RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 KLC3Q6P597 504 aa10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 AFAP1L1Q8TED9 768 aa10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 LRGUKQ96M69 825 aa10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 PTPN22Q9Y2R2 807 aa10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 TNS3Q68CZ2 1445 aa10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 UTYO14607 1347 aa10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 ASMTLO95671 621 aa10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 ZBED1O96006 694 aa10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 GSPT1P15170 499 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 CTNNA1P35221 906 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 CDC42EP1Q00587 391 aa10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 DGKHQ86XP1 1220 aa10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 SPATA2LQ8IUW3 424 aaPredicted RBP10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 EDEM3Q9BZQ6 932 aa10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 GMPSP49915 693 aaPredicted RBP10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 ADKP55263 362 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 TTC19Q6DKK2 380 aaPredicted RBP10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 PHLDB2Q86SQ0 1253 aa10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 EFHBQ8N7U6 833 aa10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 GPRC5AQ8NFJ5 357 aa10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 PUS7LQ9H0K6 701 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 SP110Q9HB58 689 aa10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 PIH1D3Q9NQM4 214 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 ZNF212Q9UDV6 495 aa10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 STAP1Q9ULZ2 295 aa10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 ZC3H4Q9UPT8 1303 aaKnown RBP10.69□□□□□ -0.7
CLTCL1-202ENST00000427926 GSTA4O15217 222 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 FKBP3Q00688 224 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 TTC31Q49AM3 519 aaPredicted RBP10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 PPP6R3Q5H9R7 873 aaPredicted RBP10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 STAG1Q8WVM7 1258 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 HSPH1Q92598 858 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 EEF2KMTQ96G04 330 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 USP28Q96RU2 1077 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 TRIM62Q9BVG3 475 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 TJP2Q9UDY2 1190 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 FIS1Q9Y3D6 152 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 SAR1BQ9Y6B6 198 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 DPEP1P16444 411 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 PAPOLAP51003 745 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 ZNF394Q53GI3 561 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 C9orf131Q5VYM1 1079 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 MRPL4Q9BYD3 311 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 KIAA1468Q9P260 1216 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 CDK12Q9NYV4 1490 aaPredicted RBP10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 RPAP1Q9BWH6 1393 aaPredicted RBP10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 PSMA2P25787 234 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 GRIK1P39086 918 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 YWHAHQ04917 246 aaPredicted RBP10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 NSUN2Q08J23 767 aaKnown RBP eCLIP10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 ARHGAP15Q53QZ3 475 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 EXT2Q93063 718 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 DHTKD1Q96HY7 919 aaPredicted RBP10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 TUBGCP2Q9BSJ2 902 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 CLCA2Q9UQC9 943 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 PLA2R1Q13018 1463 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 NDUFAB1O14561 156 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 GNGT2O14610 69 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 PRPF3O43395 683 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 TMCC1O94876 653 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 GH1P01241 217 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 MYL1P05976 194 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 GTF2A2P52657 109 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 KYAT1Q16773 422 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 NAA35Q5VZE5 725 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 PCGF5Q86SE9 256 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 ANKRD13AQ8IZ07 590 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 ZNF280CQ8ND82 737 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 PIGOQ8TEQ8 1089 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 P2RX5Q93086 422 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 HOMER3Q9NSC5 361 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 IQGAP3Q86VI3 1631 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 GUCY2FP51841 1108 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 WASHC5Q12768 1159 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 GTF2H3Q13889 308 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 EZH2Q15910 746 aaKnown RBP10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 THEMIS2Q5TEJ8 643 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 PADI6Q6TGC4 694 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 SH3TC2Q8TF17 1288 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 PCDHB7Q9Y5E2 793 aa10.68□□□□□ -0.7
CLTCL1-202ENST00000427926 CRB1P82279 1406 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 CYP27B1O15528 508 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 HSPA8P11142 646 aaKnown RBP10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 ZNF75DP51815 510 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 TAF11Q15544 211 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 GNASQ5JWF2 1037 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 HP1BP3Q5SSJ5 553 aaPredicted RBP10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 SPATA1Q5VX52 437 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 ZWILCHQ9H900 591 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 EHD2Q9NZN4 543 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 USH1CQ9Y6N9 552 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 A8MXQ7 604 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 F5H6K3 240 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 POC1B-GALNT4F8VUJ3 575 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 KLRC3Q07444 240 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 KIF12Q96FN5 646 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 POLR3FQ9H1D9 316 aaPredicted RBP10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 KLHL8Q9P2G9 620 aaPredicted RBP10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 MAP3K4Q9Y6R4 1608 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms