RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 POLR3CQ9BUI4 534 aaPredicted RBP18.93■□□□□ 0.62
TARDBP-203ENST00000439080 NIFKQ9BYG3 293 aaKnown RBP18.93■□□□□ 0.62
TARDBP-203ENST00000439080 LYPLA2O95372 231 aa18.92■□□□□ 0.62
TARDBP-203ENST00000439080 CKBP12277 381 aa18.92■□□□□ 0.62
TARDBP-203ENST00000439080 KLRC1P26715 233 aa18.92■□□□□ 0.62
TARDBP-203ENST00000439080 RPA1P27694 616 aa18.92■□□□□ 0.62
TARDBP-203ENST00000439080 MARCKSP29966 332 aaPredicted RBP18.92■□□□□ 0.62
TARDBP-203ENST00000439080 CCT6AP40227 531 aaKnown RBP18.92■□□□□ 0.62
TARDBP-203ENST00000439080 CCL23P55773 120 aa18.92■□□□□ 0.62
TARDBP-203ENST00000439080 GRIN1Q05586 938 aa18.92■□□□□ 0.62
TARDBP-203ENST00000439080 STK38Q15208 465 aa18.92■□□□□ 0.62
TARDBP-203ENST00000439080 TARBP2Q15633 366 aaKnown RBP18.92■□□□□ 0.62
TARDBP-203ENST00000439080 MFSD5Q6N075 450 aa18.92■□□□□ 0.62
TARDBP-203ENST00000439080 FAM49AQ9H0Q0 323 aaPredicted RBP18.92■□□□□ 0.62
TARDBP-203ENST00000439080 TSHZ2Q9NRE2 1034 aa18.92■□□□□ 0.62
TARDBP-203ENST00000439080 PCDHA2Q9Y5H9 948 aa18.92■□□□□ 0.62
TARDBP-203ENST00000439080 STK24Q9Y6E0 443 aa18.92■□□□□ 0.62
TARDBP-203ENST00000439080 CAND2O75155 1236 aa18.91■□□□□ 0.62
TARDBP-203ENST00000439080 CTSHP09668 335 aa18.91■□□□□ 0.62
TARDBP-203ENST00000439080 CDC25AP30304 524 aa18.91■□□□□ 0.62
TARDBP-203ENST00000439080 DNM1Q05193 864 aaKnown RBP18.91■□□□□ 0.62
TARDBP-203ENST00000439080 TBC1D8BQ0IIM8 1120 aa18.91■□□□□ 0.62
TARDBP-203ENST00000439080 SLC39A14Q15043 492 aa18.91■□□□□ 0.62
TARDBP-203ENST00000439080 PRPF38BQ5VTL8 546 aaKnown RBP18.91■□□□□ 0.62
TARDBP-203ENST00000439080 KRT79Q5XKE5 535 aa18.91■□□□□ 0.62
TARDBP-203ENST00000439080 LRRC8DQ7L1W4 858 aa18.91■□□□□ 0.62
TARDBP-203ENST00000439080 RETREG2Q8NC44 543 aa18.91■□□□□ 0.62
TARDBP-203ENST00000439080 DNAJB3Q8WWF6 145 aa18.91■□□□□ 0.62
TARDBP-203ENST00000439080 SCLYQ96I15 445 aa18.91■□□□□ 0.62
TARDBP-203ENST00000439080 CYP26B1Q9NR63 512 aa18.91■□□□□ 0.62
TARDBP-203ENST00000439080 TFIP11Q9UBB9 837 aaKnown RBP18.91■□□□□ 0.62
TARDBP-203ENST00000439080 FBXO2Q9UK22 296 aaPredicted RBP18.91■□□□□ 0.62
TARDBP-203ENST00000439080 MORC2Q9Y6X9 1032 aaPredicted RBP18.91■□□□□ 0.62
TARDBP-203ENST00000439080 ZBTB39O15060 712 aa18.9■□□□□ 0.62
TARDBP-203ENST00000439080 YEATS4O95619 227 aa18.9■□□□□ 0.62
TARDBP-203ENST00000439080 SELPP16109 830 aa18.9■□□□□ 0.62
TARDBP-203ENST00000439080 NPEPPSP55786 919 aa18.9■□□□□ 0.62
TARDBP-203ENST00000439080 NUCB2P80303 420 aa18.9■□□□□ 0.62
TARDBP-203ENST00000439080 FPGSQ05932 587 aa18.9■□□□□ 0.62
TARDBP-203ENST00000439080 ZNF618Q5T7W0 954 aa18.9■□□□□ 0.62
TARDBP-203ENST00000439080 OTUD6AQ7L8S5 288 aa18.9■□□□□ 0.62
TARDBP-203ENST00000439080 TMEM199Q8N511 208 aa18.9■□□□□ 0.62
TARDBP-203ENST00000439080 LINC00301Q8NCQ3 95 aa18.9■□□□□ 0.62
TARDBP-203ENST00000439080 CEP170P1Q96L14 293 aa18.9■□□□□ 0.62
TARDBP-203ENST00000439080 AK8Q96MA6 479 aa18.9■□□□□ 0.62
TARDBP-203ENST00000439080 CCDC43Q96MW1 224 aaKnown RBP18.9■□□□□ 0.62
TARDBP-203ENST00000439080 CEP89Q96ST8 783 aa18.9■□□□□ 0.62
TARDBP-203ENST00000439080 MMTAG2Q9BU76 263 aaKnown RBP18.9■□□□□ 0.62
TARDBP-203ENST00000439080 TET1Q8NFU7 2136 aa18.89■□□□□ 0.62
TARDBP-203ENST00000439080 LAMA2P24043 3122 aaKnown RBP18.89■□□□□ 0.61
TARDBP-203ENST00000439080 KDM3AQ9Y4C1 1321 aa18.89■□□□□ 0.61
TARDBP-203ENST00000439080 SMIM35A0A1B0GVV1 85 aa18.89■□□□□ 0.61
TARDBP-203ENST00000439080 MAGEB2O15479 319 aa18.89■□□□□ 0.61
TARDBP-203ENST00000439080 IQCF3P0C7M6 154 aa18.89■□□□□ 0.61
TARDBP-203ENST00000439080 CSF2RAP15509 400 aa18.89■□□□□ 0.61
TARDBP-203ENST00000439080 MUTP22033 750 aa18.89■□□□□ 0.61
TARDBP-203ENST00000439080 LONP1P36776 959 aaKnown RBP18.89■□□□□ 0.61
TARDBP-203ENST00000439080 CLCN3P51790 818 aa18.89■□□□□ 0.61
TARDBP-203ENST00000439080 ECM1Q16610 540 aa18.89■□□□□ 0.61
TARDBP-203ENST00000439080 XKR9Q5GH70 373 aa18.89■□□□□ 0.61
TARDBP-203ENST00000439080 ATL3Q6DD88 541 aa18.89■□□□□ 0.61
TARDBP-203ENST00000439080 TRAF7Q6Q0C0 670 aa18.89■□□□□ 0.61
TARDBP-203ENST00000439080 RPAINQ86UA6 219 aa18.89■□□□□ 0.61
TARDBP-203ENST00000439080 RSPH3Q86UC2 560 aa18.89■□□□□ 0.61
TARDBP-203ENST00000439080 LRRC71Q8N4P6 559 aa18.89■□□□□ 0.61
TARDBP-203ENST00000439080 METTL13Q8N6R0 699 aa18.89■□□□□ 0.61
TARDBP-203ENST00000439080 ZNF579Q8NAF0 562 aaKnown RBP18.89■□□□□ 0.61
TARDBP-203ENST00000439080 PIGOQ8TEQ8 1089 aa18.89■□□□□ 0.61
TARDBP-203ENST00000439080 RBM19Q9Y4C8 960 aaKnown RBP18.89■□□□□ 0.61
TARDBP-203ENST00000439080 SRPRBQ9Y5M8 271 aaKnown RBP18.89■□□□□ 0.61
TARDBP-203ENST00000439080 SPTLC2O15270 562 aa18.88■□□□□ 0.61
TARDBP-203ENST00000439080 RPLP2P05387 115 aaKnown RBP18.88■□□□□ 0.61
TARDBP-203ENST00000439080 RARRES1P49788 294 aa18.88■□□□□ 0.61
TARDBP-203ENST00000439080 ZRSR1Q15695 479 aaKnown RBP18.88■□□□□ 0.61
TARDBP-203ENST00000439080 LINC01465Q8N7H1 131 aa18.88■□□□□ 0.61
TARDBP-203ENST00000439080 KRI1Q8N9T8 703 aaKnown RBP18.88■□□□□ 0.61
TARDBP-203ENST00000439080 GDF15Q99988 308 aa18.88■□□□□ 0.61
TARDBP-203ENST00000439080 CSRNP2Q9H175 543 aa18.88■□□□□ 0.61
TARDBP-203ENST00000439080 BMP2KQ9NSY1 1161 aaPredicted RBP18.88■□□□□ 0.61
TARDBP-203ENST00000439080 ANKEF1Q9NU02 776 aa18.88■□□□□ 0.61
TARDBP-203ENST00000439080 DDX19AQ9NUU7 478 aaKnown RBP18.88■□□□□ 0.61
TARDBP-203ENST00000439080 CFAP45Q9UL16 551 aa18.88■□□□□ 0.61
TARDBP-203ENST00000439080 KIAA1024Q9UPX6 916 aa18.88■□□□□ 0.61
TARDBP-203ENST00000439080 PPME1Q9Y570 386 aa18.88■□□□□ 0.61
TARDBP-203ENST00000439080 ATP6V1DQ9Y5K8 247 aa18.88■□□□□ 0.61
TARDBP-203ENST00000439080 MICAL3Q7RTP6 2002 aa18.88■□□□□ 0.61
TARDBP-203ENST00000439080 A0A087WWV3 80 aa18.87■□□□□ 0.61
TARDBP-203ENST00000439080 MAFO75444 373 aaPredicted RBP18.87■□□□□ 0.61
TARDBP-203ENST00000439080 POLGP54098 1239 aaPredicted RBP18.87■□□□□ 0.61
TARDBP-203ENST00000439080 MRPS6P82932 125 aaKnown RBP18.87■□□□□ 0.61
TARDBP-203ENST00000439080 TMEM62Q0P6H9 643 aa18.87■□□□□ 0.61
TARDBP-203ENST00000439080 PPIGQ13427 754 aaKnown RBP eCLIP18.87■□□□□ 0.616e-7■□□□□ 8.8
TARDBP-203ENST00000439080 EFCAB12Q6NXP0 572 aa18.87■□□□□ 0.61
TARDBP-203ENST00000439080 CHRDL2Q6WN34 429 aa18.87■□□□□ 0.61
TARDBP-203ENST00000439080 CABP7Q86V35 215 aa18.87■□□□□ 0.61
TARDBP-203ENST00000439080 SLC7A3Q8WY07 619 aa18.87■□□□□ 0.61
TARDBP-203ENST00000439080 CHAMP1Q96JM3 812 aa18.87■□□□□ 0.61
TARDBP-203ENST00000439080 CLIC6Q96NY7 704 aa18.87■□□□□ 0.61
TARDBP-203ENST00000439080 NACC1Q96RE7 527 aa18.87■□□□□ 0.61
TARDBP-203ENST00000439080 IGKV6-21A0A0C4DH24 114 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms