RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 PNISRQ8TF01 805 aaKnown RBP3.5□□□□□ -1.85
PMS1-209ENST00000424059 CLEC4DQ8WXI8 215 aa3.5□□□□□ -1.85
PMS1-209ENST00000424059 EDAQ92838 391 aa3.5□□□□□ -1.85
PMS1-209ENST00000424059 SCYL1Q96KG9 808 aa3.5□□□□□ -1.85
PMS1-209ENST00000424059 LMF1Q96S06 567 aa3.5□□□□□ -1.85
PMS1-209ENST00000424059 TINF2Q9BSI4 451 aa3.5□□□□□ -1.85
PMS1-209ENST00000424059 ALG1Q9BT22 464 aa3.5□□□□□ -1.85
PMS1-209ENST00000424059 MRIQ9BWK5 157 aa3.5□□□□□ -1.85
PMS1-209ENST00000424059 JAM3Q9BX67 310 aa3.5□□□□□ -1.85
PMS1-209ENST00000424059 GABBR1Q9UBS5 961 aa3.5□□□□□ -1.85
PMS1-209ENST00000424059 TRAV20A0A0B4J274 112 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 MSCO60682 206 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 WDHD1O75717 1129 aaPredicted RBP3.49□□□□□ -1.85
PMS1-209ENST00000424059 CKMP06732 381 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 CD151P48509 253 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 IFRD2Q12894 506 aaPredicted RBP3.49□□□□□ -1.85
PMS1-209ENST00000424059 PRKD1Q15139 912 aaPredicted RBP3.49□□□□□ -1.85
PMS1-209ENST00000424059 CDC37Q16543 378 aaPredicted RBP3.49□□□□□ -1.85
PMS1-209ENST00000424059 CD276Q5ZPR3 534 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 ZNF585AQ6P3V2 769 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 KCTD1Q719H9 257 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 CXXC5Q7LFL8 322 aaKnown RBP3.49□□□□□ -1.85
PMS1-209ENST00000424059 NLGN4XQ8N0W4 816 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 LSM14AQ8ND56 463 aaKnown RBP3.49□□□□□ -1.85
PMS1-209ENST00000424059 FAM210AQ96ND0 272 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 CARD11Q9BXL7 1154 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 SLITRK6Q9H5Y7 841 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 PPARGC1AQ9UBK2 798 aaKnown RBP3.49□□□□□ -1.85
PMS1-209ENST00000424059 PUF60Q9UHX1 559 aaKnown RBP3.49□□□□□ -1.85
PMS1-209ENST00000424059 DSEQ9UL01 958 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 ZCCHC6Q5VYS8 1495 aaKnown RBP3.49□□□□□ -1.85
PMS1-209ENST00000424059 PRODHO43272 600 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 PABPC1P11940 636 aaKnown RBP3.49□□□□□ -1.85
PMS1-209ENST00000424059 GJA4P35212 333 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 GRIA2P42262 883 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 PFKPQ01813 784 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 GRIN1Q05586 938 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 ZMAT1Q5H9K5 638 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 ICE2Q659A1 982 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 NSMFQ6X4W1 530 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 EP400NLQ6ZTU2 488 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 RPAINQ86UA6 219 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 MCF2L2Q86YR7 1114 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 WWC2-AS2Q96NR7 200 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 GMLQ99445 158 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 ARPC5LQ9BPX5 153 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 SCAND2PQ9GZW5 306 aaPredicted RBP3.49□□□□□ -1.85
PMS1-209ENST00000424059 RANBP17Q9H2T7 1088 aaKnown RBP3.49□□□□□ -1.85
PMS1-209ENST00000424059 ABCF2Q9UG63 623 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 ANAPC4Q9UJX5 808 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 FBXO10Q9UK96 956 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.49□□□□□ -1.85
PMS1-209ENST00000424059 CTDP1Q9Y5B0 961 aaPredicted RBP3.49□□□□□ -1.85
PMS1-209ENST00000424059 SBNO2Q9Y2G9 1366 aa3.49□□□□□ -1.85
PMS1-209ENST00000424059 WNT9AO14904 365 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 RAD17O75943 681 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 SLPIP03973 132 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 SOD2P04179 222 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 PEX19P40855 299 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 EVA1CP58658 441 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 MIIPQ5JXC2 388 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 MAMDC2Q7Z304 686 aaPredicted RBP3.48□□□□□ -1.85
PMS1-209ENST00000424059 POLNQ7Z5Q5 900 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 OSBP2Q969R2 916 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 MYCBPQ99417 103 aaPredicted RBP3.48□□□□□ -1.85
PMS1-209ENST00000424059 PCED1AQ9H1Q7 454 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 ARHGEF4Q9NR80 690 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 CHPF2Q9P2E5 772 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 PPP1R1BQ9UD71 204 aaPredicted RBP3.48□□□□□ -1.85
PMS1-209ENST00000424059 SWAP70Q9UH65 585 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 ZHX1Q9UKY1 873 aaPredicted RBP3.48□□□□□ -1.85
PMS1-209ENST00000424059 ZFR2Q9UPR6 939 aaKnown RBP3.48□□□□□ -1.85
PMS1-209ENST00000424059 SLC30A1Q9Y6M5 507 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 AQP7O14520 342 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 KLF4O43474 513 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 IGHDP01880 384 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 ETV4P43268 484 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 RAC3P60763 192 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 POU5F1Q01860 360 aaKnown RBP3.48□□□□□ -1.85
PMS1-209ENST00000424059 TOP3AQ13472 1001 aaPredicted RBP3.48□□□□□ -1.85
PMS1-209ENST00000424059 NFYCQ13952 458 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 NTRK3Q16288 839 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 SPDYAQ5MJ70 313 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 TCTN3Q6NUS6 607 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 ANKS3Q6ZW76 656 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 PALM2Q8IXS6 379 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 TTC30BQ8N4P2 665 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 STPG3Q8N7X2 389 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 GIMAP8Q8ND71 665 aaPredicted RBP3.48□□□□□ -1.85
PMS1-209ENST00000424059 HNRNPLLQ8WVV9 542 aaKnown RBP3.48□□□□□ -1.85
PMS1-209ENST00000424059 CHMP4CQ96CF2 233 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 NEIL1Q96FI4 390 aaPredicted RBP3.48□□□□□ -1.85
PMS1-209ENST00000424059 MAP7D2Q96T17 732 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 PAIP2Q9BPZ3 127 aaKnown RBP3.48□□□□□ -1.85
PMS1-209ENST00000424059 CCDC94Q9BW85 323 aaPredicted RBP3.48□□□□□ -1.85
PMS1-209ENST00000424059 INO80BQ9C086 356 aaPredicted RBP3.48□□□□□ -1.85
PMS1-209ENST00000424059 RBPJLQ9UBG7 517 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 CEP83Q9Y592 693 aa3.48□□□□□ -1.85
PMS1-209ENST00000424059 TGFB3P10600 412 aa3.47□□□□□ -1.85
PMS1-209ENST00000424059 VDRP11473 427 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms