RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 TLE2Q04725 743 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 FSCN1Q16658 493 aaKnown RBP3.9□□□□□ -1.78
TOP2A-201ENST00000423485 PABPC1LQ4VXU2 614 aaKnown RBP3.9□□□□□ -1.78
TOP2A-201ENST00000423485 CTR9Q6PD62 1173 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 SAPCD2Q86UD0 394 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 DCP1BQ8IZD4 617 aaKnown RBP3.9□□□□□ -1.78
TOP2A-201ENST00000423485 CACTINQ8WUQ7 758 aaKnown RBP3.9□□□□□ -1.78
TOP2A-201ENST00000423485 SPIRE2Q8WWL2 714 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 TTC25Q96NG3 672 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 IDI2Q9BXS1 227 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 PRR12Q9ULL5 1215 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 RUVBL2Q9Y230 463 aaKnown RBP3.9□□□□□ -1.78
TOP2A-201ENST00000423485 ZBTB7BO15156 539 aaPredicted RBP3.9□□□□□ -1.79
TOP2A-201ENST00000423485 STK10O94804 968 aaKnown RBP3.9□□□□□ -1.79
TOP2A-201ENST00000423485 PSAPP07602 524 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 NBPF7P0C2Y1 421 aaPredicted RBP3.9□□□□□ -1.79
TOP2A-201ENST00000423485 NOVA1P51513 510 aaKnown RBP3.9□□□□□ -1.79
TOP2A-201ENST00000423485 SETQ01105 290 aaPredicted RBP3.9□□□□□ -1.79
TOP2A-201ENST00000423485 CHRNDQ07001 517 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 ABRQ12979 859 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 MEI1Q5TIA1 1274 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 TMED8Q6PL24 325 aaPredicted RBP3.9□□□□□ -1.79
TOP2A-201ENST00000423485 ERMP1Q7Z2K6 904 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 PDCL2Q8N4E4 241 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 BANK1Q8NDB2 785 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 MCCC1Q96RQ3 725 aaPredicted RBP3.9□□□□□ -1.79
TOP2A-201ENST00000423485 RTKNQ9BST9 563 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 PHF20Q9BVI0 1012 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 DCLK3Q9C098 648 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 C1orf112Q9NSG2 853 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 SAE1Q9UBE0 346 aaPredicted RBP3.9□□□□□ -1.79
TOP2A-201ENST00000423485 ARPP21Q9UBL0 812 aaPredicted RBP3.9□□□□□ -1.79
TOP2A-201ENST00000423485 ABCB11O95342 1321 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 IGSF9BQ9UPX0 1349 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 FER1L6Q2WGJ9 1857 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 A0A0B4J269 797 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 DDX39AO00148 427 aaKnown RBP3.9□□□□□ -1.79
TOP2A-201ENST00000423485 CASKO14936 926 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 ACRP10323 421 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 BMP3P12645 472 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 SELPP16109 830 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 LMAN1P49257 510 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 AARSP49588 968 aaKnown RBP eCLIP3.9□□□□□ -1.797e-9■■□□□ 13.3
TOP2A-201ENST00000423485 CLCN6P51797 869 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 AMPD3Q01432 767 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 MC1RQ01726 317 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 FAM110CQ1W6H9 321 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 SKOR2Q2VWA4 1001 aaPredicted RBP3.9□□□□□ -1.79
TOP2A-201ENST00000423485 VWA2Q5GFL6 755 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 C4orf50Q6ZRC1 276 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 HEATR4Q86WZ0 1026 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 NRSN1Q8IZ57 195 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 TRIML1Q8N9V2 468 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 SNIP1Q8TAD8 396 aaKnown RBP3.9□□□□□ -1.79
TOP2A-201ENST00000423485 GPR152Q8TDT2 470 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 PXYLP1Q8TE99 480 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 SHISA4Q96DD7 197 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 LZTS2Q9BRK4 669 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 THUMPD2Q9BTF0 503 aaKnown RBP3.9□□□□□ -1.79
TOP2A-201ENST00000423485 RNF146Q9NTX7 359 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 MIS18AQ9NYP9 233 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 SERPINA10Q9UK55 444 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 USP16Q9Y5T5 823 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 KCPQ6ZWJ8 1503 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 CSMD3Q7Z407 3707 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 MAP3K19Q56UN5 1328 aa3.9□□□□□ -1.79
TOP2A-201ENST00000423485 SBF2Q86WG5 1849 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 BNIP3LO60238 219 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 LETM1O95202 739 aaPredicted RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 ATP1A1P05023 1023 aaKnown RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 APODP05090 189 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 ITGA4P13612 1032 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 RGS3P49796 1198 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 RAB27AP51159 221 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 CCR3P51677 355 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 UCNP55089 124 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 CREB5Q02930 508 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 ZSCAN23Q3MJ62 389 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 DCAF6Q58WW2 860 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 CNNM4Q6P4Q7 775 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 ZNF852Q6ZMS4 543 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 TBC1D19Q8N5T2 526 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 TTC1Q99614 292 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 CNPPD1Q9BV87 410 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 NEUROD4Q9HD90 331 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 BRPF3Q9ULD4 1205 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 AGTPBP1Q9UPW5 1226 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 PCDHA11Q9Y5I1 949 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 ROBO2Q9HCK4 1378 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 TBC1D3DA0A087WVF3 549 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 TBC1D3IA0A087WXS9 549 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 TBC1D3EA0A087X179 549 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 TBC1D3KA0A087X1G2 549 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 ARHGEF35A5YM69 484 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 TBC1D3FA6NER0 549 aaPredicted RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 TBC1D3LB9A6J9 549 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 TBC1D3HP0C7X1 549 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 HSPD1P10809 573 aaKnown RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 GTF2H3Q13889 308 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 WDR44Q5JSH3 913 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms