RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 HOXC8P31273 242 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 IGBP1P78318 339 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 MTERF2Q49AM1 385 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 ZNF484Q5JVG2 852 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 RRAGBQ5VZM2 374 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 CCDC73Q6ZRK6 1079 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 CEP170P1Q96L14 293 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 CYP26B1Q9NR63 512 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 DBR1Q9UK59 544 aaKnown RBP19.57■□□□□ 0.72
LINC00271-201ENST00000421378 KCNH3Q9ULD8 1083 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 LOXHD1Q8IVV2 1947 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 A0A087X0B3 334 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 A0A1B0GVL5 298 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 RRN3P2A6NIE6 340 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 E9PMD0 336 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 GOLGA6L22H0YM25 854 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 PFKFB1P16118 471 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 RARRES1P49788 294 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 NPEPPSP55786 919 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 SNX17Q15036 470 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 XKR9Q5GH70 373 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 C1orf53Q5VUE5 145 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 KCNK18Q7Z418 384 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 FSIP1Q8NA03 581 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 TRAPPC12Q8WVT3 735 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 PANK2Q9BZ23 570 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 BHMT2Q9H2M3 363 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 STK17AQ9UEE5 414 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 TUBE1Q9UJT0 475 aa19.57■□□□□ 0.72
LINC00271-201ENST00000421378 ARID2Q68CP9 1835 aa19.56■□□□□ 0.72
LINC00271-201ENST00000421378 KAT6AQ92794 2004 aa19.56■□□□□ 0.72
LINC00271-201ENST00000421378 PRPF40AO75400 957 aaKnown RBP19.56■□□□□ 0.72
LINC00271-201ENST00000421378 STAT6P42226 847 aa19.56■□□□□ 0.72
LINC00271-201ENST00000421378 CDK7P50613 346 aa19.56■□□□□ 0.72
LINC00271-201ENST00000421378 TARBP2Q15633 366 aaKnown RBP19.56■□□□□ 0.72
LINC00271-201ENST00000421378 GDF6Q6KF10 455 aaPredicted RBP19.56■□□□□ 0.72
LINC00271-201ENST00000421378 PYM1Q9BRP8 204 aaKnown RBP19.56■□□□□ 0.72
LINC00271-201ENST00000421378 HPSEQ9Y251 543 aa19.56■□□□□ 0.72
LINC00271-201ENST00000421378 PPME1Q9Y570 386 aa19.56■□□□□ 0.72
LINC00271-201ENST00000421378 ARHGEF35A5YM69 484 aa19.55■□□□□ 0.72
LINC00271-201ENST00000421378 POLR2DO15514 142 aaKnown RBP19.55■□□□□ 0.72
LINC00271-201ENST00000421378 EYA4O95677 639 aa19.55■□□□□ 0.72
LINC00271-201ENST00000421378 ADAM17P78536 824 aa19.55■□□□□ 0.72
LINC00271-201ENST00000421378 TBC1D8BQ0IIM8 1120 aa19.55■□□□□ 0.72
LINC00271-201ENST00000421378 HIC1Q14526 733 aa19.55■□□□□ 0.72
LINC00271-201ENST00000421378 LRRC15Q8TF66 581 aa19.55■□□□□ 0.72
LINC00271-201ENST00000421378 LARP4BQ92615 738 aaKnown RBP19.55■□□□□ 0.72
LINC00271-201ENST00000421378 TRMT13Q9NUP7 481 aaKnown RBP19.55■□□□□ 0.72
LINC00271-201ENST00000421378 NOD1Q9Y239 953 aa19.55■□□□□ 0.72
LINC00271-201ENST00000421378 FAM237AA0A1B0GTK4 181 aa19.54■□□□□ 0.72
LINC00271-201ENST00000421378 MBLAC1A4D2B0 266 aaPredicted RBP19.54■□□□□ 0.72
LINC00271-201ENST00000421378 B4GALT4O60513 344 aa19.54■□□□□ 0.72
LINC00271-201ENST00000421378 PQBP1O60828 265 aaKnown RBP19.54■□□□□ 0.72
LINC00271-201ENST00000421378 GADD45BO75293 160 aaPredicted RBP19.54■□□□□ 0.72
LINC00271-201ENST00000421378 NDUFA8P51970 172 aa19.54■□□□□ 0.72
LINC00271-201ENST00000421378 UBE2HP62256 183 aa19.54■□□□□ 0.72
LINC00271-201ENST00000421378 PTGISQ16647 500 aa19.54■□□□□ 0.72
LINC00271-201ENST00000421378 LRRC26Q2I0M4 334 aa19.54■□□□□ 0.72
LINC00271-201ENST00000421378 TRIM60Q495X7 471 aa19.54■□□□□ 0.72
LINC00271-201ENST00000421378 NAALADL2Q58DX5 795 aa19.54■□□□□ 0.72
LINC00271-201ENST00000421378 MARCH8Q5T0T0 291 aa19.54■□□□□ 0.72
LINC00271-201ENST00000421378 ANKRD33Q7Z3H0 272 aa19.54■□□□□ 0.72
LINC00271-201ENST00000421378 FAM126BQ8IXS8 530 aa19.54■□□□□ 0.72
LINC00271-201ENST00000421378 IQUBQ8NA54 791 aa19.54■□□□□ 0.72
LINC00271-201ENST00000421378 SLC7A3Q8WY07 619 aa19.54■□□□□ 0.72
LINC00271-201ENST00000421378 RAD54LQ92698 747 aa19.54■□□□□ 0.72
LINC00271-201ENST00000421378 DHX58Q96C10 678 aa19.54■□□□□ 0.72
LINC00271-201ENST00000421378 GOLPH3LQ9H4A5 285 aa19.54■□□□□ 0.72
LINC00271-201ENST00000421378 BLOC1S4Q9NUP1 217 aa19.54■□□□□ 0.72
LINC00271-201ENST00000421378 TREHO43280 583 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 C22orf31O95567 290 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 SSBP05455 408 aaKnown RBP eCLIP19.53■□□□□ 0.72
LINC00271-201ENST00000421378 PLA2G4BP0C869 781 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 KLRC1P26715 233 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 SYKP43405 635 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 POLGP54098 1239 aaPredicted RBP19.53■□□□□ 0.72
LINC00271-201ENST00000421378 ZNF200P98182 395 aaPredicted RBP19.53■□□□□ 0.72
LINC00271-201ENST00000421378 E2F4Q16254 413 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 MTHFD1LQ6UB35 978 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 CEP89Q96ST8 783 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 MAGEB2O15479 319 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 USO1O60763 962 aaKnown RBP19.53■□□□□ 0.72
LINC00271-201ENST00000421378 DGAT1O75907 488 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 RFC5P40937 340 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 SLC12A3P55017 1021 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 RTP1P59025 263 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 PADI6Q6TGC4 694 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 EXOC8Q8IYI6 725 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 SYT2Q8N9I0 419 aaPredicted RBP19.53■□□□□ 0.72
LINC00271-201ENST00000421378 RETREG2Q8NC44 543 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 ZBTB10Q96DT7 871 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 TOX2Q96NM4 488 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 JPH2Q9BR39 696 aaPredicted RBP19.53■□□□□ 0.72
LINC00271-201ENST00000421378 TRPV6Q9H1D0 765 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 CUEDC2Q9H467 287 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 DHX33Q9H6R0 707 aaKnown RBP19.53■□□□□ 0.72
LINC00271-201ENST00000421378 BMP2KQ9NSY1 1161 aaPredicted RBP19.53■□□□□ 0.72
LINC00271-201ENST00000421378 ATP11BQ9Y2G3 1177 aa19.53■□□□□ 0.72
LINC00271-201ENST00000421378 DCDC2CA8MYV0 355 aa19.52■□□□□ 0.71
LINC00271-201ENST00000421378 TLR3O15455 904 aaKnown RBP19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms