RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 GJC2Q5T442 439 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-205ENST00000424674 GPR158Q5T848 1215 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 EEF1DP3Q658K8 133 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 LVRNQ6Q4G3 990 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 C6orf15Q6UXA7 325 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-205ENST00000424674 FAM186BQ8IYM0 893 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 NKAPQ8N5F7 415 aaKnown RBP4.4□□□□□ -1.71
SF3B1-205ENST00000424674 SPATA5Q8NB90 893 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 NAXEQ8NCW5 288 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 GIMAP8Q8ND71 665 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-205ENST00000424674 ACRBPQ8NEB7 543 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 LEO1Q8WVC0 666 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-205ENST00000424674 TRIM63Q969Q1 353 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 PAWRQ96IZ0 340 aaKnown RBP4.4□□□□□ -1.71
SF3B1-205ENST00000424674 PWWP2AQ96N64 755 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 CCDC8Q9H0W5 538 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-205ENST00000424674 EPN3Q9H201 632 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 TCF7L1Q9HCS4 588 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 RTEL1Q9NZ71 1219 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 CGGBP1Q9UFW8 167 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-205ENST00000424674 ABCF2Q9UG63 623 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 IP6K2Q9UHH9 426 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 ISY1Q9ULR0 285 aaKnown RBP4.4□□□□□ -1.71
SF3B1-205ENST00000424674 DMTF1Q9Y222 760 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 TTLL3Q9Y4R7 772 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 IRS2Q9Y4H2 1338 aa4.4□□□□□ -1.71
SF3B1-205ENST00000424674 F5H423 210 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-205ENST00000424674 K7ENM7 598 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 PMM2O15305 246 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 PPM1BO75688 479 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 MTA2O94776 668 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 SNUPNO95149 360 aaKnown RBP4.39□□□□□ -1.71
SF3B1-205ENST00000424674 TGFB3P10600 412 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 TNFAIP3P21580 790 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 SCP2P22307 547 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 FBLN1P23142 703 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 CYP2C19P33261 490 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 BUD31P41223 144 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-205ENST00000424674 LIMS1P48059 325 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 AK2P54819 239 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 AMPD2Q01433 879 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 GRB10Q13322 594 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 GTF2H3Q13889 308 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 TARBP2Q15633 366 aaKnown RBP4.39□□□□□ -1.71
SF3B1-205ENST00000424674 SPECC1Q5M775 1068 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 VHLLQ6RSH7 139 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 CABP7Q86V35 215 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 NDUFAF2Q8N183 169 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 CNTD1Q8N815 330 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 LINC01356Q8N9X3 169 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 IL17REQ8NFR9 667 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 NLGN2Q8NFZ4 835 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 FRS2Q8WU20 508 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 DDX1Q92499 740 aaKnown RBP4.39□□□□□ -1.71
SF3B1-205ENST00000424674 PPP1R14AQ96A00 147 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 CLIP3Q96DZ5 547 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 PPM1MQ96MI6 270 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 IPO9Q96P70 1041 aaKnown RBP4.39□□□□□ -1.71
SF3B1-205ENST00000424674 MYCBPQ99417 103 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-205ENST00000424674 MYD88Q99836 296 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 MCMBPQ9BTE3 642 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 MRPL4Q9BYD3 311 aaKnown RBP4.39□□□□□ -1.71
SF3B1-205ENST00000424674 XYLT2Q9H1B5 865 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 DDX21Q9NR30 783 aaKnown RBP eCLIP4.39□□□□□ -1.71
SF3B1-205ENST00000424674 DBR1Q9UK59 544 aaKnown RBP4.39□□□□□ -1.71
SF3B1-205ENST00000424674 ODF2LQ9ULJ1 636 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 APOBEC2Q9Y235 224 aaKnown RBP4.39□□□□□ -1.71
SF3B1-205ENST00000424674 FAM50BQ9Y247 325 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 ANKRD6Q9Y2G4 727 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 BACE2Q9Y5Z0 518 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 FRMPD2Q68DX3 1309 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-205ENST00000424674 ITIH6Q6UXX5 1313 aa4.39□□□□□ -1.71
SF3B1-205ENST00000424674 OTOL1A6NHN0 477 aaPredicted RBP4.38□□□□□ -1.71
SF3B1-205ENST00000424674 F8W031 263 aaPredicted RBP4.38□□□□□ -1.71
SF3B1-205ENST00000424674 hCG_1984214I3L0E3 225 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 J3KRW8 73 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 ADCY3O60266 1144 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 HSD3B1P14060 373 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 VCAM1P19320 739 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 RXRGP48443 463 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 CLK1P49759 484 aaKnown RBP4.38□□□□□ -1.71
SF3B1-205ENST00000424674 SEPHS1P49903 392 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 CAP1Q01518 475 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 ADCY1Q08828 1119 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 PRKG2Q13237 762 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 GRM3Q14832 879 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 NCAPHQ15003 741 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 SEPT2Q15019 361 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 RGL3Q3MIN7 710 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 ARHGAP29Q52LW3 1261 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 TMEM240Q5SV17 173 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 SRLQ86TD4 932 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 TPH2Q8IWU9 490 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 OR8H2Q8N162 312 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 FEZF2Q8TBJ5 459 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 KISS1RQ969F8 398 aaPredicted RBP4.38□□□□□ -1.71
SF3B1-205ENST00000424674 CDHR1Q96JP9 859 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 TTC1Q99614 292 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 MENTQ9BUN1 341 aa4.38□□□□□ -1.71
SF3B1-205ENST00000424674 SEZ6LQ9BYH1 1024 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms