RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 RARRES1P49788 294 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 IGBP1P78318 339 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 FAM160A1Q05DH4 1040 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 PPFIA1Q13136 1202 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 SNW1Q13573 536 aaKnown RBP17.53■□□□□ 0.4
DDX55-203ENST00000421670 DHX8Q14562 1220 aaKnown RBP17.53■□□□□ 0.4
DDX55-203ENST00000421670 MCM6Q14566 821 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 XKR9Q5GH70 373 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 ENGASEQ8NFI3 743 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 LARP4BQ92615 738 aaKnown RBP17.53■□□□□ 0.4
DDX55-203ENST00000421670 RAD54LQ92698 747 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 ZBTB10Q96DT7 871 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 STARD7Q9NQZ5 370 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 CYP26B1Q9NR63 512 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 NRBP2Q9NSY0 501 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 BMP2KQ9NSY1 1161 aaPredicted RBP17.53■□□□□ 0.4
DDX55-203ENST00000421670 STK17AQ9UEE5 414 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 ALPK3Q96L96 1907 aa17.52■□□□□ 0.4
DDX55-203ENST00000421670 HBP1O60381 514 aa17.52■□□□□ 0.39
DDX55-203ENST00000421670 EYA4O95677 639 aa17.52■□□□□ 0.39
DDX55-203ENST00000421670 PLA2G4BP0C869 781 aa17.52■□□□□ 0.39
DDX55-203ENST00000421670 EN2P19622 333 aaPredicted RBP17.52■□□□□ 0.39
DDX55-203ENST00000421670 HIC1Q14526 733 aa17.52■□□□□ 0.39
DDX55-203ENST00000421670 GRIK4Q16099 956 aa17.52■□□□□ 0.39
DDX55-203ENST00000421670 LONRF3Q496Y0 759 aa17.52■□□□□ 0.39
DDX55-203ENST00000421670 FAM47CQ5HY64 1035 aa17.52■□□□□ 0.39
DDX55-203ENST00000421670 OTUD6AQ7L8S5 288 aa17.52■□□□□ 0.39
DDX55-203ENST00000421670 C7orf31Q8N865 590 aa17.52■□□□□ 0.39
DDX55-203ENST00000421670 IQUBQ8NA54 791 aa17.52■□□□□ 0.39
DDX55-203ENST00000421670 ANKLE1Q8NAG6 615 aa17.52■□□□□ 0.39
DDX55-203ENST00000421670 GPT2Q8TD30 523 aa17.52■□□□□ 0.39
DDX55-203ENST00000421670 LMBR1Q8WVP7 490 aa17.52■□□□□ 0.39
DDX55-203ENST00000421670 CEP170P1Q96L14 293 aa17.52■□□□□ 0.39
DDX55-203ENST00000421670 NIFKQ9BYG3 293 aaKnown RBP17.52■□□□□ 0.39
DDX55-203ENST00000421670 SENP6Q9GZR1 1112 aaPredicted RBP17.52■□□□□ 0.39
DDX55-203ENST00000421670 ANKEF1Q9NU02 776 aa17.52■□□□□ 0.39
DDX55-203ENST00000421670 SETD4Q9NVD3 440 aa17.52■□□□□ 0.39
DDX55-203ENST00000421670 HDAC6Q9UBN7 1215 aa17.52■□□□□ 0.39
DDX55-203ENST00000421670 SERTAD1Q9UHV2 236 aa17.52■□□□□ 0.39
DDX55-203ENST00000421670 DBR1Q9UK59 544 aaKnown RBP17.52■□□□□ 0.39
DDX55-203ENST00000421670 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.51■□□□□ 0.39
DDX55-203ENST00000421670 ARHGEF35A5YM69 484 aa17.51■□□□□ 0.39
DDX55-203ENST00000421670 ACTN4O43707 911 aaKnown RBP17.51■□□□□ 0.39
DDX55-203ENST00000421670 ZNF202O95125 648 aa17.51■□□□□ 0.39
DDX55-203ENST00000421670 SLC12A3P55017 1021 aa17.51■□□□□ 0.39
DDX55-203ENST00000421670 ITGA7Q13683 1181 aa17.51■□□□□ 0.39
DDX55-203ENST00000421670 STAMQ92783 540 aa17.51■□□□□ 0.39
DDX55-203ENST00000421670 COL1A2P08123 1366 aa17.51■□□□□ 0.39
DDX55-203ENST00000421670 USO1O60763 962 aaKnown RBP17.5■□□□□ 0.39
DDX55-203ENST00000421670 XRCC6P12956 609 aaKnown RBP eCLIP17.5■□□□□ 0.39
DDX55-203ENST00000421670 TARBP2Q15633 366 aaKnown RBP17.5■□□□□ 0.39
DDX55-203ENST00000421670 GRAMD1CQ8IYS0 662 aa17.5■□□□□ 0.39
DDX55-203ENST00000421670 KCTD17Q8N5Z5 321 aa17.5■□□□□ 0.39
DDX55-203ENST00000421670 PAWRQ96IZ0 340 aaKnown RBP17.5■□□□□ 0.39
DDX55-203ENST00000421670 CEP89Q96ST8 783 aa17.5■□□□□ 0.39
DDX55-203ENST00000421670 PYM1Q9BRP8 204 aaKnown RBP17.5■□□□□ 0.39
DDX55-203ENST00000421670 DACT1Q9NYF0 836 aa17.5■□□□□ 0.39
DDX55-203ENST00000421670 NRCAMQ92823 1304 aa17.5■□□□□ 0.39
DDX55-203ENST00000421670 A0A0U1RQG5 324 aaPredicted RBP17.49■□□□□ 0.39
DDX55-203ENST00000421670 COL6A1P12109 1028 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 ATN1P54259 1190 aaPredicted RBP17.49■□□□□ 0.39
DDX55-203ENST00000421670 ZNF200P98182 395 aaPredicted RBP17.49■□□□□ 0.39
DDX55-203ENST00000421670 ZNF484Q5JVG2 852 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 MARCH8Q5T0T0 291 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 NFRKBQ6P4R8 1299 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 CEP57L1Q8IYX8 460 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 TNS4Q8IZW8 715 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 SYT2Q8N9I0 419 aaPredicted RBP17.49■□□□□ 0.39
DDX55-203ENST00000421670 RUSC1Q9BVN2 902 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 CUEDC2Q9H467 287 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 GTF2IRD1Q9UHL9 959 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 SIP14410 1827 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 C17orf102A2RUQ5 167 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 SLFN14P0C7P3 912 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 HOXC8P31273 242 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 POLGP54098 1239 aaPredicted RBP17.49■□□□□ 0.39
DDX55-203ENST00000421670 SOX10P56693 466 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 RAD51AP2Q09MP3 1159 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 TBC1D8BQ0IIM8 1120 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 GDF6Q6KF10 455 aaPredicted RBP17.49■□□□□ 0.39
DDX55-203ENST00000421670 PADI6Q6TGC4 694 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 KRBA2Q6ZNG9 492 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 GPBP1Q86WP2 473 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 CNNM3Q8NE01 707 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 MTRQ99707 1265 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 C11orf49Q9H6J7 331 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 TUBE1Q9UJT0 475 aa17.49■□□□□ 0.39
DDX55-203ENST00000421670 NPHP3-ACAD11A0A0J9YXS1 232 aa17.48■□□□□ 0.39
DDX55-203ENST00000421670 KINO60870 393 aaKnown RBP17.48■□□□□ 0.39
DDX55-203ENST00000421670 C22orf31O95567 290 aa17.48■□□□□ 0.39
DDX55-203ENST00000421670 CASP1P29466 404 aa17.48■□□□□ 0.39
DDX55-203ENST00000421670 AFMP43652 599 aa17.48■□□□□ 0.39
DDX55-203ENST00000421670 EMC2Q15006 297 aa17.48■□□□□ 0.39
DDX55-203ENST00000421670 NFKBIBQ15653 356 aa17.48■□□□□ 0.39
DDX55-203ENST00000421670 SV2BQ7L1I2 683 aa17.48■□□□□ 0.39
DDX55-203ENST00000421670 SESTD1Q86VW0 696 aa17.48■□□□□ 0.39
DDX55-203ENST00000421670 TNMDQ9H2S6 317 aa17.48■□□□□ 0.39
DDX55-203ENST00000421670 KBTBD4Q9NVX7 518 aa17.48■□□□□ 0.39
DDX55-203ENST00000421670 RRN3P2A6NIE6 340 aa17.47■□□□□ 0.39
DDX55-203ENST00000421670 CCDC85CA6NKD9 419 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms