RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 PCDHB6Q9Y5E3 794 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 SNTNA6NMZ2 147 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 BHMG1C9JSJ3 638 aaPredicted RBP7.02□□□□□ -1.29
MCF2-205ENST00000437564 ENPP3O14638 875 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 ZW10O43264 779 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 CUTAO60888 179 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 RNGTTO60942 597 aaKnown RBP7.02□□□□□ -1.29
MCF2-205ENST00000437564 ADAMTS4O75173 837 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 OR5F1O95221 314 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 GNAI3P08754 354 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 TBXAS1P24557 533 aaPredicted RBP7.02□□□□□ -1.29
MCF2-205ENST00000437564 ADCY8P40145 1251 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 ALDH18A1P54886 795 aaKnown RBP7.02□□□□□ -1.29
MCF2-205ENST00000437564 CD83Q01151 205 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 RELAQ04206 551 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 NFIAQ12857 509 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 SQLEQ14534 574 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 CNPY1Q3B7I2 92 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 ZCWPW2Q504Y3 356 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 ZBTB41Q5SVQ8 909 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 CYP4A22Q5TCH4 519 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 METTL21CQ5VZV1 264 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 TRIM68Q6AZZ1 485 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 PADI6Q6TGC4 694 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 GALNT7Q86SF2 657 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 TXNDC2Q86VQ3 553 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 NLRP14Q86W24 1093 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 TEX19Q8NA77 164 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 NOA1Q8NC60 698 aaKnown RBP7.02□□□□□ -1.29
MCF2-205ENST00000437564 ANGPTL6Q8NI99 470 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 CAGE1Q8TC20 777 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 FBXO41Q8TF61 875 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 RUBCNQ92622 972 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 CCT8L2Q96SF2 557 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 TUBA1CQ9BQE3 449 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 MRPL9Q9BYD2 267 aaKnown RBP7.02□□□□□ -1.29
MCF2-205ENST00000437564 SRCIN1Q9C0H9 1055 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 EPC1Q9H2F5 836 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 ZNF277Q9NRM2 450 aaPredicted RBP7.02□□□□□ -1.29
MCF2-205ENST00000437564 ARMC1Q9NVT9 282 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 SIRT5Q9NXA8 310 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 DLGAP2Q9P1A6 1054 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 USTQ9Y2C2 406 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 HBS1LQ9Y450 684 aaKnown RBP7.02□□□□□ -1.29
MCF2-205ENST00000437564 PCDHB15Q9Y5E8 787 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 FAM135AQ9P2D6 1515 aa7.02□□□□□ -1.29
MCF2-205ENST00000437564 NPHP3Q7Z494 1330 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 MAGEA13PA6NCF6 341 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 PRSS47A8MTI9 375 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 FADS2P1A8MWK0 482 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 CENPBD1B2RD01 187 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 PIK3CDO00329 1044 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 SOCS7O14512 581 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 ARHGAP33O14559 1287 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 FIBPO43427 364 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 PDE5AO76074 875 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 SLC34A2O95436 690 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 GNA14O95837 355 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 ZBED1O96006 694 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 CALM1P0DP23 149 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 CALM2P0DP24 149 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 CALM3P0DP25 149 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 ZNF3P17036 446 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 PRKACAP17612 351 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 CDC25CP30307 473 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 TRIM23P36406 574 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 HSPA9P38646 679 aaKnown RBP7.01□□□□□ -1.29
MCF2-205ENST00000437564 MTHFRP42898 656 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 ZNF165P49910 485 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 PLTPP55058 493 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 MARSP56192 900 aaKnown RBP7.01□□□□□ -1.29
MCF2-205ENST00000437564 APBA1Q02410 837 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 LRRC74AQ0VAA2 488 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 DCTN2Q13561 401 aaKnown RBP7.01□□□□□ -1.29
MCF2-205ENST00000437564 MOGSQ13724 837 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 ITGA9Q13797 1035 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 STK11Q15831 433 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 CTC1Q2NKJ3 1217 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 MYLK3Q32MK0 819 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 FBXO43Q4G163 708 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 C6orf183Q5T699 404 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 RNASEH2BQ5TBB1 312 aaKnown RBP7.01□□□□□ -1.29
MCF2-205ENST00000437564 PHLDB3Q6NSJ2 640 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 KDM7AQ6ZMT4 941 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 DHX32Q7L7V1 743 aaKnown RBP7.01□□□□□ -1.29
MCF2-205ENST00000437564 ZGPATQ8N5A5 531 aaKnown RBP7.01□□□□□ -1.29
MCF2-205ENST00000437564 MYCBPAPQ8TBZ2 947 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 FNDC8Q8TC99 324 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 FBF1Q8TES7 1133 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 KIFC2Q96AC6 838 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 CCDC127Q96BQ5 260 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 GPATCH1Q9BRR8 931 aaKnown RBP7.01□□□□□ -1.29
MCF2-205ENST00000437564 TSEN34Q9BSV6 310 aaKnown RBP7.01□□□□□ -1.29
MCF2-205ENST00000437564 CCSER1Q9C0I3 900 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 CYP4F11Q9HBI6 524 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 SLC38A10Q9HBR0 1119 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 PAG1Q9NWQ8 432 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 GID8Q9NWU2 228 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 PRKAB1Q9Y478 270 aa7.01□□□□□ -1.29
MCF2-205ENST00000437564 ANKRD34BA5PLL1 514 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms