RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 UBA6A0AVT1 1052 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 PRSS38A1L453 326 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 KLHL33A6NCF5 533 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 ZNF839A8K0R7 811 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 NFIBO00712 420 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 HYAL3O43820 417 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 SNUPNO95149 360 aaKnown RBP4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 MPOP05164 745 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 U2AF1L5P0DN76 240 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 PF4V1P10720 104 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 MC4RP32245 332 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 AFMP43652 599 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 U2AF1Q01081 240 aaKnown RBP eCLIP4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 GTF2H3Q13889 308 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 STILQ15468 1287 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 TTC38Q5R3I4 469 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 KIAA1841Q6NSI8 718 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 PGM2L1Q6PCE3 622 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 EP400NLQ6ZTU2 488 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 ESPNLQ6ZVH7 1005 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 ATG4DQ86TL0 474 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 WDR75Q8IWA0 830 aaKnown RBP4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 TP53INP2Q8IXH6 220 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 SIRT2Q8IXJ6 389 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 E2F7Q96AV8 911 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 RUNDC1Q96C34 613 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 TOE1Q96GM8 510 aaKnown RBP4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 SLC6A17Q9H1V8 727 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 POFUT1Q9H488 388 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 ANLNQ9NQW6 1124 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 MKS1Q9NXB0 559 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 TUBD1Q9UJT1 453 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 GPR45Q9Y5Y3 372 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 NUMBLQ9Y6R0 609 aa4.18□□□□□ -1.74
HMGB1P27-201ENST00000431429 NUDT19A8MXV4 375 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 PRPF6O94906 941 aaKnown RBP4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 ASGR2P07307 311 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 VCAM1P19320 739 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 C5AR1P21730 350 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 SDHBP21912 280 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 PTGS1P23219 599 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 AKAP5P24588 427 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 CYP2C19P33261 490 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 ADKP55263 362 aaKnown RBP4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 SRSF2Q01130 221 aaKnown RBP4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 TRIM25Q14258 630 aaKnown RBP4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 GALEQ14376 348 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 GBX1Q14549 363 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 RAB3GAP1Q15042 981 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 MUM1Q2TAK8 710 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 GFOD2Q3B7J2 385 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 MAP9Q49MG5 647 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 CT83Q5H943 113 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 RRP12Q5JTH9 1297 aaKnown RBP4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 ZC3H14Q6PJT7 736 aaKnown RBP4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 UNQ6494/PRO21346Q6UXR6 183 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 LIPIQ6XZB0 460 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 ETV3LQ6ZN32 361 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 DGKHQ86XP1 1220 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 CCDC146Q8IYE0 955 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 C7orf31Q8N865 590 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 DTX3Q8N9I9 347 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 TSPEARQ8WU66 669 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 TGFBRAP1Q8WUH2 860 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 EAF2Q96CJ1 260 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 HSPBAP1Q96EW2 488 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 KIRREL1Q96J84 757 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 MYL10Q9BUA6 226 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 ARNT2Q9HBZ2 717 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 PCMTD2Q9NV79 361 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 OBP2AQ9NY56 170 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 SCOCQ9UIL1 159 aa4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 NOB1Q9ULX3 412 aaKnown RBP4.17□□□□□ -1.74
HMGB1P27-201ENST00000431429 PRAMEF22A3QJZ6 481 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 OR14I1A6ND48 311 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 ABLIM1O14639 778 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 CAND2O75155 1236 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 C8BP07358 591 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 CELA3BP08861 270 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 CLEC2LP0C7M8 214 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 ATF3P18847 181 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 WASP42768 502 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 TMEM62Q0P6H9 643 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 TCIRG1Q13488 830 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 UGT8Q16880 541 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 ANO4Q32M45 955 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 TOR2AQ5JU69 321 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 ADGRF1Q5T601 910 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 PRAMEF18Q5VWM3 479 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 KANK2Q63ZY3 851 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 PNMA8AQ86V59 439 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 FBXO41Q8TF61 875 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 RSAD2Q8WXG1 361 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 RAX2Q96IS3 184 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 RNF38Q9H0F5 515 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 ZNF700Q9H0M5 742 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 KCTD10Q9H3F6 313 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 ZNF552Q9H707 407 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms