RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 KDM5DQ9BY66 1539 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 EDEM3Q9BZQ6 932 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 SLITRK6Q9H5Y7 841 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 NDUFAF2Q8N183 169 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 TTC17Q96AE7 1141 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 USP28Q96RU2 1077 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 OLFML3Q9NRN5 406 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.31□□□□□ -0.44
PTCH1-209ENST00000437951 WDR91A4D1P6 747 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 NUP62P37198 522 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-209ENST00000437951 KRT72Q14CN4 511 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 LRRC8EQ6NSJ5 796 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 KRT28Q7Z3Y7 464 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 SIKE1Q9BRV8 207 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 IRS4O14654 1257 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-209ENST00000437951 SNX2O60749 519 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 KRT6AP02538 564 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 KRT6BP04259 564 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 KRT6CP48668 564 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 HIPK4Q8NE63 616 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 TADA1Q96BN2 335 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 SCN3BQ9NY72 215 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 GOLGA4Q13439 2230 aaKnown RBP12.31□□□□□ -0.44
PTCH1-209ENST00000437951 SUPT3HO75486 399 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 ARL13BQ3SXY8 428 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 PRUNE1Q86TP1 453 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 LARP4BQ92615 738 aaKnown RBP12.31□□□□□ -0.44
PTCH1-209ENST00000437951 AATFQ9NY61 560 aaKnown RBP eCLIP12.31□□□□□ -0.44
PTCH1-209ENST00000437951 PLXNC1O60486 1568 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 NBPF26B4DH59 902 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 CYP2C19P33261 490 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 DHX34Q14147 1143 aaKnown RBP12.31□□□□□ -0.44
PTCH1-209ENST00000437951 MYLK4Q86YV6 388 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-209ENST00000437951 NBPF15Q8N660 670 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 GCNT4Q9P109 453 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 VPS54Q9P1Q0 977 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 FLT4P35916 1363 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 SOWAHDA6NJG2 315 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 TLR3O15455 904 aaKnown RBP12.31□□□□□ -0.44
PTCH1-209ENST00000437951 MAFGO15525 162 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 PRPSAP2O60256 369 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 JAK2O60674 1132 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 CPA1P15085 419 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 CHRNA3P32297 505 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 TBC1D9BQ66K14 1250 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 TTC8Q8TAM2 541 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 ALKBH8Q96BT7 664 aaKnown RBP12.31□□□□□ -0.44
PTCH1-209ENST00000437951 TEKT3Q9BXF9 490 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 ADNPQ9H2P0 1102 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 PKD2L1Q9P0L9 805 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 WDR7Q9Y4E6 1490 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 ENO4A6NNW6 628 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 H7C0S8 307 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 APOA5Q6Q788 366 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 SETD3Q86TU7 594 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-209ENST00000437951 MMS19Q96T76 1030 aa12.31□□□□□ -0.44
PTCH1-209ENST00000437951 ZBED1O96006 694 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 NT5C2P49902 561 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 SYCP2LQ5T4T6 812 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 ZSCAN10Q96SZ4 725 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-209ENST00000437951 MICAL3Q7RTP6 2002 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 VHLP40337 213 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 TFDP1Q14186 410 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 DMC1Q14565 340 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 WLSQ5T9L3 541 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 ZNF654Q8IZM8 581 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 RBM17Q96I25 401 aaKnown RBP12.3□□□□□ -0.44
PTCH1-209ENST00000437951 KCNJ14Q9UNX9 436 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 AP3B1O00203 1094 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 NR2F2P24468 414 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 SPATA21Q7Z572 469 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 UBN1Q9NPG3 1134 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 CPSF3Q9UKF6 684 aaKnown RBP12.3□□□□□ -0.44
PTCH1-209ENST00000437951 PLCH2O75038 1416 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 EIF3HO15372 352 aaKnown RBP eCLIP12.3□□□□□ -0.44
PTCH1-209ENST00000437951 PRDM1O75626 825 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 TECP42680 631 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 MECOMQ03112 1051 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 CNPY3Q9BT09 278 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 SEL1LQ9UBV2 794 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-209ENST00000437951 DSG1Q02413 1049 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 PARP10Q53GL7 1025 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 ZSCAN32Q9NX65 697 aa12.3□□□□□ -0.44
PTCH1-209ENST00000437951 ADGRA3Q8IWK6 1321 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 AGTP01019 485 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 S100A9P06702 114 aaKnown RBP12.29□□□□□ -0.44
PTCH1-209ENST00000437951 ATP5JP18859 108 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 ANGPTL8Q6UXH0 198 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 DISC1Q9NRI5 854 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 NIP7Q9Y221 180 aaKnown RBP eCLIP12.29□□□□□ -0.44
PTCH1-209ENST00000437951 FIS1Q9Y3D6 152 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 MYO1DO94832 1006 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 KLHL2O95198 593 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 MYCLP12524 364 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-209ENST00000437951 TAGAPQ8N103 731 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 ACCSQ96QU6 501 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 ZNF556Q9HAH1 456 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 SAYSD1Q9NPB0 183 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 PRKAG2Q9UGJ0 569 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms