RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 FBXO11Q86XK2 927 aa12.88□□□□□ -0.35
ERCC1-204ENST00000423698 SP8Q8IXZ3 490 aa12.88□□□□□ -0.35
ERCC1-204ENST00000423698 ALS2CR12Q96Q35 445 aa12.88□□□□□ -0.35
ERCC1-204ENST00000423698 TLR10Q9BXR5 811 aa12.88□□□□□ -0.35
ERCC1-204ENST00000423698 EPB41L5Q9HCM4 733 aa12.88□□□□□ -0.35
ERCC1-204ENST00000423698 ADAMTSL1Q8N6G6 1762 aa12.88□□□□□ -0.35
ERCC1-204ENST00000423698 EIF3HO15372 352 aaKnown RBP eCLIP12.88□□□□□ -0.35
ERCC1-204ENST00000423698 AKAP3O75969 853 aa12.88□□□□□ -0.35
ERCC1-204ENST00000423698 GFPT2O94808 682 aa12.88□□□□□ -0.35
ERCC1-204ENST00000423698 GLI1P08151 1106 aa12.88□□□□□ -0.35
ERCC1-204ENST00000423698 HLTFQ14527 1009 aaKnown RBP eCLIP12.88□□□□□ -0.35
ERCC1-204ENST00000423698 HGSNATQ68CP4 663 aa12.88□□□□□ -0.35
ERCC1-204ENST00000423698 C8orf74Q6P047 294 aa12.88□□□□□ -0.35
ERCC1-204ENST00000423698 CCDC170Q8IYT3 715 aa12.88□□□□□ -0.35
ERCC1-204ENST00000423698 TRIM58Q8NG06 486 aa12.88□□□□□ -0.35
ERCC1-204ENST00000423698 DHX36Q9H2U1 1008 aaKnown RBP12.88□□□□□ -0.35
ERCC1-204ENST00000423698 MYO1AQ9UBC5 1043 aa12.88□□□□□ -0.35
ERCC1-204ENST00000423698 PPP1R1BQ9UD71 204 aaPredicted RBP12.88□□□□□ -0.35
ERCC1-204ENST00000423698 DNM3Q9UQ16 869 aa12.88□□□□□ -0.35
ERCC1-204ENST00000423698 GRIN2DO15399 1336 aa12.87□□□□□ -0.35
ERCC1-204ENST00000423698 MYL1P05976 194 aa12.87□□□□□ -0.35
ERCC1-204ENST00000423698 TMEM119Q4V9L6 283 aa12.87□□□□□ -0.35
ERCC1-204ENST00000423698 CERKQ8TCT0 537 aa12.87□□□□□ -0.35
ERCC1-204ENST00000423698 FZD1Q9UP38 647 aa12.87□□□□□ -0.35
ERCC1-204ENST00000423698 PVALEFA0A1B0GWK0 134 aa12.87□□□□□ -0.35
ERCC1-204ENST00000423698 TMEM110-MUSTN1A8MSY1 372 aa12.87□□□□□ -0.35
ERCC1-204ENST00000423698 CETN3O15182 167 aa12.87□□□□□ -0.35
ERCC1-204ENST00000423698 PAFAH1B1P43034 410 aa12.87□□□□□ -0.35
ERCC1-204ENST00000423698 KLHDC7AQ5VTJ3 777 aa12.87□□□□□ -0.35
ERCC1-204ENST00000423698 CCNI2Q6ZMN8 369 aaPredicted RBP12.87□□□□□ -0.35
ERCC1-204ENST00000423698 NOX5Q96PH1 765 aa12.87□□□□□ -0.35
ERCC1-204ENST00000423698 NAV1Q8NEY1 1877 aa12.87□□□□□ -0.35
ERCC1-204ENST00000423698 LAMB1P07942 1786 aa12.87□□□□□ -0.35
ERCC1-204ENST00000423698 MSH4O15457 936 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 CEP104O60308 925 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 NAA25Q14CX7 972 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 ASIC2Q16515 512 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 GPATCH4Q5T3I0 446 aaKnown RBP12.86□□□□□ -0.35
ERCC1-204ENST00000423698 OR2W6PQ8NHA6 318 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 TBC1D31Q96DN5 1066 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 FAM163AQ96GL9 167 aaPredicted RBP12.86□□□□□ -0.35
ERCC1-204ENST00000423698 DYDC2Q96IM9 177 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 PURBQ96QR8 312 aaKnown RBP12.86□□□□□ -0.35
ERCC1-204ENST00000423698 ACP6Q9NPH0 428 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.86□□□□□ -0.35
ERCC1-204ENST00000423698 SNHG28P0DPA3 235 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 HPDP32754 393 aaPredicted RBP12.86□□□□□ -0.35
ERCC1-204ENST00000423698 LRRC63Q05C16 580 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 CKAP4Q07065 602 aaKnown RBP12.86□□□□□ -0.35
ERCC1-204ENST00000423698 PDIA5Q14554 519 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 PHLDB2Q86SQ0 1253 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 EHBP1Q8NDI1 1231 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 U2AF1L4Q8WU68 220 aaKnown RBP12.86□□□□□ -0.35
ERCC1-204ENST00000423698 MIEF2Q96C03 454 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 RUFY1Q96T51 708 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 ARMCX3Q9UH62 379 aaPredicted RBP12.86□□□□□ -0.35
ERCC1-204ENST00000423698 MYH7BA7E2Y1 1941 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 DNAH12Q6ZR08 3092 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 IGKV6D-41A0A0C4DH26 115 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 TBCAO75347 108 aaKnown RBP12.86□□□□□ -0.35
ERCC1-204ENST00000423698 CALCAP01258 141 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 SPATA31C1P0DKV0 1188 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 HOXD13P35453 343 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 PPFIA1Q13136 1202 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 SF3B2Q13435 895 aaKnown RBP12.86□□□□□ -0.35
ERCC1-204ENST00000423698 GIT2Q14161 759 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 ZNF571Q7Z3V5 609 aaPredicted RBP12.86□□□□□ -0.35
ERCC1-204ENST00000423698 RETREG2Q8NC44 543 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 AMNQ9BXJ7 453 aa12.86□□□□□ -0.35
ERCC1-204ENST00000423698 PPANQ9NQ55 473 aaKnown RBP12.86□□□□□ -0.35
ERCC1-204ENST00000423698 ANKRD33BA6NCL7 494 aa12.85□□□□□ -0.35
ERCC1-204ENST00000423698 HEXIM1O94992 359 aaKnown RBP12.85□□□□□ -0.35
ERCC1-204ENST00000423698 FGFR1OPO95684 399 aaKnown RBP12.85□□□□□ -0.35
ERCC1-204ENST00000423698 AARSP49588 968 aaKnown RBP eCLIP12.85□□□□□ -0.352e-10■■■■■ 106.5
ERCC1-204ENST00000423698 CLK2P49760 499 aaKnown RBP12.85□□□□□ -0.35
ERCC1-204ENST00000423698 CLNS1AP54105 237 aaKnown RBP12.85□□□□□ -0.35
ERCC1-204ENST00000423698 TTMPQ5BVD1 217 aa12.85□□□□□ -0.35
ERCC1-204ENST00000423698 PPP4R3AQ6IN85 833 aa12.85□□□□□ -0.35
ERCC1-204ENST00000423698 ZNF746Q6NUN9 644 aaPredicted RBP12.85□□□□□ -0.35
ERCC1-204ENST00000423698 ZSWIM2Q8NEG5 633 aa12.85□□□□□ -0.35
ERCC1-204ENST00000423698 CRAMP1Q96RY5 1269 aa12.85□□□□□ -0.35
ERCC1-204ENST00000423698 MAGEF1Q9HAY2 307 aa12.85□□□□□ -0.35
ERCC1-204ENST00000423698 PI4KBQ9UBF8 816 aa12.85□□□□□ -0.35
ERCC1-204ENST00000423698 USP20Q9Y2K6 914 aa12.85□□□□□ -0.35
ERCC1-204ENST00000423698 ESYT2A0FGR8 921 aa12.85□□□□□ -0.35
ERCC1-204ENST00000423698 OPLAHO14841 1288 aa12.85□□□□□ -0.35
ERCC1-204ENST00000423698 NEDD9Q14511 834 aa12.85□□□□□ -0.35
ERCC1-204ENST00000423698 CEP85LQ5SZL2 805 aa12.85□□□□□ -0.35
ERCC1-204ENST00000423698 SYDE2Q5VT97 1194 aa12.85□□□□□ -0.35
ERCC1-204ENST00000423698 CCDC70Q6NSX1 233 aa12.85□□□□□ -0.35
ERCC1-204ENST00000423698 WDR93Q6P2C0 686 aa12.85□□□□□ -0.35
ERCC1-204ENST00000423698 EIF2AK1Q9BQI3 630 aaKnown RBP12.85□□□□□ -0.35
ERCC1-204ENST00000423698 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.85□□□□□ -0.351e-8■□□□□ 10.8
ERCC1-204ENST00000423698 KLC4Q9NSK0 619 aa12.85□□□□□ -0.35
ERCC1-204ENST00000423698 GCNT4Q9P109 453 aa12.85□□□□□ -0.35
ERCC1-204ENST00000423698 SBF2Q86WG5 1849 aa12.85□□□□□ -0.35
ERCC1-204ENST00000423698 BMP3P12645 472 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 SLC12A3P55017 1021 aa12.84□□□□□ -0.35
ERCC1-204ENST00000423698 ZNF211Q13398 564 aaPredicted RBP12.84□□□□□ -0.35
ERCC1-204ENST00000423698 EXOC3L4Q17RC7 722 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms