RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 IGKV6D-41A0A0C4DH26 115 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 POTEFA5A3E0 1075 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 H0YIN7 160 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 MED24O75448 989 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 FLOT1O75955 427 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 POTEIP0CG38 1075 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 IL1R1P14778 569 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 PON1P27169 355 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 STAT3P40763 770 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 POTEGQ6S5H5 508 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 POTEEQ6S8J3 1075 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 PEX26Q7Z412 305 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 RBM46Q8TBY0 533 aaKnown RBP16.39■□□□□ 0.21
LINC00839-202ENST00000429940 MASTLQ96GX5 879 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 CABS1Q96KC9 395 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 GGA2Q9UJY4 613 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 USP17L10C9JJH3 530 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 CCDC188H7C350 402 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 ZBTB5O15062 677 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 XRCC5P13010 732 aaKnown RBP16.39■□□□□ 0.21
LINC00839-202ENST00000429940 IRX3P78415 501 aaPredicted RBP16.39■□□□□ 0.21
LINC00839-202ENST00000429940 BIRC3Q13489 604 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 DCAF17Q5H9S7 520 aaPredicted RBP16.39■□□□□ 0.21
LINC00839-202ENST00000429940 RUFY4Q6ZNE9 571 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 UBLCP1Q8WVY7 318 aaPredicted RBP16.39■□□□□ 0.21
LINC00839-202ENST00000429940 DHX36Q9H2U1 1008 aaKnown RBP16.39■□□□□ 0.21
LINC00839-202ENST00000429940 BCCIPQ9P287 314 aaKnown RBP eCLIP16.39■□□□□ 0.21
LINC00839-202ENST00000429940 SWAP70Q9UH65 585 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 TRAF3IP3Q9Y228 551 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 FOCADQ5VW36 1801 aa16.39■□□□□ 0.21
LINC00839-202ENST00000429940 SLX4Q8IY92 1834 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 BHMG1C9JSJ3 638 aaPredicted RBP16.38■□□□□ 0.21
LINC00839-202ENST00000429940 PRKCIP41743 596 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 GABPAQ06546 454 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 IFT88Q13099 833 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 KNOP1Q1ED39 458 aaKnown RBP16.38■□□□□ 0.21
LINC00839-202ENST00000429940 LMBR1Q8WVP7 490 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 CYFIP2Q96F07 1278 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 KCNMB3Q9NPA1 279 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 FBXL5Q9UKA1 691 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 USP17L15C9J2P7 530 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 USP17L13C9JLJ4 530 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 USP17L11C9JVI0 530 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 USP17L18D6R9N7 530 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 USP17L22D6RA61 530 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 USP17L17D6RBQ6 530 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 USP17L19D6RCP7 530 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 USP17L20D6RJB6 530 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 SLC26A4O43511 780 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 ZBTB48P10074 688 aaPredicted RBP16.38■□□□□ 0.21
LINC00839-202ENST00000429940 SETQ01105 290 aaPredicted RBP16.38■□□□□ 0.21
LINC00839-202ENST00000429940 PPARDQ03181 441 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 USP17L24Q0WX57 530 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 MTMR3Q13615 1198 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 USP17L6PQ6QN14 398 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 KCTD1Q719H9 257 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 VPS36Q86VN1 386 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 AMACRQ9UHK6 382 aa16.38■□□□□ 0.21
LINC00839-202ENST00000429940 GMNCA6NCL1 334 aa16.37■□□□□ 0.21
LINC00839-202ENST00000429940 C6orf229H3BNL8 230 aa16.37■□□□□ 0.21
LINC00839-202ENST00000429940 DAPK3O43293 454 aa16.37■□□□□ 0.21
LINC00839-202ENST00000429940 H2AFZP0C0S5 128 aa16.37■□□□□ 0.21
LINC00839-202ENST00000429940 ITGA4P13612 1032 aa16.37■□□□□ 0.21
LINC00839-202ENST00000429940 GIT2Q14161 759 aa16.37■□□□□ 0.21
LINC00839-202ENST00000429940 ODF2Q5BJF6 829 aa16.37■□□□□ 0.21
LINC00839-202ENST00000429940 GPATCH4Q5T3I0 446 aaKnown RBP16.37■□□□□ 0.21
LINC00839-202ENST00000429940 TCERG1LQ5VWI1 586 aa16.37■□□□□ 0.21
LINC00839-202ENST00000429940 H2AFVQ71UI9 128 aa16.37■□□□□ 0.21
LINC00839-202ENST00000429940 SLC16A10Q8TF71 515 aa16.37■□□□□ 0.21
LINC00839-202ENST00000429940 SUCLA2Q9P2R7 463 aaPredicted RBP16.37■□□□□ 0.21
LINC00839-202ENST00000429940 SLC12A6Q9UHW9 1150 aa16.37■□□□□ 0.21
LINC00839-202ENST00000429940 RIMBP2O15034 1052 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 CALUO43852 315 aaPredicted RBP16.36■□□□□ 0.21
LINC00839-202ENST00000429940 ATP2B4P23634 1241 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 ANXA13P27216 316 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 FLT3P36888 993 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 ACTN3Q08043 901 aaPredicted RBP16.36■□□□□ 0.21
LINC00839-202ENST00000429940 EPHA7Q15375 998 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 KCTD19Q17RG1 926 aaPredicted RBP16.36■□□□□ 0.21
LINC00839-202ENST00000429940 SLFN11Q7Z7L1 901 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 DAAM2Q86T65 1068 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 SFR1Q86XK3 245 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 SYCE1Q8N0S2 351 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 RASGEF1CQ8N431 466 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 CCDC26Q8TAB7 109 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 SLITRK6Q9H5Y7 841 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 VCPKMTQ9H867 229 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 GGA1Q9UJY5 639 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 NENFQ9UMX5 172 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 STXBP5LQ9Y2K9 1186 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 DAGLAQ9Y4D2 1042 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 A0A0A6YYK5 440 aaPredicted RBP16.36■□□□□ 0.21
LINC00839-202ENST00000429940 AKAP3O75969 853 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 ALDH1B1P30837 517 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 HOXD13P35453 343 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 CATSPER3Q86XQ3 398 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 SLFN12Q8IYM2 578 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 TBC1D16Q8TBP0 767 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 TBC1D22AQ8WUA7 517 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 REEP2Q9BRK0 252 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms