RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 SCLYQ96I15 445 aa10.3□□□□□ -0.76
SMC1A-203ENST00000428014 AIFM3Q96NN9 605 aa10.3□□□□□ -0.76
SMC1A-203ENST00000428014 BACH2Q9BYV9 841 aa10.3□□□□□ -0.76
SMC1A-203ENST00000428014 IGKV6-21A0A0C4DH24 114 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 ZBTB42B2RXF5 422 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 M0QZ92 97 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 ADAMTS3O15072 1205 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 GJB5O95377 273 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 P4HBP07237 508 aaKnown RBP10.29□□□□□ -0.76
SMC1A-203ENST00000428014 ATP4AP20648 1035 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 THPOP40225 353 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 KCNJ6P48051 423 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 PSMC5P62195 406 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 MBTPS1Q14703 1052 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 PCBP1Q15365 356 aaKnown RBP eCLIP10.29□□□□□ -0.76
SMC1A-203ENST00000428014 EPHA7Q15375 998 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 TARBP2Q15633 366 aaKnown RBP10.29□□□□□ -0.76
SMC1A-203ENST00000428014 INF2Q27J81 1249 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 SWSAP1Q6NVH7 229 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 MTHFD1LQ6UB35 978 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 TSHZ1Q6ZSZ6 1077 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 C4orf19Q8IY42 314 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 DEFB123Q8N688 67 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 NECAB1Q8N987 351 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 WNT8BQ93098 351 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 TIFAQ96CG3 184 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 LRCH3Q96II8 777 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 C8orf76Q96K31 380 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 PBX4Q9BYU1 374 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 SEMA6BQ9H3T3 888 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 CXXC1Q9P0U4 656 aaPredicted RBP10.29□□□□□ -0.76
SMC1A-203ENST00000428014 KCNJ14Q9UNX9 436 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.29□□□□□ -0.76
SMC1A-203ENST00000428014 MICAL3Q7RTP6 2002 aa10.29□□□□□ -0.76
SMC1A-203ENST00000428014 TTC3P53804 2025 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 SCN5AQ14524 2016 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 CARNS1A5YM72 827 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 BTBD18B2RXH4 712 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 TDP2O95551 362 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 C22orf31O95567 290 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 OATP04181 439 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 ACRP10323 421 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 QARSP47897 775 aaKnown RBP10.28□□□□□ -0.76
SMC1A-203ENST00000428014 WDR5P61964 334 aaKnown RBP10.28□□□□□ -0.76
SMC1A-203ENST00000428014 MRPS6P82932 125 aaKnown RBP10.28□□□□□ -0.76
SMC1A-203ENST00000428014 HTRA4P83105 476 aaPredicted RBP10.28□□□□□ -0.76
SMC1A-203ENST00000428014 ZNF200P98182 395 aaPredicted RBP10.28□□□□□ -0.76
SMC1A-203ENST00000428014 POU5F1BQ06416 359 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 SPIRE1Q08AE8 756 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 LETM2Q2VYF4 491 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 FBXO47Q5MNV8 452 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 PIK3AP1Q6ZUJ8 805 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 OTOP2Q7RTS6 562 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 NOSTRINQ8IVI9 506 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 HERC6Q8IVU3 1022 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 FAM184AQ8NB25 1140 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 HAS1Q92839 578 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 TOP1MTQ969P6 601 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 INTS4Q96HW7 963 aaKnown RBP10.28□□□□□ -0.76
SMC1A-203ENST00000428014 SAMD11Q96NU1 681 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 MTMR9Q96QG7 549 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 RAD9AQ99638 391 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 LARP6Q9BRS8 491 aaKnown RBP10.28□□□□□ -0.76
SMC1A-203ENST00000428014 TRAIPQ9BWF2 469 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 IFIH1Q9BYX4 1025 aaKnown RBP10.28□□□□□ -0.76
SMC1A-203ENST00000428014 LMCD1Q9NZU5 365 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 VAV3Q9UKW4 847 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 MYO9BQ13459 2157 aa10.28□□□□□ -0.76
SMC1A-203ENST00000428014 SLC26A4O43511 780 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 ZNF862O60290 1169 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 NEMFO60524 1076 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 CCNT1O60563 726 aaKnown RBP10.27□□□□□ -0.77
SMC1A-203ENST00000428014 JAK2O60674 1132 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 CHRNA1P02708 482 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 AMHP03971 560 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 PDCP20941 246 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 KLRC1P26715 233 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 SP4Q02446 784 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 CUL4AQ13619 759 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 MIER3Q7Z3K6 550 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 KIAA0319LQ8IZA0 1049 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 DBF4BQ8NFT6 615 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 OXER1Q8TDS5 423 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 TMX3Q96JJ7 454 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 CEP89Q96ST8 783 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 HSD17B14Q9BPX1 270 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 TMEM121BQ9BXQ6 578 aaPredicted RBP10.27□□□□□ -0.77
SMC1A-203ENST00000428014 CELF4Q9BZC1 486 aaKnown RBP10.27□□□□□ -0.77
SMC1A-203ENST00000428014 FTOQ9C0B1 505 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMC1A-203ENST00000428014 UNC45AQ9H3U1 944 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 ZNF576Q9H609 170 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 ZSWIM4Q9H7M6 989 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 SLC28A3Q9HAS3 691 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 GABBR1Q9UBS5 961 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 PCDHA12Q9UN75 941 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 RWDD3Q9Y3V2 267 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 TELO2Q9Y4R8 837 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 INSL6Q9Y581 213 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 TRPV2Q9Y5S1 764 aa10.27□□□□□ -0.77
SMC1A-203ENST00000428014 GPR182O15218 404 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms