RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 PITPNM1O00562 1244 aa14.04□□□□□ -0.16
SMIM12-203ENST00000426886 RSPH10BP0C881 870 aa14.04□□□□□ -0.16
SMIM12-203ENST00000426886 SELPP16109 830 aa14.04□□□□□ -0.16
SMIM12-203ENST00000426886 MARCKSP29966 332 aaPredicted RBP14.04□□□□□ -0.16
SMIM12-203ENST00000426886 TRIM71Q2Q1W2 868 aaKnown RBP14.04□□□□□ -0.16
SMIM12-203ENST00000426886 ZNF484Q5JVG2 852 aa14.04□□□□□ -0.16
SMIM12-203ENST00000426886 C16orf59Q7L2K0 433 aa14.04□□□□□ -0.16
SMIM12-203ENST00000426886 OTOP2Q7RTS6 562 aa14.04□□□□□ -0.16
SMIM12-203ENST00000426886 CCDC155Q8N6L0 562 aa14.04□□□□□ -0.16
SMIM12-203ENST00000426886 HSD17B14Q9BPX1 270 aa14.04□□□□□ -0.16
SMIM12-203ENST00000426886 ZSWIM4Q9H7M6 989 aa14.04□□□□□ -0.16
SMIM12-203ENST00000426886 MBLAC1A4D2B0 266 aaPredicted RBP14.04□□□□□ -0.16
SMIM12-203ENST00000426886 MED24O75448 989 aa14.04□□□□□ -0.16
SMIM12-203ENST00000426886 STBD1O95210 358 aa14.04□□□□□ -0.16
SMIM12-203ENST00000426886 ZSCAN22P10073 491 aaPredicted RBP14.04□□□□□ -0.16
SMIM12-203ENST00000426886 YWHABP31946 246 aaKnown RBP14.04□□□□□ -0.16
SMIM12-203ENST00000426886 CLCN3P51790 818 aa14.04□□□□□ -0.16
SMIM12-203ENST00000426886 ATP2C1P98194 919 aaPredicted RBP14.04□□□□□ -0.16
SMIM12-203ENST00000426886 SHHQ15465 462 aa14.04□□□□□ -0.16
SMIM12-203ENST00000426886 ZNF365Q70YC5 407 aa14.04□□□□□ -0.16
SMIM12-203ENST00000426886 CATSPER3Q86XQ3 398 aa14.04□□□□□ -0.16
SMIM12-203ENST00000426886 KAT6AQ92794 2004 aa14.04□□□□□ -0.16
SMIM12-203ENST00000426886 CEP170P1Q96L14 293 aa14.04□□□□□ -0.16
SMIM12-203ENST00000426886 ZSCAN16Q9H4T2 348 aaPredicted RBP14.04□□□□□ -0.16
SMIM12-203ENST00000426886 TBC1D8BQ0IIM8 1120 aa14.03□□□□□ -0.16
SMIM12-203ENST00000426886 EFCAB12Q6NXP0 572 aa14.03□□□□□ -0.16
SMIM12-203ENST00000426886 TAF2Q6P1X5 1199 aa14.03□□□□□ -0.16
SMIM12-203ENST00000426886 USP28Q96RU2 1077 aa14.03□□□□□ -0.16
SMIM12-203ENST00000426886 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.03□□□□□ -0.16
SMIM12-203ENST00000426886 CEP131Q9UPN4 1083 aa14.03□□□□□ -0.16
SMIM12-203ENST00000426886 C22orf31O95567 290 aa14.03□□□□□ -0.16
SMIM12-203ENST00000426886 SPATA31C1P0DKV0 1188 aa14.03□□□□□ -0.16
SMIM12-203ENST00000426886 CCT6AP40227 531 aaKnown RBP14.03□□□□□ -0.16
SMIM12-203ENST00000426886 GRIN1Q05586 938 aa14.03□□□□□ -0.16
SMIM12-203ENST00000426886 PPIGQ13427 754 aaKnown RBP eCLIP14.03□□□□□ -0.16
SMIM12-203ENST00000426886 XKR9Q5GH70 373 aa14.03□□□□□ -0.16
SMIM12-203ENST00000426886 POTEGQ6S5H5 508 aa14.03□□□□□ -0.16
SMIM12-203ENST00000426886 CHAMP1Q96JM3 812 aa14.03□□□□□ -0.16
SMIM12-203ENST00000426886 PLIN2Q99541 437 aa14.03□□□□□ -0.16
SMIM12-203ENST00000426886 PCDHA2Q9Y5H9 948 aa14.03□□□□□ -0.16
SMIM12-203ENST00000426886 LAD1O00515 517 aa14.02□□□□□ -0.16
SMIM12-203ENST00000426886 NBNO60934 754 aa14.02□□□□□ -0.16
SMIM12-203ENST00000426886 VTNP04004 478 aa14.02□□□□□ -0.16
SMIM12-203ENST00000426886 FXR2P51116 673 aaKnown RBP eCLIP14.02□□□□□ -0.16
SMIM12-203ENST00000426886 MBTPS1Q14703 1052 aa14.02□□□□□ -0.16
SMIM12-203ENST00000426886 ECM1Q16610 540 aa14.02□□□□□ -0.16
SMIM12-203ENST00000426886 GLIPR1L2Q4G1C9 344 aa14.02□□□□□ -0.16
SMIM12-203ENST00000426886 RSPH3Q86UC2 560 aa14.02□□□□□ -0.16
SMIM12-203ENST00000426886 C4orf19Q8IY42 314 aa14.02□□□□□ -0.16
SMIM12-203ENST00000426886 ERMNQ8TAM6 284 aa14.02□□□□□ -0.16
SMIM12-203ENST00000426886 SNX29Q8TEQ0 813 aa14.02□□□□□ -0.16
SMIM12-203ENST00000426886 MYH9P35579 1960 aaKnown RBP14.02□□□□□ -0.17
SMIM12-203ENST00000426886 F13A1P00488 732 aa14.02□□□□□ -0.17
SMIM12-203ENST00000426886 CHRNA1P02708 482 aa14.02□□□□□ -0.17
SMIM12-203ENST00000426886 DRP2Q13474 957 aa14.02□□□□□ -0.17
SMIM12-203ENST00000426886 GPNMBQ14956 572 aa14.02□□□□□ -0.17
SMIM12-203ENST00000426886 SPECC1Q5M775 1068 aa14.02□□□□□ -0.17
SMIM12-203ENST00000426886 TRAF7Q6Q0C0 670 aa14.02□□□□□ -0.17
SMIM12-203ENST00000426886 KIAA0319LQ8IZA0 1049 aa14.02□□□□□ -0.17
SMIM12-203ENST00000426886 RAB34Q9BZG1 259 aa14.02□□□□□ -0.17
SMIM12-203ENST00000426886 IL23AQ9NPF7 189 aa14.02□□□□□ -0.17
SMIM12-203ENST00000426886 CYP26B1Q9NR63 512 aa14.02□□□□□ -0.17
SMIM12-203ENST00000426886 AKT3Q9Y243 479 aa14.02□□□□□ -0.17
SMIM12-203ENST00000426886 DKC1O60832 514 aaKnown RBP eCLIP14.01□□□□□ -0.17
SMIM12-203ENST00000426886 MAEAQ7L5Y9 396 aa14.01□□□□□ -0.17
SMIM12-203ENST00000426886 OTUD6AQ7L8S5 288 aa14.01□□□□□ -0.17
SMIM12-203ENST00000426886 IGSF22Q8N9C0 903 aa14.01□□□□□ -0.17
SMIM12-203ENST00000426886 VWCEQ96DN2 955 aa14.01□□□□□ -0.17
SMIM12-203ENST00000426886 CCDC43Q96MW1 224 aaKnown RBP14.01□□□□□ -0.17
SMIM12-203ENST00000426886 NIFKQ9BYG3 293 aaKnown RBP14.01□□□□□ -0.17
SMIM12-203ENST00000426886 KIAA1024Q9UPX6 916 aa14.01□□□□□ -0.17
SMIM12-203ENST00000426886 CDY2AQ9Y6F7 541 aa14.01□□□□□ -0.17
SMIM12-203ENST00000426886 ZBBXA8MT70 800 aa14.01□□□□□ -0.17
SMIM12-203ENST00000426886 PRPHP41219 470 aa14.01□□□□□ -0.17
SMIM12-203ENST00000426886 PDIA5Q14554 519 aa14.01□□□□□ -0.17
SMIM12-203ENST00000426886 TARBP2Q15633 366 aaKnown RBP14.01□□□□□ -0.17
SMIM12-203ENST00000426886 KIZQ2M2Z5 673 aa14.01□□□□□ -0.17
SMIM12-203ENST00000426886 TMEM240Q5SV17 173 aa14.01□□□□□ -0.17
SMIM12-203ENST00000426886 RPUSD2Q8IZ73 545 aaKnown RBP14.01□□□□□ -0.17
SMIM12-203ENST00000426886 TDHQ8IZJ6 230 aa14.01□□□□□ -0.17
SMIM12-203ENST00000426886 PRO3102Q9H379 93 aa14.01□□□□□ -0.17
SMIM12-203ENST00000426886 CDHR5Q9HBB8 845 aa14.01□□□□□ -0.17
SMIM12-203ENST00000426886 COL1A2P08123 1366 aa14.01□□□□□ -0.17
SMIM12-203ENST00000426886 SMIM35A0A1B0GVV1 85 aa14□□□□□ -0.17
SMIM12-203ENST00000426886 FGBP02675 491 aa14□□□□□ -0.17
SMIM12-203ENST00000426886 GHRP10912 638 aa14□□□□□ -0.17
SMIM12-203ENST00000426886 KRT79Q5XKE5 535 aa14□□□□□ -0.17
SMIM12-203ENST00000426886 RNPC3Q96LT9 517 aaKnown RBP14□□□□□ -0.17
SMIM12-203ENST00000426886 ZDHHC9Q9Y397 364 aa14□□□□□ -0.17
SMIM12-203ENST00000426886 MAGEB2O15479 319 aa14□□□□□ -0.17
SMIM12-203ENST00000426886 RPA1P27694 616 aa14□□□□□ -0.17
SMIM12-203ENST00000426886 BMP8BP34820 402 aa14□□□□□ -0.17
SMIM12-203ENST00000426886 POLGP54098 1239 aaPredicted RBP14□□□□□ -0.17
SMIM12-203ENST00000426886 PTPAQ15257 358 aa14□□□□□ -0.17
SMIM12-203ENST00000426886 HAUS3Q68CZ6 603 aa14□□□□□ -0.17
SMIM12-203ENST00000426886 TMEM143Q96AN5 459 aa14□□□□□ -0.17
SMIM12-203ENST00000426886 CLIC6Q96NY7 704 aa14□□□□□ -0.17
SMIM12-203ENST00000426886 POLD4Q9HCU8 107 aa14□□□□□ -0.17
SMIM12-203ENST00000426886 DDX19AQ9NUU7 478 aaKnown RBP14□□□□□ -0.17
SMIM12-203ENST00000426886 CXXC1Q9P0U4 656 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms