□□□□ -0.31
GFRA1-204ENST00000439649 CLCN6P51797 869 aa13.11□□□□□ -0.31
GFRA1-204ENST00000439649 E2F5Q15329 346 aa13.11□□□□□ -0.31
GFRA1-204ENST00000439649 DLGAP5Q15398 846 aa13.11□□□□□ -0.31
GFRA1-204ENST00000439649 PKD2L2Q9NZM6 624 aa13.11□□□□□ -0.31
GFRA1-204ENST00000439649 PLEKHG1Q9ULL1 1385 aa13.11□□□□□ -0.31
GFRA1-204ENST00000439649 HLA-DPA1P20036 260 aa13.11□□□□□ -0.31
GFRA1-204ENST00000439649 ITPRIPL1Q6GPH6 555 aa13.11□□□□□ -0.31
GFRA1-204ENST00000439649 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.11□□□□□ -0.31
GFRA1-204ENST00000439649 RNF103-CHMP3A0A140T963 221 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 KRT7P08729 469 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 HOMEZQ8IX15 550 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 KIAA1586Q9HCI6 787 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 PPARGC1AQ9UBK2 798 aaKnown RBP13.1□□□□□ -0.31
GFRA1-204ENST00000439649 CCNL1Q9UK58 526 aaPredicted RBP13.1□□□□□ -0.31
GFRA1-204ENST00000439649 RNF139Q8WU17 664 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 NR1H4Q96RI1 486 aaPredicted RBP13.1□□□□□ -0.31
GFRA1-204ENST00000439649 MRFAP1Q9Y605 127 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 MYBL1P10243 752 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 CTDSPL2Q05D32 466 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 C1orf228Q6PIY5 440 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 USP28Q96RU2 1077 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 LRRC4Q9HBW1 653 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 MTMR6Q9Y217 621 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 FGGP02679 453 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 DYDC2Q96IM9 177 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 NDEL1Q9GZM8 345 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 TBXAS1P24557 533 aaPredicted RBP13.1□□□□□ -0.31
GFRA1-204ENST00000439649 INPP5AQ14642 412 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 ADAT2Q7Z6V5 191 aaKnown RBP13.1□□□□□ -0.31
GFRA1-204ENST00000439649 TBK1Q9UHD2 729 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 ATP7BP35670 1465 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 ABCE1P61221 599 aaKnown RBP13.1□□□□□ -0.31
GFRA1-204ENST00000439649 ZBTB9Q96C00 473 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 FAM129AQ9BZQ8 928 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 A0A0G2JND7 137 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 NEURL1BA8MQ27 555 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 HSPA1AP0DMV8 641 aaKnown RBP13.1□□□□□ -0.31
GFRA1-204ENST00000439649 HSPA1BP0DMV9 641 aaKnown RBP13.1□□□□□ -0.31
GFRA1-204ENST00000439649 DAB2P98082 770 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 TOGARAM2Q6ZUX3 1019 aa13.1□□□□□ -0.31
GFRA1-204ENST00000439649 SLC12A1Q13621 1099 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 CHRNA2Q15822 529 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 CERKLQ49MI3 558 aaPredicted RBP13.09□□□□□ -0.31
GFRA1-204ENST00000439649 KIAA1755Q5JYT7 1200 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 GDAP1Q8TB36 358 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 SPTLC3Q9NUV7 552 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 MYO1CO00159 1063 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 FMNL1O95466 1100 aaPredicted RBP13.09□□□□□ -0.31
GFRA1-204ENST00000439649 HNRNPCP07910 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
GFRA1-204ENST00000439649 NAALADL2Q58DX5 795 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 TRIM72Q6ZMU5 477 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 INTUQ9ULD6 942 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 LRRN2O75325 713 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 TERF2Q15554 542 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 KIAA2013Q8IYS2 634 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 ATP11CQ8NB49 1132 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 SUGCTQ9HAC7 445 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 ABL1P00519 1130 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 TAP1Q03518 808 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 OTUD7BQ6GQQ9 843 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 PLA2G4DQ86XP0 818 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 RDH13Q8NBN7 331 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 ZNF555Q8NEP9 628 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 HPCAL4Q9UM19 191 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 PRUNE1Q86TP1 453 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 SEL1LQ9UBV2 794 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 STXBP3O00186 592 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 ZNF263O14978 683 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 CHRNA3P32297 505 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 KIF23Q02241 960 aaPredicted RBP13.09□□□□□ -0.31
GFRA1-204ENST00000439649 EFTUD2Q15029 972 aaKnown RBP eCLIP13.09□□□□□ -0.31
GFRA1-204ENST00000439649 TJAP1Q5JTD0 557 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 SSH3Q8TE77 659 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 TGS1Q96RS0 853 aaKnown RBP13.09□□□□□ -0.31
GFRA1-204ENST00000439649 HSPA13P48723 471 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 RCAN1P53805 252 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 PBXIP1Q96AQ6 731 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 MYL10Q9BUA6 226 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 SESN1Q9Y6P5 492 aa13.09□□□□□ -0.31
GFRA1-204ENST00000439649 RIMBP2O15034 1052 aa13.08□□□□□ -0.31
GFRA1-204ENST00000439649 APOA4P06727 396 aa13.08□□□□□ -0.31
GFRA1-204ENST00000439649 SEPT9Q9UHD8 586 aaPredicted RBP13.08□□□□□ -0.31
GFRA1-204ENST00000439649 ZNF229Q9UJW7 825 aa13.08□□□□□ -0.31
GFRA1-204ENST00000439649 TMEM259Q4ZIN3 620 aa13.08□□□□□ -0.32
GFRA1-204ENST00000439649 SCFD1Q8WVM8 642 aa13.08□□□□□ -0.32
GFRA1-204ENST00000439649 PCDHA13Q9Y5I0 950 aa13.08□□□□□ -0.32
GFRA1-204ENST00000439649 PSMA2P25787 234 aa13.08□□□□□ -0.32
GFRA1-204ENST00000439649 HOXC9P31274 260 aa13.08□□□□□ -0.32
GFRA1-204ENST00000439649 TIMM10P62072 90 aa13.08□□□□□ -0.32
GFRA1-204ENST00000439649 RUNX1T1Q06455 604 aa13.08□□□□□ -0.32
GFRA1-204ENST00000439649 MAPKAPK5Q8IW41 473 aa13.08□□□□□ -0.32
GFRA1-204ENST00000439649 MRPS26Q9BYN8 205 aaKnown RBP13.08□□□□□ -0.32
GFRA1-204ENST00000439649 TRIM54Q9BYV2 358 aa13.08□□□□□ -0.32
GFRA1-204ENST00000439649 SELENONQ9NZV5 590 aa13.08□□□□□ -0.32
GFRA1-204ENST00000439649 ADAM21Q9UKJ8 722 aa13.08□□□□□ -0.32
GFRA1-204ENST00000439649 MAP4P27816 1152 aaKnown RBP13.08□□□□□ -0.32
GFRA1-204ENST00000439649 CCND2P30279 289 aa13.08□□□□□ -0.32
GFRA1-204ENST00000439649 IFNL3Q8IZI9 196 aa13.08□□□□□ -0.32
GFRA1-204ENST00000439649 GPT2Q8TD30 523 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms