RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 PAK2Q13177 524 aa17.08■□□□□ 0.32
ATG4B-209ENST00000425239 PAN2Q504Q3 1202 aaKnown RBP17.08■□□□□ 0.32
ATG4B-209ENST00000425239 FAM43BQ6ZT52 329 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-209ENST00000425239 DHX32Q7L7V1 743 aaKnown RBP17.08■□□□□ 0.32
ATG4B-209ENST00000425239 SKAP1Q86WV1 359 aa17.08■□□□□ 0.32
ATG4B-209ENST00000425239 EFHBQ8N7U6 833 aa17.08■□□□□ 0.32
ATG4B-209ENST00000425239 ATP8B4Q8TF62 1192 aa17.08■□□□□ 0.32
ATG4B-209ENST00000425239 POF1BQ8WVV4 589 aa17.08■□□□□ 0.32
ATG4B-209ENST00000425239 RGS18Q9NS28 235 aa17.08■□□□□ 0.32
ATG4B-209ENST00000425239 CD207Q9UJ71 328 aa17.08■□□□□ 0.32
ATG4B-209ENST00000425239 PCDHGC5Q9Y5F6 944 aa17.08■□□□□ 0.32
ATG4B-209ENST00000425239 C9IYK1 514 aa17.07■□□□□ 0.32
ATG4B-209ENST00000425239 hCG_1984214I3L0E3 225 aa17.07■□□□□ 0.32
ATG4B-209ENST00000425239 HBP1O60381 514 aa17.07■□□□□ 0.32
ATG4B-209ENST00000425239 STAG3L1P0CL83 205 aa17.07■□□□□ 0.32
ATG4B-209ENST00000425239 SARSP49591 514 aaKnown RBP17.07■□□□□ 0.32
ATG4B-209ENST00000425239 ADCY7P51828 1080 aa17.07■□□□□ 0.32
ATG4B-209ENST00000425239 COASYQ13057 564 aa17.07■□□□□ 0.32
ATG4B-209ENST00000425239 AP3B2Q13367 1082 aa17.07■□□□□ 0.32
ATG4B-209ENST00000425239 RTN1Q16799 776 aa17.07■□□□□ 0.32
ATG4B-209ENST00000425239 FAM102BQ5T8I3 360 aa17.07■□□□□ 0.32
ATG4B-209ENST00000425239 HFE2Q6ZVN8 426 aa17.07■□□□□ 0.32
ATG4B-209ENST00000425239 RNF135Q8IUD6 432 aa17.07■□□□□ 0.32
ATG4B-209ENST00000425239 ZNF713Q8N859 430 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-209ENST00000425239 SMRP1Q8NCR6 262 aa17.07■□□□□ 0.32
ATG4B-209ENST00000425239 MUTYHQ9UIF7 546 aa17.07■□□□□ 0.32
ATG4B-209ENST00000425239 MAFBQ9Y5Q3 323 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-209ENST00000425239 ZBTB43O43298 467 aa17.06■□□□□ 0.32
ATG4B-209ENST00000425239 GPR32O75388 356 aa17.06■□□□□ 0.32
ATG4B-209ENST00000425239 ADD1P35611 737 aaKnown RBP17.06■□□□□ 0.32
ATG4B-209ENST00000425239 NFX1Q12986 1120 aaKnown RBP17.06■□□□□ 0.32
ATG4B-209ENST00000425239 KCNC3Q14003 757 aa17.06■□□□□ 0.32
ATG4B-209ENST00000425239 PKN1Q16512 942 aa17.06■□□□□ 0.32
ATG4B-209ENST00000425239 BMP2KLQ5H9B9 411 aa17.06■□□□□ 0.32
ATG4B-209ENST00000425239 SWSAP1Q6NVH7 229 aa17.06■□□□□ 0.32
ATG4B-209ENST00000425239 SYNE3Q6ZMZ3 975 aa17.06■□□□□ 0.32
ATG4B-209ENST00000425239 VN1R2Q8NFZ6 395 aa17.06■□□□□ 0.32
ATG4B-209ENST00000425239 UPF3BQ9BZI7 483 aaKnown RBP17.06■□□□□ 0.32
ATG4B-209ENST00000425239 HCSTQ9UBK5 93 aa17.06■□□□□ 0.32
ATG4B-209ENST00000425239 ST3GAL5Q9UNP4 418 aa17.06■□□□□ 0.32
ATG4B-209ENST00000425239 COL1A2P08123 1366 aa17.05■□□□□ 0.32
ATG4B-209ENST00000425239 LOC730098B7Z3J9 87 aa17.05■□□□□ 0.32
ATG4B-209ENST00000425239 M0QZ92 97 aa17.05■□□□□ 0.32
ATG4B-209ENST00000425239 DDX39AO00148 427 aaKnown RBP17.05■□□□□ 0.32
ATG4B-209ENST00000425239 RPS6KA5O75582 802 aa17.05■□□□□ 0.32
ATG4B-209ENST00000425239 CSPG5O95196 566 aa17.05■□□□□ 0.32
ATG4B-209ENST00000425239 C22orf31O95567 290 aa17.05■□□□□ 0.32
ATG4B-209ENST00000425239 NRIP1P48552 1158 aa17.05■□□□□ 0.32
ATG4B-209ENST00000425239 RCAN1P53805 252 aa17.05■□□□□ 0.32
ATG4B-209ENST00000425239 ERVFC1P60507 584 aa17.05■□□□□ 0.32
ATG4B-209ENST00000425239 DSC3Q14574 896 aa17.05■□□□□ 0.32
ATG4B-209ENST00000425239 CBX2Q14781 532 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-209ENST00000425239 PFKFB3Q16875 520 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-209ENST00000425239 ZNF484Q5JVG2 852 aa17.05■□□□□ 0.32
ATG4B-209ENST00000425239 SLC24A5Q71RS6 500 aa17.05■□□□□ 0.32
ATG4B-209ENST00000425239 LINC01465Q8N7H1 131 aa17.05■□□□□ 0.32
ATG4B-209ENST00000425239 FBXL18Q96ME1 805 aa17.05■□□□□ 0.32
ATG4B-209ENST00000425239 ADAM2Q99965 735 aa17.05■□□□□ 0.32
ATG4B-209ENST00000425239 ZMYND12Q9H0C1 365 aa17.05■□□□□ 0.32
ATG4B-209ENST00000425239 CWH43Q9H720 699 aa17.05■□□□□ 0.32
ATG4B-209ENST00000425239 ZNF302Q9NR11 478 aa17.05■□□□□ 0.32
ATG4B-209ENST00000425239 WDR81Q562E7 1941 aa17.04■□□□□ 0.32
ATG4B-209ENST00000425239 IPO5O00410 1097 aaKnown RBP17.04■□□□□ 0.32
ATG4B-209ENST00000425239 RBM10P98175 930 aaKnown RBP17.04■□□□□ 0.32
ATG4B-209ENST00000425239 JAKMIP3Q5VZ66 844 aa17.04■□□□□ 0.32
ATG4B-209ENST00000425239 RBM23Q86U06 439 aaKnown RBP17.04■□□□□ 0.32
ATG4B-209ENST00000425239 ALYREFQ86V81 257 aaKnown RBP17.04■□□□□ 0.32
ATG4B-209ENST00000425239 FAM228AQ86W67 206 aa17.04■□□□□ 0.32
ATG4B-209ENST00000425239 PLA2G4DQ86XP0 818 aa17.04■□□□□ 0.32
ATG4B-209ENST00000425239 EDAQ92838 391 aa17.04■□□□□ 0.32
ATG4B-209ENST00000425239 KCNB2Q92953 911 aa17.04■□□□□ 0.32
ATG4B-209ENST00000425239 LENG9Q96B70 501 aa17.04■□□□□ 0.32
ATG4B-209ENST00000425239 UIMC1Q96RL1 719 aa17.04■□□□□ 0.32
ATG4B-209ENST00000425239 POP1Q99575 1024 aaKnown RBP17.04■□□□□ 0.32
ATG4B-209ENST00000425239 GLT8D2Q9H1C3 349 aa17.04■□□□□ 0.32
ATG4B-209ENST00000425239 KCNH6Q9H252 994 aa17.04■□□□□ 0.32
ATG4B-209ENST00000425239 RNF19AQ9NV58 838 aa17.04■□□□□ 0.32
ATG4B-209ENST00000425239 TYW1Q9NV66 732 aaKnown RBP17.04■□□□□ 0.32
ATG4B-209ENST00000425239 PCDHB7Q9Y5E2 793 aa17.04■□□□□ 0.32
ATG4B-209ENST00000425239 KLF18A0A0U1RQI7 1052 aa17.03■□□□□ 0.32
ATG4B-209ENST00000425239 ESYT2A0FGR8 921 aa17.03■□□□□ 0.32
ATG4B-209ENST00000425239 FSCN2O14926 492 aa17.03■□□□□ 0.32
ATG4B-209ENST00000425239 PPFIA3O75145 1194 aa17.03■□□□□ 0.32
ATG4B-209ENST00000425239 NDUFV1P49821 464 aa17.03■□□□□ 0.32
ATG4B-209ENST00000425239 CRYBB1P53674 252 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-209ENST00000425239 NHLH1Q02575 133 aa17.03■□□□□ 0.32
ATG4B-209ENST00000425239 UBE3AQ05086 875 aa17.03■□□□□ 0.32
ATG4B-209ENST00000425239 CSPP1Q1MSJ5 1256 aa17.03■□□□□ 0.32
ATG4B-209ENST00000425239 RNF20Q5VTR2 975 aa17.03■□□□□ 0.32
ATG4B-209ENST00000425239 FAM160B1Q5W0V3 765 aa17.03■□□□□ 0.32
ATG4B-209ENST00000425239 PDXDC2PQ6P474 469 aa17.03■□□□□ 0.32
ATG4B-209ENST00000425239 LRRC55Q6ZSA7 311 aa17.03■□□□□ 0.32
ATG4B-209ENST00000425239 BMP8AQ7Z5Y6 402 aa17.03■□□□□ 0.32
ATG4B-209ENST00000425239 C1orf112Q9NSG2 853 aa17.03■□□□□ 0.32
ATG4B-209ENST00000425239 BARX2Q9UMQ3 279 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-209ENST00000425239 MYH9P35579 1960 aaKnown RBP17.02■□□□□ 0.32
ATG4B-209ENST00000425239 GOLGA8AA7E2F4 631 aa17.02■□□□□ 0.32
ATG4B-209ENST00000425239 GOLGA8BA8MQT2 603 aa17.02■□□□□ 0.32
ATG4B-209ENST00000425239 BACH1O14867 736 aa17.02■□□□□ 0.32
ATG4B-209ENST00000425239 PER2O15055 1255 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms