RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 STIM2Q9P246 746 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 DDX25Q9UHL0 483 aaKnown RBP9.56□□□□□ -0.88
GABPB1-205ENST00000429662 FEZ2Q9UHY8 353 aaPredicted RBP9.56□□□□□ -0.88
GABPB1-205ENST00000429662 VPS9D1Q9Y2B5 631 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 PTPN22Q9Y2R2 807 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 RRP15Q9Y3B9 282 aaKnown RBP9.56□□□□□ -0.88
GABPB1-205ENST00000429662 MYH8P13535 1937 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 GOLGA6CA6NDK9 693 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 MYO1CO00159 1063 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 PDE2AO00408 941 aaPredicted RBP9.55□□□□□ -0.88
GABPB1-205ENST00000429662 HSF2BPO75031 334 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 UFL1O94874 794 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 MOCS3O95396 460 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 GOLGA6DP0CG33 693 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 ZNF280AP59817 542 aaPredicted RBP9.55□□□□□ -0.88
GABPB1-205ENST00000429662 GABPAQ06546 454 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 C2orf54Q08AI8 447 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 ZNF543Q08ER8 600 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 COASYQ13057 564 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 NAB2Q15742 525 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 SLC4A8Q2Y0W8 1093 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 DNAJC21Q5F1R6 531 aaKnown RBP9.55□□□□□ -0.88
GABPB1-205ENST00000429662 MFSD14BQ5SR56 506 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 HAUS3Q68CZ6 603 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 C8orf74Q6P047 294 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 LRRC31Q6UY01 552 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 FMNL3Q8IVF7 1028 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 ZNF454Q8N9F8 522 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 DCPSQ96C86 337 aaKnown RBP9.55□□□□□ -0.88
GABPB1-205ENST00000429662 DNAJC19Q96DA6 116 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 MTMR8Q96EF0 704 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 SH3GL2Q99962 352 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 MXD3Q9BW11 206 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 COL25A1Q9BXS0 654 aaPredicted RBP9.55□□□□□ -0.88
GABPB1-205ENST00000429662 TANGO6Q9C0B7 1094 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 TMEM260Q9NX78 707 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 GOLGA6AQ9NYA3 693 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 AIPL1Q9NZN9 384 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 PCDHA12Q9UN75 941 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 SCAF8Q9UPN6 1271 aaKnown RBP9.55□□□□□ -0.88
GABPB1-205ENST00000429662 MTMR7Q9Y216 660 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 JAG2Q9Y219 1238 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 DAAM1Q9Y4D1 1078 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 TRIM17Q9Y577 477 aa9.55□□□□□ -0.88
GABPB1-205ENST00000429662 CYP3A7-CYP3A51PA0A087WV96 503 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 ZBTB5O15062 677 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 TBX3O15119 743 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 CETN3O15182 167 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 ZNF185O15231 689 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 SLC37A4O43826 429 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 TDP2O95551 362 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 TFRCP02786 760 aaKnown RBP9.54□□□□□ -0.88
GABPB1-205ENST00000429662 HLA-DOAP06340 250 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 CYP3A7P24462 503 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 RPS12P25398 132 aaKnown RBP9.54□□□□□ -0.88
GABPB1-205ENST00000429662 GGCXP38435 758 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 MAGEA9P43362 315 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 TNNI2P48788 182 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 PAK2Q13177 524 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 AP3B2Q13367 1082 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 SLC18A3Q16572 532 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 TDRD12Q587J7 1177 aaKnown RBP9.54□□□□□ -0.88
GABPB1-205ENST00000429662 PPP1R15BQ5SWA1 713 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 FAM83BQ5T0W9 1011 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 KLHDC7AQ5VTJ3 777 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 HGSNATQ68CP4 663 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 DPP8Q6V1X1 898 aaPredicted RBP9.54□□□□□ -0.88
GABPB1-205ENST00000429662 SND1Q7KZF4 910 aaKnown RBP eCLIP9.54□□□□□ -0.88
GABPB1-205ENST00000429662 DYMQ7RTS9 669 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 FRMD5Q7Z6J6 570 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 UBE2Q1Q7Z7E8 422 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 SPATS2Q86XZ4 545 aaKnown RBP9.54□□□□□ -0.88
GABPB1-205ENST00000429662 TRIM59Q8IWR1 403 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 MREGQ8N565 214 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 SUPT20HQ8NEM7 779 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 ERMNQ8TAM6 284 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 MBOAT7Q96N66 472 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 GMLQ99445 158 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 LRRC1Q9BTT6 524 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 COA1Q9GZY4 146 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 UBA5Q9GZZ9 404 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 DBNDD1Q9H9R9 158 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 JMJD4Q9H9V9 463 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 MLXIPQ9HAP2 919 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 PLCB1Q9NQ66 1216 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.54□□□□□ -0.88
GABPB1-205ENST00000429662 CAPN6Q9Y6Q1 641 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 DUSP10Q9Y6W6 482 aa9.54□□□□□ -0.88
GABPB1-205ENST00000429662 DDX60LQ5H9U9 1706 aaKnown RBP9.53□□□□□ -0.88
GABPB1-205ENST00000429662 FRMD3A2A2Y4 597 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 SRRM3A6NNA2 597 aaPredicted RBP9.53□□□□□ -0.88
GABPB1-205ENST00000429662 AGPSO00116 658 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 IGF2BP3O00425 579 aaKnown RBP eCLIP9.53□□□□□ -0.88
GABPB1-205ENST00000429662 CALUO43852 315 aaPredicted RBP9.53□□□□□ -0.88
GABPB1-205ENST00000429662 PHACTR2O75167 634 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 GFPT2O94808 682 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 PLEKP08567 350 aaPredicted RBP9.53□□□□□ -0.88
GABPB1-205ENST00000429662 PLA2G4BP0C869 781 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 NAP1L1P55209 391 aaKnown RBP9.53□□□□□ -0.88
GABPB1-205ENST00000429662 TNNC1P63316 161 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms