RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 TMEM143Q96AN5 459 aa18.52■□□□□ 0.56
SMARCA4-203ENST00000429416 EFCC1Q9HA90 598 aa18.52■□□□□ 0.56
SMARCA4-203ENST00000429416 CASP1P29466 404 aa18.52■□□□□ 0.56
SMARCA4-203ENST00000429416 MMP14P50281 582 aa18.52■□□□□ 0.56
SMARCA4-203ENST00000429416 SLC12A2P55011 1212 aa18.52■□□□□ 0.56
SMARCA4-203ENST00000429416 CUL4BQ13620 913 aa18.52■□□□□ 0.56
SMARCA4-203ENST00000429416 FAM81BQ96LP2 452 aa18.52■□□□□ 0.56
SMARCA4-203ENST00000429416 DGKDQ16760 1214 aa18.52■□□□□ 0.56
SMARCA4-203ENST00000429416 CFAP157Q5JU67 520 aa18.52■□□□□ 0.56
SMARCA4-203ENST00000429416 MANSC4A6NHS7 340 aaPredicted RBP18.52■□□□□ 0.55
SMARCA4-203ENST00000429416 H7C0C1 242 aa18.52■□□□□ 0.55
SMARCA4-203ENST00000429416 ATP5OP48047 213 aa18.52■□□□□ 0.55
SMARCA4-203ENST00000429416 MXRA7P84157 204 aa18.52■□□□□ 0.55
SMARCA4-203ENST00000429416 ZBTB16Q05516 673 aa18.52■□□□□ 0.55
SMARCA4-203ENST00000429416 PTPN21Q16825 1174 aa18.52■□□□□ 0.55
SMARCA4-203ENST00000429416 ZNF699Q32M78 642 aa18.52■□□□□ 0.55
SMARCA4-203ENST00000429416 CPT1AP50416 773 aa18.52■□□□□ 0.55
SMARCA4-203ENST00000429416 JMJD4Q9H9V9 463 aa18.52■□□□□ 0.55
SMARCA4-203ENST00000429416 SLC4A1P02730 911 aa18.51■□□□□ 0.55
SMARCA4-203ENST00000429416 IL1R1P14778 569 aa18.51■□□□□ 0.55
SMARCA4-203ENST00000429416 UNC13DQ70J99 1090 aa18.51■□□□□ 0.55
SMARCA4-203ENST00000429416 CCNYQ8ND76 341 aa18.51■□□□□ 0.55
SMARCA4-203ENST00000429416 CYP2C9P11712 490 aa18.51■□□□□ 0.55
SMARCA4-203ENST00000429416 XKR3Q5GH77 459 aa18.51■□□□□ 0.55
SMARCA4-203ENST00000429416 DNAJC24Q6P3W2 148 aa18.51■□□□□ 0.55
SMARCA4-203ENST00000429416 TRIM17Q9Y577 477 aa18.51■□□□□ 0.55
SMARCA4-203ENST00000429416 ZNF18P17022 549 aa18.51■□□□□ 0.55
SMARCA4-203ENST00000429416 CLUL1Q15846 466 aa18.51■□□□□ 0.55
SMARCA4-203ENST00000429416 CDCA5Q96FF9 252 aa18.51■□□□□ 0.55
SMARCA4-203ENST00000429416 TAAR1Q96RJ0 339 aa18.51■□□□□ 0.55
SMARCA4-203ENST00000429416 RTFDC1Q9BY42 306 aaPredicted RBP18.51■□□□□ 0.55
SMARCA4-203ENST00000429416 RPS6KA5O75582 802 aa18.51■□□□□ 0.55
SMARCA4-203ENST00000429416 CFAP221Q4G0U5 840 aa18.51■□□□□ 0.55
SMARCA4-203ENST00000429416 SAAL1Q96ER3 474 aa18.51■□□□□ 0.55
SMARCA4-203ENST00000429416 KIF12Q96FN5 646 aa18.51■□□□□ 0.55
SMARCA4-203ENST00000429416 MAPK4P31152 587 aa18.5■□□□□ 0.55
SMARCA4-203ENST00000429416 INTS8Q75QN2 995 aaKnown RBP18.5■□□□□ 0.55
SMARCA4-203ENST00000429416 OPA1O60313 960 aa18.5■□□□□ 0.55
SMARCA4-203ENST00000429416 GCLMP48507 274 aa18.5■□□□□ 0.55
SMARCA4-203ENST00000429416 SYT17Q9BSW7 474 aa18.5■□□□□ 0.55
SMARCA4-203ENST00000429416 KIAA1586Q9HCI6 787 aa18.5■□□□□ 0.55
SMARCA4-203ENST00000429416 CEP128Q6ZU80 1094 aa18.5■□□□□ 0.55
SMARCA4-203ENST00000429416 FAM133AQ8N9E0 248 aa18.5■□□□□ 0.55
SMARCA4-203ENST00000429416 IGDCC4Q8TDY8 1250 aa18.5■□□□□ 0.55
SMARCA4-203ENST00000429416 DPF2Q92785 391 aa18.5■□□□□ 0.55
SMARCA4-203ENST00000429416 SLC8A2Q9UPR5 921 aa18.5■□□□□ 0.55
SMARCA4-203ENST00000429416 MAN1A1P33908 653 aa18.5■□□□□ 0.55
SMARCA4-203ENST00000429416 DNAJC21Q5F1R6 531 aaKnown RBP18.5■□□□□ 0.55
SMARCA4-203ENST00000429416 KAZALD1Q96I82 304 aa18.5■□□□□ 0.55
SMARCA4-203ENST00000429416 PXDNLA1KZ92 1463 aa18.5■□□□□ 0.55
SMARCA4-203ENST00000429416 KIAA1210Q9ULL0 1709 aa18.5■□□□□ 0.55
SMARCA4-203ENST00000429416 SARNPP82979 210 aaKnown RBP18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 RINT1Q6NUQ1 792 aa18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 RFX6Q8HWS3 928 aa18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 SKA2Q8WVK7 121 aaPredicted RBP18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 PRIMPOLQ96LW4 560 aa18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 FEZ2Q9UHY8 353 aaPredicted RBP18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 CAPN15O75808 1086 aa18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 ZNF445P59923 1031 aa18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 FNDC3AQ9Y2H6 1198 aaKnown RBP18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 HIP1RO75146 1068 aa18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 VCAM1P19320 739 aa18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 CTAGE3PQ8IX95 158 aa18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 ATXN8OSP0DMR3 200 aa18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 CASP14P31944 242 aa18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 LLGL1Q15334 1064 aa18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 LMCD1Q9NZU5 365 aa18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 ATP2C2O75185 946 aa18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 FAM83AQ86UY5 434 aa18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 GPT2Q8TD30 523 aa18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 VPS33BQ9H267 617 aa18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 TSKSQ9UJT2 592 aa18.49■□□□□ 0.55
SMARCA4-203ENST00000429416 DCDC2CA8MYV0 355 aa18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 PRKCBP05771 671 aa18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 LRRC63Q05C16 580 aa18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 TEX2Q8IWB9 1127 aa18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 BZW2Q9Y6E2 419 aaKnown RBP18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 PPLO60437 1756 aa18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 TBC1D8O95759 1140 aa18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 ARL4AP40617 200 aa18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 CDO1Q16878 200 aa18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 PPP4R3CPQ6ZMV5 832 aa18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 ERAP1Q9NZ08 941 aa18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 RWDD2AQ9UIY3 292 aa18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 ZNF148Q9UQR1 794 aa18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 AFG3L2Q9Y4W6 797 aa18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 NR3C1P04150 777 aa18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 COASYQ13057 564 aa18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 DACT2Q5SW24 774 aa18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 IFT122Q9HBG6 1241 aa18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 SAMSN1Q9NSI8 373 aaKnown RBP18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 DEFB115Q30KQ5 88 aa18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 MROH8Q9H579 483 aa18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 MAGED2Q9UNF1 606 aaPredicted RBP18.48■□□□□ 0.55
SMARCA4-203ENST00000429416 TSTA3Q13630 321 aaPredicted RBP18.47■□□□□ 0.55
SMARCA4-203ENST00000429416 LAMC2Q13753 1193 aa18.47■□□□□ 0.55
SMARCA4-203ENST00000429416 AFG1LQ8WV93 481 aa18.47■□□□□ 0.55
SMARCA4-203ENST00000429416 VPS37BQ9H9H4 285 aa18.47■□□□□ 0.55
SMARCA4-203ENST00000429416 VWDEQ8N2E2 1590 aa18.47■□□□□ 0.55
SMARCA4-203ENST00000429416 CYP27A1Q02318 531 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms