RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 ZMYND8Q9ULU4 1186 aaPredicted RBP20.61■□□□□ 0.89
RFTN1-202ENST00000431547 MKI67P46013 3256 aaKnown RBP20.6■□□□□ 0.89
RFTN1-202ENST00000431547 SMIM35A0A1B0GVV1 85 aa20.6■□□□□ 0.89
RFTN1-202ENST00000431547 TMEM150BA6NC51 233 aa20.6■□□□□ 0.89
RFTN1-202ENST00000431547 PITPNM1O00562 1244 aa20.6■□□□□ 0.89
RFTN1-202ENST00000431547 ZBTB39O15060 712 aa20.6■□□□□ 0.89
RFTN1-202ENST00000431547 C22orf31O95567 290 aa20.6■□□□□ 0.89
RFTN1-202ENST00000431547 RAG1P15918 1043 aa20.6■□□□□ 0.89
RFTN1-202ENST00000431547 SYN1P17600 705 aa20.6■□□□□ 0.89
RFTN1-202ENST00000431547 ITGB8P26012 769 aa20.6■□□□□ 0.89
RFTN1-202ENST00000431547 KRT85P78386 507 aa20.6■□□□□ 0.89
RFTN1-202ENST00000431547 TRIM71Q2Q1W2 868 aaKnown RBP20.6■□□□□ 0.89
RFTN1-202ENST00000431547 KCTD17Q8N5Z5 321 aa20.6■□□□□ 0.89
RFTN1-202ENST00000431547 KCNG4Q8TDN1 519 aa20.6■□□□□ 0.89
RFTN1-202ENST00000431547 CSRNP2Q9H175 543 aa20.6■□□□□ 0.89
RFTN1-202ENST00000431547 CYP26B1Q9NR63 512 aa20.6■□□□□ 0.89
RFTN1-202ENST00000431547 CAND2O75155 1236 aa20.59■□□□□ 0.89
RFTN1-202ENST00000431547 RPLP2P05387 115 aaKnown RBP20.59■□□□□ 0.89
RFTN1-202ENST00000431547 UBA7P41226 1012 aa20.59■□□□□ 0.89
RFTN1-202ENST00000431547 NPEPPSP55786 919 aa20.59■□□□□ 0.89
RFTN1-202ENST00000431547 ECM1Q16610 540 aa20.59■□□□□ 0.89
RFTN1-202ENST00000431547 MTERF2Q49AM1 385 aa20.59■□□□□ 0.89
RFTN1-202ENST00000431547 HYIQ5T013 277 aa20.59■□□□□ 0.89
RFTN1-202ENST00000431547 PLA2G4FQ68DD2 849 aa20.59■□□□□ 0.89
RFTN1-202ENST00000431547 POTEGQ6S5H5 508 aa20.59■□□□□ 0.89
RFTN1-202ENST00000431547 RUFY4Q6ZNE9 571 aa20.59■□□□□ 0.89
RFTN1-202ENST00000431547 RETREG2Q8NC44 543 aa20.59■□□□□ 0.89
RFTN1-202ENST00000431547 PIGOQ8TEQ8 1089 aa20.59■□□□□ 0.89
RFTN1-202ENST00000431547 WNT8BQ93098 351 aa20.59■□□□□ 0.89
RFTN1-202ENST00000431547 ZBTB10Q96DT7 871 aa20.59■□□□□ 0.89
RFTN1-202ENST00000431547 CEP170P1Q96L14 293 aa20.59■□□□□ 0.89
RFTN1-202ENST00000431547 CLIC6Q96NY7 704 aa20.59■□□□□ 0.89
RFTN1-202ENST00000431547 DBR1Q9UK59 544 aaKnown RBP20.59■□□□□ 0.89
RFTN1-202ENST00000431547 KIAA1024Q9UPX6 916 aa20.59■□□□□ 0.89
RFTN1-202ENST00000431547 H0YGN5 161 aa20.58■□□□□ 0.89
RFTN1-202ENST00000431547 MAFO75444 373 aaPredicted RBP20.58■□□□□ 0.89
RFTN1-202ENST00000431547 CKBP12277 381 aa20.58■□□□□ 0.89
RFTN1-202ENST00000431547 TBC1D8BQ0IIM8 1120 aa20.58■□□□□ 0.89
RFTN1-202ENST00000431547 XKR9Q5GH70 373 aa20.58■□□□□ 0.89
RFTN1-202ENST00000431547 CABP7Q86V35 215 aa20.58■□□□□ 0.89
RFTN1-202ENST00000431547 EXOC8Q8IYI6 725 aa20.58■□□□□ 0.89
RFTN1-202ENST00000431547 ZNF579Q8NAF0 562 aaKnown RBP20.58■□□□□ 0.89
RFTN1-202ENST00000431547 PPP1R12CQ9BZL4 782 aa20.58■□□□□ 0.89
RFTN1-202ENST00000431547 CHMP5Q9NZZ3 219 aa20.58■□□□□ 0.89
RFTN1-202ENST00000431547 ALPK3Q96L96 1907 aa20.58■□□□□ 0.88
RFTN1-202ENST00000431547 UMODL1Q5DID0 1318 aa20.57■□□□□ 0.88
RFTN1-202ENST00000431547 KDM3AQ9Y4C1 1321 aa20.57■□□□□ 0.88
RFTN1-202ENST00000431547 A0A087WWV3 80 aa20.57■□□□□ 0.88
RFTN1-202ENST00000431547 IGKV6-21A0A0C4DH24 114 aa20.57■□□□□ 0.88
RFTN1-202ENST00000431547 CYP2C18P33260 490 aa20.57■□□□□ 0.88
RFTN1-202ENST00000431547 THPOP40225 353 aa20.57■□□□□ 0.88
RFTN1-202ENST00000431547 RARRES1P49788 294 aa20.57■□□□□ 0.88
RFTN1-202ENST00000431547 MFSD5Q6N075 450 aa20.57■□□□□ 0.88
RFTN1-202ENST00000431547 RSPH3Q86UC2 560 aa20.57■□□□□ 0.88
RFTN1-202ENST00000431547 KIAA0319LQ8IZA0 1049 aa20.57■□□□□ 0.88
RFTN1-202ENST00000431547 NME8Q8N427 588 aa20.57■□□□□ 0.88
RFTN1-202ENST00000431547 LINC01465Q8N7H1 131 aa20.57■□□□□ 0.88
RFTN1-202ENST00000431547 DNAJB3Q8WWF6 145 aa20.57■□□□□ 0.88
RFTN1-202ENST00000431547 CHAMP1Q96JM3 812 aa20.57■□□□□ 0.88
RFTN1-202ENST00000431547 JPH2Q9BR39 696 aaPredicted RBP20.57■□□□□ 0.88
RFTN1-202ENST00000431547 SH2D3AQ9BRG2 576 aa20.57■□□□□ 0.88
RFTN1-202ENST00000431547 CCSER1Q9C0I3 900 aa20.57■□□□□ 0.88
RFTN1-202ENST00000431547 SCAND2PQ9GZW5 306 aaPredicted RBP20.57■□□□□ 0.88
RFTN1-202ENST00000431547 NT5C3AQ9H0P0 336 aa20.57■□□□□ 0.88
RFTN1-202ENST00000431547 DDX19AQ9NUU7 478 aaKnown RBP20.57■□□□□ 0.88
RFTN1-202ENST00000431547 DNM3Q9UQ16 869 aa20.57■□□□□ 0.88
RFTN1-202ENST00000431547 CUTAO60888 179 aa20.56■□□□□ 0.88
RFTN1-202ENST00000431547 SELPP16109 830 aa20.56■□□□□ 0.88
RFTN1-202ENST00000431547 NCLP19338 710 aaKnown RBP20.56■□□□□ 0.88
RFTN1-202ENST00000431547 RFC5P40937 340 aa20.56■□□□□ 0.88
RFTN1-202ENST00000431547 EFCAB12Q6NXP0 572 aa20.56■□□□□ 0.88
RFTN1-202ENST00000431547 METTL13Q8N6R0 699 aa20.56■□□□□ 0.88
RFTN1-202ENST00000431547 LEO1Q8WVC0 666 aaPredicted RBP20.56■□□□□ 0.88
RFTN1-202ENST00000431547 BADQ92934 168 aa20.56■□□□□ 0.88
RFTN1-202ENST00000431547 CALML4Q96GE6 196 aa20.56■□□□□ 0.88
RFTN1-202ENST00000431547 EPSTI1Q96J88 318 aa20.56■□□□□ 0.88
RFTN1-202ENST00000431547 PNMA5Q96PV4 448 aa20.56■□□□□ 0.88
RFTN1-202ENST00000431547 LBHD1Q9BQE6 289 aaPredicted RBP20.56■□□□□ 0.88
RFTN1-202ENST00000431547 WNT8AQ9H1J5 351 aa20.56■□□□□ 0.88
RFTN1-202ENST00000431547 DHX33Q9H6R0 707 aaKnown RBP20.56■□□□□ 0.88
RFTN1-202ENST00000431547 IQCF3P0C7M6 154 aa20.55■□□□□ 0.88
RFTN1-202ENST00000431547 TMOD1P28289 359 aa20.55■□□□□ 0.88
RFTN1-202ENST00000431547 ME1P48163 572 aa20.55■□□□□ 0.88
RFTN1-202ENST00000431547 GRB10Q13322 594 aa20.55■□□□□ 0.88
RFTN1-202ENST00000431547 TMEM119Q4V9L6 283 aa20.55■□□□□ 0.88
RFTN1-202ENST00000431547 FAM26DQ5JW98 314 aa20.55■□□□□ 0.88
RFTN1-202ENST00000431547 SPECC1Q5M775 1068 aa20.55■□□□□ 0.88
RFTN1-202ENST00000431547 AXDND1Q5T1B0 1012 aaPredicted RBP20.55■□□□□ 0.88
RFTN1-202ENST00000431547 ZNF618Q5T7W0 954 aa20.55■□□□□ 0.88
RFTN1-202ENST00000431547 TRAF7Q6Q0C0 670 aa20.55■□□□□ 0.88
RFTN1-202ENST00000431547 USP49Q70CQ1 688 aa20.55■□□□□ 0.88
RFTN1-202ENST00000431547 LRRC8DQ7L1W4 858 aa20.55■□□□□ 0.88
RFTN1-202ENST00000431547 TMEM199Q8N511 208 aa20.55■□□□□ 0.88
RFTN1-202ENST00000431547 SLC7A3Q8WY07 619 aa20.55■□□□□ 0.88
RFTN1-202ENST00000431547 SYMPKQ92797 1274 aaKnown RBP20.55■□□□□ 0.88
RFTN1-202ENST00000431547 CDK5RAP3Q96JB5 506 aa20.55■□□□□ 0.88
RFTN1-202ENST00000431547 SPATA32Q96LK8 384 aa20.55■□□□□ 0.88
RFTN1-202ENST00000431547 FAM49AQ9H0Q0 323 aaPredicted RBP20.55■□□□□ 0.88
RFTN1-202ENST00000431547 SUGCTQ9HAC7 445 aa20.55■□□□□ 0.88
RFTN1-202ENST00000431547 PCDHA7Q9UN72 937 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms