RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ARMC5Q96C12 935 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 ZNF333Q96JL9 665 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 MTG1Q9BT17 334 aaPredicted RBP8.81□□□□□ -1
HMGA1P4-201ENST00000428643 RUSC1Q9BVN2 902 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 KATNAL1Q9BW62 490 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 LRRC27Q9C0I9 530 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 GZF1Q9H116 711 aaPredicted RBP8.81□□□□□ -1
HMGA1P4-201ENST00000428643 BLZF1Q9H2G9 400 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 TUT1Q9H6E5 874 aaKnown RBP8.81□□□□□ -1
HMGA1P4-201ENST00000428643 NRBP2Q9NSY0 501 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 ANKEF1Q9NU02 776 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 KBTBD4Q9NVX7 518 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 TMEM63CQ9P1W3 806 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 DBR1Q9UK59 544 aaKnown RBP8.81□□□□□ -1
HMGA1P4-201ENST00000428643 ZNFX1Q9P2E3 1918 aaKnown RBP8.81□□□□□ -1
HMGA1P4-201ENST00000428643 KBTBD13C9JR72 458 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 HBP1O60381 514 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 STBD1O95210 358 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 SMC2O95347 1197 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 PRR29P0C7W0 189 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 IDEP14735 1019 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 ATP4AP20648 1035 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 CST5P28325 142 aaPredicted RBP8.8□□□□□ -1
HMGA1P4-201ENST00000428643 CASP1P29466 404 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 RARRES1P49788 294 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 PSEN2P49810 448 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 POLGP54098 1239 aaPredicted RBP8.8□□□□□ -1
HMGA1P4-201ENST00000428643 SLC12A3P55017 1021 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 IGBP1P78318 339 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 NKX3-2P78367 333 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 PURAQ00577 322 aaKnown RBP8.8□□□□□ -1
HMGA1P4-201ENST00000428643 LRRC41Q15345 812 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 KCNA10Q16322 511 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 KIAA0753Q2KHM9 967 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 LHX8Q68G74 356 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 DYMQ7RTS9 669 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 SYT2Q8N9I0 419 aaPredicted RBP8.8□□□□□ -1
HMGA1P4-201ENST00000428643 ARRDC4Q8NCT1 418 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 SLC7A3Q8WY07 619 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 BBXQ8WY36 941 aaPredicted RBP8.8□□□□□ -1
HMGA1P4-201ENST00000428643 ERCC4Q92889 916 aaPredicted RBP8.8□□□□□ -1
HMGA1P4-201ENST00000428643 SMARCE1Q969G3 411 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 CCDC47Q96A33 483 aaKnown RBP8.8□□□□□ -1
HMGA1P4-201ENST00000428643 MTRQ99707 1265 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 TRIM9Q9C026 710 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 RNPEPQ9H4A4 650 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 ZHX3Q9H4I2 956 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 ATP6V0A4Q9HBG4 840 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 PAK6Q9NQU5 681 aaPredicted RBP8.8□□□□□ -1
HMGA1P4-201ENST00000428643 CYP26B1Q9NR63 512 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 KIAA1217Q5T5P2 1943 aa8.8□□□□□ -1
HMGA1P4-201ENST00000428643 NPHP3-ACAD11A0A0J9YXS1 232 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 MYMKA6NI61 221 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 MYL1P05976 194 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 ASGR1P07306 291 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 SMIM10L2AP0DMW4 78 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 SMIM10L2BP0DMW5 78 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 XRCC6P12956 609 aaKnown RBP eCLIP8.79□□□□□ -1
HMGA1P4-201ENST00000428643 INSRRP14616 1297 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 CYP11B2P19099 503 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 RFC5P40937 340 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 ACLYP53396 1101 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 TBC1D8BQ0IIM8 1120 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 CUL4BQ13620 913 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 EMC2Q15006 297 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 GRIK4Q16099 956 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 ZSCAN23Q3MJ62 389 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 FAM47CQ5HY64 1035 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 ZNF484Q5JVG2 852 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 FAM102BQ5T8I3 360 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 RINT1Q6NUQ1 792 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 MAEAQ7L5Y9 396 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 SH3RF1Q7Z6J0 888 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 C7orf31Q8N865 590 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 KLHDC9Q8NEP7 349 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 PPP1R13LQ8WUF5 828 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 TRAPPC12Q8WVT3 735 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 DDX12PQ92771 950 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 KAT2BQ92831 832 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 VTI1AQ96AJ9 217 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 REEP2Q9BRK0 252 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 NIFKQ9BYG3 293 aaKnown RBP8.79□□□□□ -1
HMGA1P4-201ENST00000428643 MCOLN1Q9GZU1 580 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 EXOC1Q9NV70 894 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 KCND2Q9NZV8 630 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 PPME1Q9Y570 386 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 DOCK3Q8IZD9 2030 aa8.79□□□□□ -1
HMGA1P4-201ENST00000428643 COL1A2P08123 1366 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 SYCE3A1L190 88 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 MOXD2PA6NHM9 499 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 ZBTB42B2RXF5 422 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 DNM1LO00429 736 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 BIN1O00499 593 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 HIP1RO75146 1068 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 DGAT1O75907 488 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 CABYRO75952 493 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 FAM13AO94988 1023 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 GUCY2CP25092 1073 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 DPYDQ12882 1025 aa8.78□□□□□ -1
HMGA1P4-201ENST00000428643 TARBP2Q15633 366 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms