RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 EIF3BP55884 814 aaKnown RBP17.05■□□□□ 0.32
PTPN13-204ENST00000436978 KCNQ4P56696 695 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 ZNF699Q32M78 642 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 PRPF38AQ8NAV1 312 aaKnown RBP17.05■□□□□ 0.32
PTPN13-204ENST00000436978 KDM6AO15550 1401 aaPredicted RBP17.05■□□□□ 0.32
PTPN13-204ENST00000436978 SERPINB6P35237 376 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 MFSD14CQ5VZR4 134 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 HPCAL4Q9UM19 191 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 SASH1O94885 1247 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 CYP2E1P05181 493 aaPredicted RBP17.05■□□□□ 0.32
PTPN13-204ENST00000436978 DYNLT1P63172 113 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 NEDD4P46934 1319 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 SNX1Q13596 522 aa17.05■□□□□ 0.32
PTPN13-204ENST00000436978 RNF219Q5W0B1 726 aaPredicted RBP17.05■□□□□ 0.32
PTPN13-204ENST00000436978 LUC7L3O95232 432 aaKnown RBP17.04■□□□□ 0.32
PTPN13-204ENST00000436978 PLEKHA8P1O95397 391 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 ZBED1O96006 694 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 SCARA5Q6ZMJ2 495 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 IQANK1A0A1B0GTG1 560 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 EPHB1P54762 984 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 DR1Q01658 176 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 FAM182BQ5T319 152 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 CENPUQ71F23 418 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 COBLO75128 1261 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 GPC3P51654 580 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 ANKRD20A4Q4UJ75 823 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 ANKRD20A8PQ5CZ79 823 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 ANKRD20A2Q5SQ80 823 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 ANKRD20A1Q5TYW2 823 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 C11orf57Q6ZUT1 292 aaPredicted RBP17.04■□□□□ 0.32
PTPN13-204ENST00000436978 CD209Q9NNX6 404 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 EIF4A3P38919 411 aaKnown RBP17.04■□□□□ 0.32
PTPN13-204ENST00000436978 SP8Q8IXZ3 490 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 GRAMD1CQ8IYS0 662 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 GBP5Q96PP8 586 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 KLC2Q9H0B6 622 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 FCER1AP12319 257 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 EPB41L5Q9HCM4 733 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 CEP72Q9P209 647 aa17.04■□□□□ 0.32
PTPN13-204ENST00000436978 MKRN3Q13064 507 aaKnown RBP17.04■□□□□ 0.32
PTPN13-204ENST00000436978 RBM41Q96IZ5 413 aaKnown RBP17.04■□□□□ 0.32
PTPN13-204ENST00000436978 CCDC197Q8NCU1 140 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 RAD54LQ92698 747 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 FMO2Q99518 471 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 TRPV6Q9H1D0 765 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 NDUFA10O95299 355 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 STMN1P16949 149 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 TOGARAM2Q6ZUX3 1019 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 EEF2KMTQ96G04 330 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 BHMT2Q9H2M3 363 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 TMED2Q15363 201 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 CFAP36Q96G28 342 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 BPIFA3Q9BQP9 254 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 ZBED2Q9BTP6 218 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 CHEK2O96017 543 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 CA4P22748 312 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 ZNF526Q8TF50 670 aaPredicted RBP17.03■□□□□ 0.32
PTPN13-204ENST00000436978 IQGAP1P46940 1657 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 PODXLO00592 558 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 MOCS3O95396 460 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 ALS2CLQ60I27 953 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 OR6B3Q8NGW1 331 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 IQCA1LA6NCM1 817 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 HUS1O60921 280 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 ZNF18P17022 549 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 KRT33BQ14525 404 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 ALX1Q15699 326 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 ZSCAN26Q16670 478 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 TMTC4Q5T4D3 741 aa17.03■□□□□ 0.32
PTPN13-204ENST00000436978 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.03■□□□□ 0.32
PTPN13-204ENST00000436978 MGEA5O60502 916 aa17.02■□□□□ 0.32
PTPN13-204ENST00000436978 ZNF568Q3ZCX4 644 aa17.02■□□□□ 0.32
PTPN13-204ENST00000436978 HSPH1Q92598 858 aa17.02■□□□□ 0.32
PTPN13-204ENST00000436978 ASNSD1Q9NWL6 643 aa17.02■□□□□ 0.32
PTPN13-204ENST00000436978 BAIAP2L1Q9UHR4 511 aa17.02■□□□□ 0.32
PTPN13-204ENST00000436978 LMTK2Q8IWU2 1503 aa17.02■□□□□ 0.32
PTPN13-204ENST00000436978 RWDD2BP57060 319 aa17.02■□□□□ 0.32
PTPN13-204ENST00000436978 TAB3Q8N5C8 712 aaPredicted RBP17.02■□□□□ 0.32
PTPN13-204ENST00000436978 MB21D1Q8N884 522 aa17.02■□□□□ 0.32
PTPN13-204ENST00000436978 IRAK4Q9NWZ3 460 aa17.02■□□□□ 0.32
PTPN13-204ENST00000436978 INO80Q9ULG1 1556 aaPredicted RBP17.02■□□□□ 0.32
PTPN13-204ENST00000436978 LRRD1A4D1F6 860 aa17.02■□□□□ 0.32
PTPN13-204ENST00000436978 CYP27B1O15528 508 aa17.02■□□□□ 0.32
PTPN13-204ENST00000436978 IGSF3O75054 1194 aa17.02■□□□□ 0.32
PTPN13-204ENST00000436978 CASP2P42575 452 aa17.02■□□□□ 0.32
PTPN13-204ENST00000436978 ATG16L1Q676U5 607 aa17.02■□□□□ 0.32
PTPN13-204ENST00000436978 RWDD4Q6NW29 188 aaKnown RBP17.02■□□□□ 0.32
PTPN13-204ENST00000436978 TMEM47Q9BQJ4 181 aa17.02■□□□□ 0.32
PTPN13-204ENST00000436978 FAM49AQ9H0Q0 323 aaPredicted RBP17.02■□□□□ 0.32
PTPN13-204ENST00000436978 BANK1Q8NDB2 785 aa17.02■□□□□ 0.31
PTPN13-204ENST00000436978 MRPL4Q9BYD3 311 aaKnown RBP17.02■□□□□ 0.31
PTPN13-204ENST00000436978 DRC3Q9H069 523 aa17.02■□□□□ 0.31
PTPN13-204ENST00000436978 BARHL2Q9NY43 387 aa17.02■□□□□ 0.31
PTPN13-204ENST00000436978 CYP19A1P11511 503 aaPredicted RBP17.02■□□□□ 0.31
PTPN13-204ENST00000436978 TTC13Q8NBP0 860 aa17.02■□□□□ 0.31
PTPN13-204ENST00000436978 PDZD8Q8NEN9 1154 aa17.02■□□□□ 0.31
PTPN13-204ENST00000436978 CCDC124Q96CT7 223 aaKnown RBP17.02■□□□□ 0.31
PTPN13-204ENST00000436978 CEP95Q96GE4 821 aa17.02■□□□□ 0.31
PTPN13-204ENST00000436978 C2orf54Q08AI8 447 aa17.02■□□□□ 0.31
PTPN13-204ENST00000436978 CYP26B1Q9NR63 512 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms