RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 MTMR9Q96QG7 549 aa20.03■□□□□ 0.8
NCSTN-208ENST00000438008 NIFKQ9BYG3 293 aaKnown RBP20.03■□□□□ 0.8
NCSTN-208ENST00000438008 IFIH1Q9BYX4 1025 aaKnown RBP20.03■□□□□ 0.8
NCSTN-208ENST00000438008 YBX2Q9Y2T7 364 aaKnown RBP20.03■□□□□ 0.8
NCSTN-208ENST00000438008 TRPV2Q9Y5S1 764 aa20.03■□□□□ 0.8
NCSTN-208ENST00000438008 M0QZ92 97 aa20.02■□□□□ 0.8
NCSTN-208ENST00000438008 P4HBP07237 508 aaKnown RBP20.02■□□□□ 0.8
NCSTN-208ENST00000438008 GHRP10912 638 aa20.02■□□□□ 0.8
NCSTN-208ENST00000438008 TRAPPC10P48553 1259 aa20.02■□□□□ 0.8
NCSTN-208ENST00000438008 LPIN1Q14693 890 aa20.02■□□□□ 0.8
NCSTN-208ENST00000438008 TARBP2Q15633 366 aaKnown RBP20.02■□□□□ 0.8
NCSTN-208ENST00000438008 TRMT1LQ7Z2T5 733 aaKnown RBP20.02■□□□□ 0.8
NCSTN-208ENST00000438008 USP38Q8NB14 1042 aa20.02■□□□□ 0.8
NCSTN-208ENST00000438008 GUCD1Q96NT3 240 aa20.02■□□□□ 0.8
NCSTN-208ENST00000438008 CELF4Q9BZC1 486 aaKnown RBP20.02■□□□□ 0.8
NCSTN-208ENST00000438008 ZNF576Q9H609 170 aa20.02■□□□□ 0.8
NCSTN-208ENST00000438008 PCDHA12Q9UN75 941 aa20.02■□□□□ 0.8
NCSTN-208ENST00000438008 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.02■□□□□ 0.8
NCSTN-208ENST00000438008 KIF28PB7ZC32 967 aa20.01■□□□□ 0.79
NCSTN-208ENST00000438008 DKC1O60832 514 aaKnown RBP eCLIP20.01■□□□□ 0.79
NCSTN-208ENST00000438008 GJB2P29033 226 aa20.01■□□□□ 0.79
NCSTN-208ENST00000438008 QARSP47897 775 aaKnown RBP20.01■□□□□ 0.79
NCSTN-208ENST00000438008 DEFB103AP81534 67 aa20.01■□□□□ 0.79
NCSTN-208ENST00000438008 GNL2Q13823 731 aaKnown RBP20.01■□□□□ 0.79
NCSTN-208ENST00000438008 TSHZ1Q6ZSZ6 1077 aa20.01■□□□□ 0.79
NCSTN-208ENST00000438008 LINC01465Q8N7H1 131 aa20.01■□□□□ 0.79
NCSTN-208ENST00000438008 BANK1Q8NDB2 785 aa20.01■□□□□ 0.79
NCSTN-208ENST00000438008 FAM161BQ96MY7 647 aa20.01■□□□□ 0.79
NCSTN-208ENST00000438008 RBAK-RBAKDNI3L0D1 243 aa20■□□□□ 0.79
NCSTN-208ENST00000438008 TMEM62Q0P6H9 643 aa20■□□□□ 0.79
NCSTN-208ENST00000438008 CUL4AQ13619 759 aa20■□□□□ 0.79
NCSTN-208ENST00000438008 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20■□□□□ 0.79
NCSTN-208ENST00000438008 FAM43BQ6ZT52 329 aaPredicted RBP20■□□□□ 0.79
NCSTN-208ENST00000438008 ZNF710Q8N1W2 664 aa20■□□□□ 0.79
NCSTN-208ENST00000438008 CEP89Q96ST8 783 aa20■□□□□ 0.79
NCSTN-208ENST00000438008 TMEM60Q9H2L4 133 aa20■□□□□ 0.79
NCSTN-208ENST00000438008 NKX2-4Q9H2Z4 354 aa20■□□□□ 0.79
NCSTN-208ENST00000438008 TTC12Q9H892 705 aaPredicted RBP20■□□□□ 0.79
NCSTN-208ENST00000438008 MYH9P35579 1960 aaKnown RBP20■□□□□ 0.79
NCSTN-208ENST00000438008 GJB5O95377 273 aa19.99■□□□□ 0.79
NCSTN-208ENST00000438008 AMHP03971 560 aa19.99■□□□□ 0.79
NCSTN-208ENST00000438008 MYOGP15173 224 aa19.99■□□□□ 0.79
NCSTN-208ENST00000438008 ATP2B1P20020 1258 aa19.99■□□□□ 0.79
NCSTN-208ENST00000438008 TMOD1P28289 359 aa19.99■□□□□ 0.79
NCSTN-208ENST00000438008 MCM7P33993 719 aa19.99■□□□□ 0.79
NCSTN-208ENST00000438008 NCAPH2Q6IBW4 605 aa19.99■□□□□ 0.79
NCSTN-208ENST00000438008 EFCAB12Q6NXP0 572 aa19.99■□□□□ 0.79
NCSTN-208ENST00000438008 ANO5Q75V66 913 aa19.99■□□□□ 0.79
NCSTN-208ENST00000438008 C4orf19Q8IY42 314 aa19.99■□□□□ 0.79
NCSTN-208ENST00000438008 METTL13Q8N6R0 699 aa19.99■□□□□ 0.79
NCSTN-208ENST00000438008 CDX2Q99626 313 aaPredicted RBP19.99■□□□□ 0.79
NCSTN-208ENST00000438008 AGO3Q9H9G7 860 aaKnown RBP19.99■□□□□ 0.79
NCSTN-208ENST00000438008 SLC28A3Q9HAS3 691 aa19.99■□□□□ 0.79
NCSTN-208ENST00000438008 SEPT9Q9UHD8 586 aaPredicted RBP19.99■□□□□ 0.79
NCSTN-208ENST00000438008 NOL7Q9UMY1 257 aaKnown RBP19.99■□□□□ 0.79
NCSTN-208ENST00000438008 SMC3Q9UQE7 1217 aa19.99■□□□□ 0.79
NCSTN-208ENST00000438008 STXBP5LQ9Y2K9 1186 aa19.99■□□□□ 0.79
NCSTN-208ENST00000438008 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.98■□□□□ 0.79
NCSTN-208ENST00000438008 DDX11L8A8MPP1 907 aa19.98■□□□□ 0.79
NCSTN-208ENST00000438008 TXKP42681 527 aa19.98■□□□□ 0.79
NCSTN-208ENST00000438008 TBC1D8BQ0IIM8 1120 aa19.98■□□□□ 0.79
NCSTN-208ENST00000438008 TTC38Q5R3I4 469 aa19.98■□□□□ 0.79
NCSTN-208ENST00000438008 ZSWIM4Q9H7M6 989 aa19.98■□□□□ 0.79
NCSTN-208ENST00000438008 WRAP73Q9P2S5 460 aaPredicted RBP19.98■□□□□ 0.79
NCSTN-208ENST00000438008 PPME1Q9Y570 386 aa19.98■□□□□ 0.79
NCSTN-208ENST00000438008 IGKV6-21A0A0C4DH24 114 aa19.97■□□□□ 0.79
NCSTN-208ENST00000438008 TLL1O43897 1013 aa19.97■□□□□ 0.79
NCSTN-208ENST00000438008 GPR32O75388 356 aa19.97■□□□□ 0.79
NCSTN-208ENST00000438008 CD52P31358 61 aa19.97■□□□□ 0.79
NCSTN-208ENST00000438008 CLCN3P51790 818 aa19.97■□□□□ 0.79
NCSTN-208ENST00000438008 CRYBB1P53674 252 aaPredicted RBP19.97■□□□□ 0.79
NCSTN-208ENST00000438008 GRIN2CQ14957 1233 aa19.97■□□□□ 0.79
NCSTN-208ENST00000438008 ZNF174Q15697 407 aa19.97■□□□□ 0.79
NCSTN-208ENST00000438008 MTERF2Q49AM1 385 aa19.97■□□□□ 0.79
NCSTN-208ENST00000438008 TMCO2Q7Z6W1 182 aaPredicted RBP19.97■□□□□ 0.79
NCSTN-208ENST00000438008 NEK9Q8TD19 979 aa19.97■□□□□ 0.79
NCSTN-208ENST00000438008 TOP1MTQ969P6 601 aa19.97■□□□□ 0.79
NCSTN-208ENST00000438008 DYDC2Q96IM9 177 aa19.97■□□□□ 0.79
NCSTN-208ENST00000438008 MAP7D2Q96T17 732 aa19.97■□□□□ 0.79
NCSTN-208ENST00000438008 RAD9AQ99638 391 aa19.97■□□□□ 0.79
NCSTN-208ENST00000438008 HSD17B14Q9BPX1 270 aa19.97■□□□□ 0.79
NCSTN-208ENST00000438008 LXNQ9BS40 222 aa19.97■□□□□ 0.79
NCSTN-208ENST00000438008 RGL1Q9NZL6 768 aa19.97■□□□□ 0.79
NCSTN-208ENST00000438008 WDR81Q562E7 1941 aa19.96■□□□□ 0.79
NCSTN-208ENST00000438008 TMEM150BA6NC51 233 aa19.96■□□□□ 0.79
NCSTN-208ENST00000438008 MAFO75444 373 aaPredicted RBP19.96■□□□□ 0.79
NCSTN-208ENST00000438008 SLITRK3O94933 977 aa19.96■□□□□ 0.79
NCSTN-208ENST00000438008 LYPLA2O95372 231 aa19.96■□□□□ 0.79
NCSTN-208ENST00000438008 VTNP04004 478 aa19.96■□□□□ 0.79
NCSTN-208ENST00000438008 CA3P07451 260 aa19.96■□□□□ 0.79
NCSTN-208ENST00000438008 TOB1P50616 345 aaPredicted RBP19.96■□□□□ 0.79
NCSTN-208ENST00000438008 PPP2R2DQ66LE6 453 aa19.96■□□□□ 0.79
NCSTN-208ENST00000438008 MYOCDQ8IZQ8 938 aa19.96■□□□□ 0.79
NCSTN-208ENST00000438008 LRRC71Q8N4P6 559 aa19.96■□□□□ 0.79
NCSTN-208ENST00000438008 EIF2AK1Q9BQI3 630 aaKnown RBP19.96■□□□□ 0.79
NCSTN-208ENST00000438008 ZBED2Q9BTP6 218 aa19.96■□□□□ 0.79
NCSTN-208ENST00000438008 FTHL17Q9BXU8 183 aa19.96■□□□□ 0.79
NCSTN-208ENST00000438008 SUGCTQ9HAC7 445 aa19.96■□□□□ 0.79
NCSTN-208ENST00000438008 CDHR5Q9HBB8 845 aa19.96■□□□□ 0.79
NCSTN-208ENST00000438008 CYP26B1Q9NR63 512 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms