RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 TUBE1Q9UJT0 475 aa18.44■□□□□ 0.54
CTDSPL-204ENST00000435525 GAS2O43903 313 aaKnown RBP18.43■□□□□ 0.54
CTDSPL-204ENST00000435525 EYA4O95677 639 aa18.43■□□□□ 0.54
CTDSPL-204ENST00000435525 SSBP05455 408 aaKnown RBP eCLIP18.43■□□□□ 0.54
CTDSPL-204ENST00000435525 PLCG1P19174 1290 aa18.43■□□□□ 0.54
CTDSPL-204ENST00000435525 ATP4AP20648 1035 aa18.43■□□□□ 0.54
CTDSPL-204ENST00000435525 POLGP54098 1239 aaPredicted RBP18.43■□□□□ 0.54
CTDSPL-204ENST00000435525 PTGISQ16647 500 aa18.43■□□□□ 0.54
CTDSPL-204ENST00000435525 TPRNQ4KMQ1 711 aa18.43■□□□□ 0.54
CTDSPL-204ENST00000435525 TMEM119Q4V9L6 283 aa18.43■□□□□ 0.54
CTDSPL-204ENST00000435525 TAF2Q6P1X5 1199 aa18.43■□□□□ 0.54
CTDSPL-204ENST00000435525 SHC4Q6S5L8 630 aa18.43■□□□□ 0.54
CTDSPL-204ENST00000435525 ANO5Q75V66 913 aa18.43■□□□□ 0.54
CTDSPL-204ENST00000435525 FSIP1Q8NA03 581 aa18.43■□□□□ 0.54
CTDSPL-204ENST00000435525 TMEM87AQ8NBN3 555 aa18.43■□□□□ 0.54
CTDSPL-204ENST00000435525 LMBR1Q8WVP7 490 aa18.43■□□□□ 0.54
CTDSPL-204ENST00000435525 PLIN2Q99541 437 aa18.43■□□□□ 0.54
CTDSPL-204ENST00000435525 USP25Q9UHP3 1055 aa18.43■□□□□ 0.54
CTDSPL-204ENST00000435525 KCNH3Q9ULD8 1083 aa18.43■□□□□ 0.54
CTDSPL-204ENST00000435525 ATP11BQ9Y2G3 1177 aa18.43■□□□□ 0.54
CTDSPL-204ENST00000435525 PQBP1O60828 265 aaKnown RBP18.42■□□□□ 0.54
CTDSPL-204ENST00000435525 DGAT1O75907 488 aa18.42■□□□□ 0.54
CTDSPL-204ENST00000435525 CDK7P50613 346 aa18.42■□□□□ 0.54
CTDSPL-204ENST00000435525 RTP1P59025 263 aa18.42■□□□□ 0.54
CTDSPL-204ENST00000435525 GRB10Q13322 594 aa18.42■□□□□ 0.54
CTDSPL-204ENST00000435525 SNX17Q15036 470 aa18.42■□□□□ 0.54
CTDSPL-204ENST00000435525 ANKRD33Q7Z3H0 272 aa18.42■□□□□ 0.54
CTDSPL-204ENST00000435525 UBE2Q1Q7Z7E8 422 aa18.42■□□□□ 0.54
CTDSPL-204ENST00000435525 CEP57L1Q8IYX8 460 aa18.42■□□□□ 0.54
CTDSPL-204ENST00000435525 MAP7D2Q96T17 732 aa18.42■□□□□ 0.54
CTDSPL-204ENST00000435525 BHMT2Q9H2M3 363 aa18.42■□□□□ 0.54
CTDSPL-204ENST00000435525 MAGEF1Q9HAY2 307 aa18.42■□□□□ 0.54
CTDSPL-204ENST00000435525 BMP2KQ9NSY1 1161 aaPredicted RBP18.42■□□□□ 0.54
CTDSPL-204ENST00000435525 WRAP73Q9P2S5 460 aaPredicted RBP18.42■□□□□ 0.54
CTDSPL-204ENST00000435525 KLRC1P26715 233 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 SYKP43405 635 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 RARRES1P49788 294 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 UBE2HP62256 183 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 AMPD3Q01432 767 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 PTK7Q13308 1070 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 TRIM60Q495X7 471 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 PLA2G4FQ68DD2 849 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 GDF6Q6KF10 455 aaPredicted RBP18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 MTHFD1LQ6UB35 978 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 USP49Q70CQ1 688 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 ZNF710Q8N1W2 664 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 METTL13Q8N6R0 699 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 PDILTQ8N807 584 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 MCPH1Q8NEM0 835 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 TCP11Q8WWU5 503 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 LARP4BQ92615 738 aaKnown RBP18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 PNMA5Q96PV4 448 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 PANK2Q9BZ23 570 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 ATP6V0A4Q9HBG4 840 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 KCND2Q9NZV8 630 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 PRKAG2Q9UGJ0 569 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 GRIN2DO15399 1336 aa18.41■□□□□ 0.54
CTDSPL-204ENST00000435525 E9PMD0 336 aa18.4■□□□□ 0.54
CTDSPL-204ENST00000435525 POLR2DO15514 142 aaKnown RBP18.4■□□□□ 0.54
CTDSPL-204ENST00000435525 PRPF40AO75400 957 aaKnown RBP18.4■□□□□ 0.54
CTDSPL-204ENST00000435525 STBD1O95210 358 aa18.4■□□□□ 0.54
CTDSPL-204ENST00000435525 KRT18P05783 430 aaKnown RBP18.4■□□□□ 0.54
CTDSPL-204ENST00000435525 PLA2G4BP0C869 781 aa18.4■□□□□ 0.54
CTDSPL-204ENST00000435525 CYP2C9P11712 490 aa18.4■□□□□ 0.54
CTDSPL-204ENST00000435525 PFKFB1P16118 471 aa18.4■□□□□ 0.54
CTDSPL-204ENST00000435525 NPEPPSP55786 919 aa18.4■□□□□ 0.54
CTDSPL-204ENST00000435525 CDC42EP1Q00587 391 aa18.4■□□□□ 0.54
CTDSPL-204ENST00000435525 TLE2Q04725 743 aa18.4■□□□□ 0.54
CTDSPL-204ENST00000435525 BFSP2Q13515 415 aa18.4■□□□□ 0.54
CTDSPL-204ENST00000435525 TARBP2Q15633 366 aaKnown RBP18.4■□□□□ 0.54
CTDSPL-204ENST00000435525 ECM1Q16610 540 aa18.4■□□□□ 0.54
CTDSPL-204ENST00000435525 SV2BQ7L1I2 683 aa18.4■□□□□ 0.54
CTDSPL-204ENST00000435525 RAD54LQ92698 747 aa18.4■□□□□ 0.54
CTDSPL-204ENST00000435525 DHX58Q96C10 678 aa18.4■□□□□ 0.54
CTDSPL-204ENST00000435525 TIPINQ9BVW5 301 aa18.4■□□□□ 0.54
CTDSPL-204ENST00000435525 PCDHA2Q9Y5H9 948 aa18.4■□□□□ 0.54
CTDSPL-204ENST00000435525 FRMPD3Q5JV73 1810 aa18.39■□□□□ 0.54
CTDSPL-204ENST00000435525 A0A1B0GVL5 298 aa18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 SMIM35A0A1B0GVV1 85 aa18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 MBLAC1A4D2B0 266 aaPredicted RBP18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 M0QZ92 97 aa18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 USO1O60763 962 aaKnown RBP18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 MAFO75444 373 aaPredicted RBP18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 PTMSP20962 102 aa18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 HOXC8P31273 242 aa18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 LRRC26Q2I0M4 334 aa18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 PADI6Q6TGC4 694 aa18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 FAM126BQ8IXS8 530 aa18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 NME8Q8N427 588 aa18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 SYT2Q8N9I0 419 aaPredicted RBP18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 TRAPPC12Q8WVT3 735 aa18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 MTRQ99707 1265 aa18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 TRPV6Q9H1D0 765 aa18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 SUGCTQ9HAC7 445 aa18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 TRMT13Q9NUP7 481 aaKnown RBP18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 HOOK1Q9UJC3 728 aaKnown RBP18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 HTTP42858 3142 aa18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 MYH15Q9Y2K3 1946 aa18.39■□□□□ 0.53
CTDSPL-204ENST00000435525 KIAA0100Q14667 2235 aaKnown RBP18.38■□□□□ 0.53
CTDSPL-204ENST00000435525 ZBTB39O15060 712 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms