RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 WHAMMP3Q1A5X7 153 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 TDRD12Q587J7 1177 aaKnown RBP15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 DCAF17Q5H9S7 520 aaPredicted RBP15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 STXBP4Q6ZWJ1 553 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 GPR161Q8N6U8 529 aaKnown RBP15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 RABGGTAQ92696 567 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 METTL14Q9HCE5 456 aaKnown RBP15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 UBE4BO95155 1302 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 MACROD2A1Z1Q3 448 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 HIP1RO75146 1068 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 LCA5LO95447 670 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 TFRCP02786 760 aaKnown RBP15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 CASP4P49662 377 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 HMGCS2P54868 508 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 ODR4Q5SWX8 454 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 ARHGEF16Q5VV41 709 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 TCERG1LQ5VWI1 586 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 KSR1Q8IVT5 923 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 SYN2Q92777 582 aaPredicted RBP15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 PURBQ96QR8 312 aaKnown RBP15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 FIZ1Q96SL8 496 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 RMDN3Q96TC7 470 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 GANQ9H2C0 597 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 IKZF4Q9H2S9 585 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 PXMP2Q9NR77 195 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 RNF146Q9NTX7 359 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 GGA3Q9NZ52 723 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 DUSP10Q9Y6W6 482 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 ZHX2Q9Y6X8 837 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 RLFQ13129 1914 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 SSU72P8A0A1W2PR75 194 aa15.37■□□□□ 0.05
APOBEC3D-202ENST00000427494 ENC1O14682 589 aa15.37■□□□□ 0.05
APOBEC3D-202ENST00000427494 SERPING1P05155 500 aa15.37■□□□□ 0.05
APOBEC3D-202ENST00000427494 RAPGEF1Q13905 1077 aa15.37■□□□□ 0.05
APOBEC3D-202ENST00000427494 SLC9C1Q4G0N8 1177 aa15.37■□□□□ 0.05
APOBEC3D-202ENST00000427494 HGSNATQ68CP4 663 aa15.37■□□□□ 0.05
APOBEC3D-202ENST00000427494 ZNF720Q7Z2F6 126 aa15.37■□□□□ 0.05
APOBEC3D-202ENST00000427494 SECISBP2LQ93073 1101 aaKnown RBP15.37■□□□□ 0.05
APOBEC3D-202ENST00000427494 PDCD2LQ9BRP1 358 aa15.37■□□□□ 0.05
APOBEC3D-202ENST00000427494 TBC1D22BQ9NU19 505 aa15.37■□□□□ 0.05
APOBEC3D-202ENST00000427494 PCDHB13Q9Y5F0 798 aa15.37■□□□□ 0.05
APOBEC3D-202ENST00000427494 TLR2O60603 784 aa15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 ATP1A1P05023 1023 aaKnown RBP15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 CBX1P83916 185 aa15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 ASTE1Q2TB18 679 aaPredicted RBP15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 SNRNP48Q6IEG0 339 aaKnown RBP15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 PADI6Q6TGC4 694 aa15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 TRAPPC11Q7Z392 1133 aa15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 DDX41Q9UJV9 622 aaKnown RBP15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 RIPK3Q9Y572 518 aa15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 TESPA1A2RU30 521 aaPredicted RBP15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 ACTN1P12814 892 aa15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 ZSCAN20P17040 1043 aaPredicted RBP15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 QARSP47897 775 aaKnown RBP15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 GFPT1Q06210 699 aaPredicted RBP15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 MAPK7Q13164 816 aa15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 BAATQ14032 418 aaPredicted RBP15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 NFIL3Q16649 462 aa15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 EXOC3L4Q17RC7 722 aa15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 MAEAQ7L5Y9 396 aa15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 REPS2Q8NFH8 660 aa15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 C12orf42Q96LP6 360 aa15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 ZNF446Q9NWS9 450 aa15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 GPRC5DQ9NZD1 345 aa15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 OGFRQ9NZT2 677 aa15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 HDAC6Q9UBN7 1215 aa15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 TCEAL9Q9UHQ7 104 aa15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 DBR1Q9UK59 544 aaKnown RBP15.36■□□□□ 0.05
APOBEC3D-202ENST00000427494 CTAGE15A4D2H0 777 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 CTAGE8P0CG41 777 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 SLC9A1P19634 815 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 DSG3P32926 999 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 PSMC2P35998 433 aaKnown RBP15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 MAGEA1P43355 309 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 COG2Q14746 738 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 ASIC2Q16515 512 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 HS2ST1Q7LGA3 356 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 CTAGE6Q86UF2 777 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 CTAGE4Q8IX94 777 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 FAM186BQ8IYM0 893 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 SLC35C1Q96A29 364 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 PLCB1Q9NQ66 1216 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 SSC5DA1L4H1 1573 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 C19orf81C9J6K1 198 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 K7ENM7 598 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 PON1P27169 355 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 CCND2P30279 289 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 ARID5AQ03989 594 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 PAPD7Q5XG87 772 aaKnown RBP15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 TMCO3Q6UWJ1 677 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 GBP6Q6ZN66 633 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 DAW1Q8N136 415 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 FAM133AQ8N9E0 248 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 KLRG1Q96E93 195 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 CCDC43Q96MW1 224 aaKnown RBP15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 GBP3Q9H0R5 595 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 MLXIPQ9HAP2 919 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 SAR1BQ9Y6B6 198 aa15.35■□□□□ 0.05
APOBEC3D-202ENST00000427494 DICER1Q9UPY3 1922 aaKnown RBP15.34■□□□□ 0.05
APOBEC3D-202ENST00000427494 ANO9A1A5B4 782 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms