RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 GRIN1Q05586 938 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 SPIRE1Q08AE8 756 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 LAMC2Q13753 1193 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 NEDD9Q14511 834 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 PTPAQ15257 358 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 SF3A1Q15459 793 aaKnown RBP6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 CALCRLQ16602 461 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 FSCN1Q16658 493 aaKnown RBP6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 RILPL1Q5EBL4 403 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 GNASQ5JWF2 1037 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 LRCH2Q5VUJ6 765 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 METTL7BQ6UX53 244 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 B3GNT9Q6UX72 402 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 TRIM50Q86XT4 487 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 PPTC7Q8NI37 304 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 KAT2BQ92831 832 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 FERMT2Q96AC1 680 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 CDHR1Q96JP9 859 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 PCYT2Q99447 389 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 NAP1L4Q99733 375 aaKnown RBP6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 SDF4Q9BRK5 362 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 KLF16Q9BXK1 252 aaPredicted RBP6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 AP5M1Q9H0R1 490 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 ZSCAN16Q9H4T2 348 aaPredicted RBP6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 MLXIPQ9HAP2 919 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 JPH1Q9HDC5 661 aaPredicted RBP6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 SLC9A2Q9UBY0 812 aa6.45□□□□□ -1.38
HERPUD2-204ENST00000426180 MYH7BA7E2Y1 1941 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 A0A087WWV3 80 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 SOBPA7XYQ1 873 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 PP2D1A8MPX8 630 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 TBX3O15119 743 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 MSCO60682 206 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 ATG7O95352 703 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 ASGR1P07306 291 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 OR52Z1P0C646 297 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 HOXD8P13378 290 aaPredicted RBP6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 CST5P28325 142 aaPredicted RBP6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 MARCKSP29966 332 aaPredicted RBP6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 TECP42680 631 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 NASPP49321 788 aaPredicted RBP6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 ACLYP53396 1101 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 PSMC6P62333 389 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 ATP2C1P98194 919 aaPredicted RBP6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 AMHR2Q16671 573 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 UGCGQ16739 394 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 UTP14CQ5TAP6 766 aaKnown RBP6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 NCAPH2Q6IBW4 605 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 CXCL17Q6UXB2 119 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 ABHD15Q6UXT9 468 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 FOXJ1Q92949 421 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 FAM20AQ96MK3 541 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 CDK15Q96Q40 435 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 RIT2Q99578 217 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 C16orf70Q9BSU1 422 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 TEKT3Q9BXF9 490 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 TBC1D22BQ9NU19 505 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 PHF24Q9UPV7 400 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 GRIN2DO15399 1336 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 ELP1O95163 1332 aa6.44□□□□□ -1.38
HERPUD2-204ENST00000426180 IGKV6D-21A0A0A0MT36 114 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 A0A1W2PQ45 241 aaPredicted RBP6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 A0A1W2PQY0 241 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 ZNF862O60290 1169 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 MARCH6O60337 910 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 MAN1A2O60476 641 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 LGR5O75473 907 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 ZIC2O95409 532 aaPredicted RBP6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 BAG4O95429 457 aaKnown RBP6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 LGALS2P05162 132 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 SUPT20HL2P0C7V6 817 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 COL6A1P12109 1028 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 ATP4AP20648 1035 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 CDC25AP30304 524 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 TCF7P36402 384 aaPredicted RBP6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 CPT1AP50416 773 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 CHMP4BP1P59074 171 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 NUCB2P80303 420 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 PURAQ00577 322 aaKnown RBP6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 KRT76Q01546 638 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 PPP2R5CQ13362 524 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 ORC2Q13416 577 aaPredicted RBP6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 SLC39A14Q15043 492 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 ECM1Q16610 540 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 ZNF746Q6NUN9 644 aaPredicted RBP6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 SWSAP1Q6NVH7 229 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 USP49Q70CQ1 688 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 MIER3Q7Z3K6 550 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 UBE2Q1Q7Z7E8 422 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 RNF180Q86T96 592 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 CCDC60Q8IWA6 550 aaPredicted RBP6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 LINC00301Q8NCQ3 95 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 ARRDC4Q8NCT1 418 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 GIMAP8Q8ND71 665 aaPredicted RBP6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 BANK1Q8NDB2 785 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 SEPT1Q8WYJ6 367 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 DYDC2Q96IM9 177 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 PAWRQ96IZ0 340 aaKnown RBP6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 CLIC6Q96NY7 704 aa6.43□□□□□ -1.38
HERPUD2-204ENST00000426180 TSEN34Q9BSV6 310 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms