RNA–Protein interactions for RNA: ENST00000429804.7

CTCFL-207, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 3,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-207ENST00000429804 AIPL1Q9NZN9 384 aa11.81□□□□□ -0.52
CTCFL-207ENST00000429804 AMFRQ9UKV5 643 aa11.81□□□□□ -0.52
CTCFL-207ENST00000429804 NOC2LQ9Y3T9 749 aaKnown RBP11.81□□□□□ -0.52
CTCFL-207ENST00000429804 TLDC2A0PJX2 215 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 SNHG28P0DPA3 235 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 PON1P27169 355 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 ALDH1B1P30837 517 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 CDR1P51861 262 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 SEC24CP53992 1094 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 KRT71Q3SY84 523 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 C15orf52Q6ZUT6 534 aaKnown RBP11.8□□□□□ -0.52
CTCFL-207ENST00000429804 FRMD5Q7Z6J6 570 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 KCTD10Q9H3F6 313 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 UTP11Q9Y3A2 253 aaKnown RBP11.8□□□□□ -0.52
CTCFL-207ENST00000429804 PCDHGC5Q9Y5F6 944 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 ZNF233A6NK53 670 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 TNFAIP3P21580 790 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 GABPAQ06546 454 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 ARSHQ5FYA8 562 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 C10orf76Q5T2E6 689 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 GLYCTKQ8IVS8 523 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 KSR1Q8IVT5 923 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 CERS5Q8N5B7 392 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 ATP6V1G3Q96LB4 118 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 GANQ9H2C0 597 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 GDF3Q9NR23 364 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 FRMD4BQ9Y2L6 1034 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 F5H6K3 240 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 RBAK-RBAKDNI3L0D1 243 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 DAPK3O43293 454 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 LRRN2O75325 713 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 NMT1P30419 496 aaKnown RBP11.8□□□□□ -0.52
CTCFL-207ENST00000429804 KLRC3Q07444 240 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 SLC20A2Q08357 652 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 KCNA1Q09470 495 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 SYCE1Q8N0S2 351 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 CYP2W1Q8TAV3 490 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 INPP4AQ96PE3 977 aaPredicted RBP11.8□□□□□ -0.52
CTCFL-207ENST00000429804 BCS1LQ9Y276 419 aa11.8□□□□□ -0.52
CTCFL-207ENST00000429804 LSP1P33241 339 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 SLC12A3P55017 1021 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 CCDC174Q6PII3 467 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 ARHGAP27Q6ZUM4 889 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 ZNF572Q7Z3I7 529 aaPredicted RBP11.79□□□□□ -0.52
CTCFL-207ENST00000429804 METTL13Q8N6R0 699 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 TYW1Q9NV66 732 aaKnown RBP11.79□□□□□ -0.52
CTCFL-207ENST00000429804 GOLGA6L10A0A0M3HER8 536 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 DDX39AO00148 427 aaKnown RBP11.79□□□□□ -0.52
CTCFL-207ENST00000429804 FGGP02679 453 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 PDE6BP35913 854 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 CRKP46108 304 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 AP3B2Q13367 1082 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 ZYXQ15942 572 aaKnown RBP11.79□□□□□ -0.52
CTCFL-207ENST00000429804 ZC2HC1CQ53FD0 456 aaPredicted RBP11.79□□□□□ -0.52
CTCFL-207ENST00000429804 MSL1Q68DK7 614 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 RUSC1Q9BVN2 902 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 CCDC113Q9H0I3 377 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 PITPNM2Q9BZ72 1349 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 PDXKO00764 312 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 EXOC3O60645 756 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 SHOX2O60902 331 aaPredicted RBP11.79□□□□□ -0.52
CTCFL-207ENST00000429804 FERP16591 822 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 IBSPP21815 317 aaPredicted RBP11.79□□□□□ -0.52
CTCFL-207ENST00000429804 CLK2P49760 499 aaKnown RBP11.79□□□□□ -0.52
CTCFL-207ENST00000429804 ERVK-9P63128 1117 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 IFT88Q13099 833 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 ABCB5Q2M3G0 1257 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 RUFY4Q6ZNE9 571 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 FLAD1Q8NFF5 587 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 CRAMP1Q96RY5 1269 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 SH3GL2Q99962 352 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 EIF2AK1Q9BQI3 630 aaKnown RBP11.79□□□□□ -0.52
CTCFL-207ENST00000429804 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.79□□□□□ -0.522e-13■□□□□ 8.7
CTCFL-207ENST00000429804 CELF4Q9BZC1 486 aaKnown RBP11.79□□□□□ -0.52
CTCFL-207ENST00000429804 IKZF4Q9H2S9 585 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 BCAS3Q9H6U6 928 aa11.79□□□□□ -0.52
CTCFL-207ENST00000429804 GOLGA6L7A0A1B0GV03 622 aa11.78□□□□□ -0.52
CTCFL-207ENST00000429804 HMGB1P1B2RPK0 211 aaPredicted RBP11.78□□□□□ -0.52
CTCFL-207ENST00000429804 BACH1O14867 736 aa11.78□□□□□ -0.52
CTCFL-207ENST00000429804 TRIM49P0CI25 452 aa11.78□□□□□ -0.52
CTCFL-207ENST00000429804 TRIM49CP0CI26 452 aa11.78□□□□□ -0.52
CTCFL-207ENST00000429804 ITGA4P13612 1032 aa11.78□□□□□ -0.52
CTCFL-207ENST00000429804 RPA1P27694 616 aa11.78□□□□□ -0.52
CTCFL-207ENST00000429804 DHX9Q08211 1270 aaKnown RBP11.78□□□□□ -0.52
CTCFL-207ENST00000429804 FAM178BQ8IXR5 827 aa11.78□□□□□ -0.52
CTCFL-207ENST00000429804 FBXL5Q9UKA1 691 aa11.78□□□□□ -0.52
CTCFL-207ENST00000429804 ATP8A1Q9Y2Q0 1164 aa11.78□□□□□ -0.52
CTCFL-207ENST00000429804 KIAA1551Q9HCM1 1747 aa11.78□□□□□ -0.52
CTCFL-207ENST00000429804 TTI1O43156 1089 aa11.78□□□□□ -0.52
CTCFL-207ENST00000429804 PPP1R37O75864 691 aa11.78□□□□□ -0.52
CTCFL-207ENST00000429804 FOSP01100 380 aaPredicted RBP11.78□□□□□ -0.52
CTCFL-207ENST00000429804 PSMC2P35998 433 aaKnown RBP11.78□□□□□ -0.52
CTCFL-207ENST00000429804 CUL1Q13616 776 aa11.78□□□□□ -0.52
CTCFL-207ENST00000429804 SYDE2Q5VT97 1194 aa11.78□□□□□ -0.52
CTCFL-207ENST00000429804 FBXW10Q5XX13 1052 aa11.78□□□□□ -0.52
CTCFL-207ENST00000429804 STXBP4Q6ZWJ1 553 aa11.78□□□□□ -0.52
CTCFL-207ENST00000429804 SYT2Q8N9I0 419 aaPredicted RBP11.78□□□□□ -0.52
CTCFL-207ENST00000429804 TPCN2Q8NHX9 752 aa11.78□□□□□ -0.52
CTCFL-207ENST00000429804 KCNMB3Q9NPA1 279 aa11.78□□□□□ -0.52
CTCFL-207ENST00000429804 PI4KBQ9UBF8 816 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms