RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 RPA1P27694 616 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 SEC24CP53992 1094 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 PDE4CQ08493 712 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 BYSLQ13895 437 aaKnown RBP16.59■□□□□ 0.25
C9orf3-204ENST00000424143 GIT2Q14161 759 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 TRADDQ15628 312 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 Q4G0T1 1027 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 HOOK3Q86VS8 718 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 CCDC13Q8IYE1 715 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 FGFBP2Q9BYJ0 223 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 CARD9Q9H257 536 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 UTP11Q9Y3A2 253 aaKnown RBP16.59■□□□□ 0.25
C9orf3-204ENST00000424143 UBE4BO95155 1302 aa16.58■□□□□ 0.24
C9orf3-204ENST00000424143 F8VZ95 297 aa16.58■□□□□ 0.24
C9orf3-204ENST00000424143 PPP1R11O60927 126 aaPredicted RBP16.58■□□□□ 0.24
C9orf3-204ENST00000424143 STAT1P42224 750 aa16.58■□□□□ 0.24
C9orf3-204ENST00000424143 PTENP60484 403 aa16.58■□□□□ 0.24
C9orf3-204ENST00000424143 PPATQ06203 517 aa16.58■□□□□ 0.24
C9orf3-204ENST00000424143 IFT88Q13099 833 aa16.58■□□□□ 0.24
C9orf3-204ENST00000424143 DHX34Q14147 1143 aaKnown RBP16.58■□□□□ 0.24
C9orf3-204ENST00000424143 PREPLQ4J6C6 727 aaPredicted RBP16.58■□□□□ 0.24
C9orf3-204ENST00000424143 WLSQ5T9L3 541 aa16.58■□□□□ 0.24
C9orf3-204ENST00000424143 PGM2Q96G03 612 aa16.58■□□□□ 0.24
C9orf3-204ENST00000424143 BORCS6Q96GS4 357 aa16.58■□□□□ 0.24
C9orf3-204ENST00000424143 SEC16BQ96JE7 1060 aa16.58■□□□□ 0.24
C9orf3-204ENST00000424143 FAM20AQ96MK3 541 aa16.58■□□□□ 0.24
C9orf3-204ENST00000424143 DNAJC5Q9H3Z4 198 aa16.58■□□□□ 0.24
C9orf3-204ENST00000424143 CCDC134Q9H6E4 229 aa16.58■□□□□ 0.24
C9orf3-204ENST00000424143 CNOT7Q9UIV1 285 aaKnown RBP16.58■□□□□ 0.24
C9orf3-204ENST00000424143 PACSIN2Q9UNF0 486 aaPredicted RBP16.58■□□□□ 0.24
C9orf3-204ENST00000424143 QSER1Q2KHR3 1735 aa16.57■□□□□ 0.24
C9orf3-204ENST00000424143 EIF3DO15371 548 aaKnown RBP eCLIP16.57■□□□□ 0.24
C9orf3-204ENST00000424143 C21orf2O43822 256 aa16.57■□□□□ 0.24
C9orf3-204ENST00000424143 DNAJC8O75937 253 aaPredicted RBP16.57■□□□□ 0.24
C9orf3-204ENST00000424143 GSTA1P08263 222 aa16.57■□□□□ 0.24
C9orf3-204ENST00000424143 SLC9A1P19634 815 aa16.57■□□□□ 0.24
C9orf3-204ENST00000424143 SPIRE1Q08AE8 756 aa16.57■□□□□ 0.24
C9orf3-204ENST00000424143 XRCC4Q13426 336 aa16.57■□□□□ 0.24
C9orf3-204ENST00000424143 NELFCDQ8IXH7 590 aa16.57■□□□□ 0.24
C9orf3-204ENST00000424143 CACNA2D3Q8IZS8 1091 aa16.57■□□□□ 0.24
C9orf3-204ENST00000424143 RBM46Q8TBY0 533 aaKnown RBP16.57■□□□□ 0.24
C9orf3-204ENST00000424143 CERKQ8TCT0 537 aa16.57■□□□□ 0.24
C9orf3-204ENST00000424143 RFFLQ8WZ73 363 aa16.57■□□□□ 0.24
C9orf3-204ENST00000424143 RAPGEF5Q92565 580 aa16.57■□□□□ 0.24
C9orf3-204ENST00000424143 SYT11Q9BT88 431 aa16.57■□□□□ 0.24
C9orf3-204ENST00000424143 RABEP2Q9H5N1 569 aa16.57■□□□□ 0.24
C9orf3-204ENST00000424143 OLFML3Q9NRN5 406 aa16.57■□□□□ 0.24
C9orf3-204ENST00000424143 DNM3Q9UQ16 869 aa16.57■□□□□ 0.24
C9orf3-204ENST00000424143 JAG2Q9Y219 1238 aa16.57■□□□□ 0.24
C9orf3-204ENST00000424143 FRMPD2Q68DX3 1309 aaPredicted RBP16.56■□□□□ 0.24
C9orf3-204ENST00000424143 DDX3XO00571 662 aaKnown RBP eCLIP16.56■□□□□ 0.243e-11■■■□□ 16.8
C9orf3-204ENST00000424143 KRT18P05783 430 aaKnown RBP16.56■□□□□ 0.24
C9orf3-204ENST00000424143 RFX1P22670 979 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 HOXD13P35453 343 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 MMP14P50281 582 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 NBPF9Q3BBW0 867 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 ANKRD20A8PQ5CZ79 823 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 ERMARDQ5T6L9 678 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 RNF187Q5TA31 235 aaPredicted RBP16.56■□□□□ 0.24
C9orf3-204ENST00000424143 GKAP1Q5VSY0 366 aaPredicted RBP16.56■□□□□ 0.24
C9orf3-204ENST00000424143 DUPD1Q68J44 220 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 SLC35C1Q96A29 364 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 CCDC17Q96LX7 622 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 PSMD1Q99460 953 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 POLR3CQ9BUI4 534 aaPredicted RBP16.56■□□□□ 0.24
C9orf3-204ENST00000424143 STK33Q9BYT3 514 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 NEUROG2Q9H2A3 272 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 SLC40A1Q9NP59 571 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 POTEB3A0JP26 581 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 POTECB2RU33 542 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 ASAP2O43150 1006 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 DAPK3O43293 454 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 MED24O75448 989 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 GGPS1O95749 300 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 FOSP01100 380 aaPredicted RBP16.56■□□□□ 0.24
C9orf3-204ENST00000424143 SSBP05455 408 aaKnown RBP eCLIP16.56■□□□□ 0.24
C9orf3-204ENST00000424143 DRD4P21917 467 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 CIITAP33076 1130 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 MAP2K2P36507 400 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 ARID5AQ03989 594 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 UBE2SQ16763 222 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 POTEBQ6S5H4 581 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 BTNL9Q6UXG8 535 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 OLIG1Q8TAK6 271 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 ETNPPLQ8TBG4 499 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 MKL1Q969V6 931 aa16.56■□□□□ 0.24
C9orf3-204ENST00000424143 DDX3YO15523 660 aaKnown RBP16.55■□□□□ 0.24
C9orf3-204ENST00000424143 NR3C1P04150 777 aa16.55■□□□□ 0.24
C9orf3-204ENST00000424143 ACTN1P12814 892 aa16.55■□□□□ 0.24
C9orf3-204ENST00000424143 MUTP22033 750 aa16.55■□□□□ 0.24
C9orf3-204ENST00000424143 SOX5P35711 763 aa16.55■□□□□ 0.24
C9orf3-204ENST00000424143 ITIH4Q14624 930 aa16.55■□□□□ 0.24
C9orf3-204ENST00000424143 COL23A1Q86Y22 540 aaPredicted RBP16.55■□□□□ 0.24
C9orf3-204ENST00000424143 MORC4Q8TE76 937 aa16.55■□□□□ 0.24
C9orf3-204ENST00000424143 ATP8B4Q8TF62 1192 aa16.55■□□□□ 0.24
C9orf3-204ENST00000424143 DCAF4Q8WV16 495 aa16.55■□□□□ 0.24
C9orf3-204ENST00000424143 SGSM3Q96HU1 749 aa16.55■□□□□ 0.24
C9orf3-204ENST00000424143 CCDC114Q96M63 670 aa16.55■□□□□ 0.24
C9orf3-204ENST00000424143 RUNDC3BQ96NL0 473 aa16.55■□□□□ 0.24
C9orf3-204ENST00000424143 FMO2Q99518 471 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms