RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 RAD17O75943 681 aa6.96□□□□□ -1.3
NIPAL3-205ENST00000432012 IFIT1P09914 478 aaKnown RBP6.96□□□□□ -1.3
NIPAL3-205ENST00000432012 PF4V1P10720 104 aa6.96□□□□□ -1.3
NIPAL3-205ENST00000432012 NRLP54845 237 aa6.96□□□□□ -1.3
NIPAL3-205ENST00000432012 TBC1D10BQ4KMP7 808 aaPredicted RBP6.96□□□□□ -1.3
NIPAL3-205ENST00000432012 VPS53Q5VIR6 699 aa6.96□□□□□ -1.3
NIPAL3-205ENST00000432012 HGSNATQ68CP4 663 aa6.96□□□□□ -1.3
NIPAL3-205ENST00000432012 POTEGQ6S5H5 508 aa6.96□□□□□ -1.3
NIPAL3-205ENST00000432012 SYDE1Q6ZW31 735 aaPredicted RBP6.96□□□□□ -1.3
NIPAL3-205ENST00000432012 PPP1R42Q7Z4L9 355 aa6.96□□□□□ -1.3
NIPAL3-205ENST00000432012 KIF1BPQ96EK5 621 aa6.96□□□□□ -1.3
NIPAL3-205ENST00000432012 ZSCAN31Q96LW9 406 aaPredicted RBP6.96□□□□□ -1.3
NIPAL3-205ENST00000432012 GDF15Q99988 308 aa6.96□□□□□ -1.3
NIPAL3-205ENST00000432012 DHRS4Q9BTZ2 278 aa6.96□□□□□ -1.3
NIPAL3-205ENST00000432012 SH2B1Q9NRF2 756 aaPredicted RBP6.96□□□□□ -1.3
NIPAL3-205ENST00000432012 FAM205AQ6ZU69 1335 aa6.96□□□□□ -1.3
NIPAL3-205ENST00000432012 A6NNZ2 444 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 RNF223E7ERA6 249 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 SASH3O75995 380 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 KIF20AO95235 890 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 MT-CO1P00395 513 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 CPA1P15085 419 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 ATP4AP20648 1035 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 PURAQ00577 322 aaKnown RBP6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 MPP2Q14168 576 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 KIF22Q14807 665 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 SPRYD7Q5W111 196 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 HEATR6Q6AI08 1181 aaKnown RBP6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 ZNF449Q6P9G9 518 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 DPP8Q6V1X1 898 aaPredicted RBP6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 CCNJLQ8IV13 435 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 PASD1Q8IV76 773 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 TDHQ8IZJ6 230 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 PAWRQ96IZ0 340 aaKnown RBP6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 HERPUD2Q9BSE4 406 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 NAA15Q9BXJ9 866 aaKnown RBP6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 FBRSQ9HAH7 460 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 PDRG1Q9NUG6 133 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 GPN3Q9UHW5 284 aaPredicted RBP6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 NIP7Q9Y221 180 aaKnown RBP eCLIP6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 VPS37CA5D8V6 355 aaPredicted RBP6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 WTIPA6NIX2 430 aaPredicted RBP6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 SRGAP3O43295 1099 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 SUSD5O60279 629 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 CD4P01730 458 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 GJB1P08034 283 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 PTGS1P23219 599 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 CHKAP35790 457 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 UBA7P41226 1012 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 DHX9Q08211 1270 aaKnown RBP6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 SP8Q8IXZ3 490 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 JAKMIP1Q96N16 626 aaKnown RBP6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 NUP62CLQ9H1M0 184 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 R3HDMLQ9H3Y0 253 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 BLOC1S4Q9NUP1 217 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 TMCC3Q9ULS5 477 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 ELP1O95163 1332 aa6.95□□□□□ -1.3
NIPAL3-205ENST00000432012 TBX1O43435 398 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 BBOX1O75936 387 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 ADH1AP07327 375 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 U2AF2P26368 475 aaKnown RBP eCLIP6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 KRT85P78386 507 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 IRX3P78415 501 aaPredicted RBP6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 ST3GAL1Q11201 340 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 ADCK5Q3MIX3 580 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 SLC6A19Q695T7 634 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 KIAA1211LQ6NV74 962 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 Q7L0L9 218 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 ANKRD23Q86SG2 305 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 RUFY2Q8WXA3 655 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 GAL3ST3Q96A11 431 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 TBC1D31Q96DN5 1066 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 P2RX7Q99572 595 aaKnown RBP6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 RUSC1Q9BVN2 902 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 TM6SF1Q9BZW5 370 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 ZCCHC2Q9C0B9 1178 aaKnown RBP6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 CYP46A1Q9Y6A2 500 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 TTC41PQ6P2S7 1318 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 DNAJC25-GNG10A0A024R161 153 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 GNAT3A8MTJ3 354 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 UBE2Q2LH0YL09 131 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 KHNYNO15037 678 aaKnown RBP6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 RNMTO43148 476 aaKnown RBP6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 GLRX3O76003 335 aaKnown RBP6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 FARP2O94887 1054 aaPredicted RBP6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 ADH1CP00326 375 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 TYRO3Q06418 890 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 ODF1Q14990 250 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 KIAA1614Q5VZ46 1190 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 LUZP1Q86V48 1076 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 RHBDD1Q8TEB9 315 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 OSMRQ99650 979 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 CDC23Q9UJX2 597 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 RABL2BQ9UNT1 228 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 TNPO3Q9Y5L0 923 aaKnown RBP6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 FRMPD2Q68DX3 1309 aaPredicted RBP6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 CCDC171Q6TFL3 1326 aa6.94□□□□□ -1.3
NIPAL3-205ENST00000432012 SMTNL1A8MU46 457 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms