RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 SZT2Q5T011 3432 aa18.58■□□□□ 0.57
SEC22C-206ENST00000420163 FGBP02675 491 aa18.58■□□□□ 0.56
SEC22C-206ENST00000420163 P4HBP07237 508 aaKnown RBP18.58■□□□□ 0.56
SEC22C-206ENST00000420163 TECP42680 631 aa18.58■□□□□ 0.56
SEC22C-206ENST00000420163 FXR1P51114 621 aaKnown RBP eCLIP18.58■□□□□ 0.56
SEC22C-206ENST00000420163 TMEM62Q0P6H9 643 aa18.58■□□□□ 0.56
SEC22C-206ENST00000420163 RESTQ13127 1097 aa18.58■□□□□ 0.56
SEC22C-206ENST00000420163 LRIT3Q3SXY7 679 aa18.58■□□□□ 0.56
SEC22C-206ENST00000420163 MTERF2Q49AM1 385 aa18.58■□□□□ 0.56
SEC22C-206ENST00000420163 FAM26DQ5JW98 314 aa18.58■□□□□ 0.56
SEC22C-206ENST00000420163 RPUSD2Q8IZ73 545 aaKnown RBP18.58■□□□□ 0.56
SEC22C-206ENST00000420163 SPRYD3Q8NCJ5 442 aa18.58■□□□□ 0.56
SEC22C-206ENST00000420163 HERVK_113Q902F9 699 aa18.58■□□□□ 0.56
SEC22C-206ENST00000420163 CEP89Q96ST8 783 aa18.58■□□□□ 0.56
SEC22C-206ENST00000420163 FTOQ9C0B1 505 aaKnown RBP eCLIP18.58■□□□□ 0.56
SEC22C-206ENST00000420163 NRBP2Q9NSY0 501 aa18.58■□□□□ 0.56
SEC22C-206ENST00000420163 SMIM35A0A1B0GVV1 85 aa18.57■□□□□ 0.56
SEC22C-206ENST00000420163 DDX11L8A8MPP1 907 aa18.57■□□□□ 0.56
SEC22C-206ENST00000420163 ZBTB39O15060 712 aa18.57■□□□□ 0.56
SEC22C-206ENST00000420163 SLITRK3O94933 977 aa18.57■□□□□ 0.56
SEC22C-206ENST00000420163 PFKMP08237 780 aa18.57■□□□□ 0.56
SEC22C-206ENST00000420163 CLCN3P51790 818 aa18.57■□□□□ 0.56
SEC22C-206ENST00000420163 MRPS6P82932 125 aaKnown RBP18.57■□□□□ 0.56
SEC22C-206ENST00000420163 IL17AQ16552 155 aa18.57■□□□□ 0.56
SEC22C-206ENST00000420163 FAM109BQ6ICB4 259 aaPredicted RBP18.57■□□□□ 0.56
SEC22C-206ENST00000420163 LINC01465Q8N7H1 131 aa18.57■□□□□ 0.56
SEC22C-206ENST00000420163 ZNF579Q8NAF0 562 aaKnown RBP18.57■□□□□ 0.56
SEC22C-206ENST00000420163 LRCH3Q96II8 777 aa18.57■□□□□ 0.56
SEC22C-206ENST00000420163 HSD17B14Q9BPX1 270 aa18.57■□□□□ 0.56
SEC22C-206ENST00000420163 NIFKQ9BYG3 293 aaKnown RBP18.57■□□□□ 0.56
SEC22C-206ENST00000420163 CEP131Q9UPN4 1083 aa18.57■□□□□ 0.56
SEC22C-206ENST00000420163 CDY2AQ9Y6F7 541 aa18.57■□□□□ 0.56
SEC22C-206ENST00000420163 NPEPPSP55786 919 aa18.56■□□□□ 0.56
SEC22C-206ENST00000420163 ATP2C1P98194 919 aaPredicted RBP18.56■□□□□ 0.56
SEC22C-206ENST00000420163 FAM173BQ6P4H8 233 aa18.56■□□□□ 0.56
SEC22C-206ENST00000420163 BRAPQ7Z569 592 aa18.56■□□□□ 0.56
SEC22C-206ENST00000420163 RSPH3Q86UC2 560 aa18.56■□□□□ 0.56
SEC22C-206ENST00000420163 KIAA0319LQ8IZA0 1049 aa18.56■□□□□ 0.56
SEC22C-206ENST00000420163 LRRC71Q8N4P6 559 aa18.56■□□□□ 0.56
SEC22C-206ENST00000420163 A0A087WWV3 80 aa18.55■□□□□ 0.56
SEC22C-206ENST00000420163 STX6O43752 255 aa18.55■□□□□ 0.56
SEC22C-206ENST00000420163 MED24O75448 989 aa18.55■□□□□ 0.56
SEC22C-206ENST00000420163 PARNO95453 639 aaKnown RBP18.55■□□□□ 0.56
SEC22C-206ENST00000420163 HSP90AA1P07900 732 aaKnown RBP18.55■□□□□ 0.56
SEC22C-206ENST00000420163 SPATA31C1P0DKV0 1188 aa18.55■□□□□ 0.56
SEC22C-206ENST00000420163 FXR2P51116 673 aaKnown RBP eCLIP18.55■□□□□ 0.56
SEC22C-206ENST00000420163 TPH2Q8IWU9 490 aa18.55■□□□□ 0.56
SEC22C-206ENST00000420163 C4orf19Q8IY42 314 aa18.55■□□□□ 0.56
SEC22C-206ENST00000420163 METTL13Q8N6R0 699 aa18.55■□□□□ 0.56
SEC22C-206ENST00000420163 PPP1R16BQ96T49 567 aa18.55■□□□□ 0.56
SEC22C-206ENST00000420163 ZSWIM4Q9H7M6 989 aa18.55■□□□□ 0.56
SEC22C-206ENST00000420163 TRPV2Q9Y5S1 764 aa18.55■□□□□ 0.56
SEC22C-206ENST00000420163 ZBBXA8MT70 800 aa18.54■□□□□ 0.56
SEC22C-206ENST00000420163 GRXCR1A8MXD5 290 aa18.54■□□□□ 0.56
SEC22C-206ENST00000420163 MAGEB2O15479 319 aa18.54■□□□□ 0.56
SEC22C-206ENST00000420163 VTNP04004 478 aa18.54■□□□□ 0.56
SEC22C-206ENST00000420163 GHRP10912 638 aa18.54■□□□□ 0.56
SEC22C-206ENST00000420163 TBC1D8BQ0IIM8 1120 aa18.54■□□□□ 0.56
SEC22C-206ENST00000420163 MKRN4PQ13434 485 aaPredicted RBP18.54■□□□□ 0.56
SEC22C-206ENST00000420163 DRP2Q13474 957 aa18.54■□□□□ 0.56
SEC22C-206ENST00000420163 LPIN1Q14693 890 aa18.54■□□□□ 0.56
SEC22C-206ENST00000420163 TMEM266Q2M3C6 531 aa18.54■□□□□ 0.56
SEC22C-206ENST00000420163 PLEKHG4Q58EX7 1191 aa18.54■□□□□ 0.56
SEC22C-206ENST00000420163 FBXO47Q5MNV8 452 aa18.54■□□□□ 0.56
SEC22C-206ENST00000420163 EFCAB12Q6NXP0 572 aa18.54■□□□□ 0.56
SEC22C-206ENST00000420163 CNKSR3Q6P9H4 555 aa18.54■□□□□ 0.56
SEC22C-206ENST00000420163 DBF4BQ8NFT6 615 aa18.54■□□□□ 0.56
SEC22C-206ENST00000420163 NEK9Q8TD19 979 aa18.54■□□□□ 0.56
SEC22C-206ENST00000420163 CDHR5Q9HBB8 845 aa18.54■□□□□ 0.56
SEC22C-206ENST00000420163 PP2D1A8MPX8 630 aa18.53■□□□□ 0.56
SEC22C-206ENST00000420163 LAD1O00515 517 aa18.53■□□□□ 0.56
SEC22C-206ENST00000420163 DKC1O60832 514 aaKnown RBP eCLIP18.53■□□□□ 0.56
SEC22C-206ENST00000420163 LYPLA2O95372 231 aa18.53■□□□□ 0.56
SEC22C-206ENST00000420163 YWHABP31946 246 aaKnown RBP18.53■□□□□ 0.56
SEC22C-206ENST00000420163 PRPHP41219 470 aa18.53■□□□□ 0.56
SEC22C-206ENST00000420163 CATSPER3Q86XQ3 398 aa18.53■□□□□ 0.56
SEC22C-206ENST00000420163 IGSF22Q8N9C0 903 aa18.53■□□□□ 0.56
SEC22C-206ENST00000420163 CELF4Q9BZC1 486 aaKnown RBP18.53■□□□□ 0.56
SEC22C-206ENST00000420163 SUGCTQ9HAC7 445 aa18.53■□□□□ 0.56
SEC22C-206ENST00000420163 CYP26B1Q9NR63 512 aa18.53■□□□□ 0.56
SEC22C-206ENST00000420163 BMP2KQ9NSY1 1161 aaPredicted RBP18.53■□□□□ 0.56
SEC22C-206ENST00000420163 IGKV6-21A0A0C4DH24 114 aa18.52■□□□□ 0.56
SEC22C-206ENST00000420163 ACTN1P12814 892 aa18.52■□□□□ 0.56
SEC22C-206ENST00000420163 PKP1Q13835 747 aa18.52■□□□□ 0.56
SEC22C-206ENST00000420163 IER5Q5VY09 327 aa18.52■□□□□ 0.56
SEC22C-206ENST00000420163 POTEGQ6S5H5 508 aa18.52■□□□□ 0.56
SEC22C-206ENST00000420163 NME8Q8N427 588 aa18.52■□□□□ 0.56
SEC22C-206ENST00000420163 TMEM40Q8WWA1 233 aa18.52■□□□□ 0.56
SEC22C-206ENST00000420163 CEP170P1Q96L14 293 aa18.52■□□□□ 0.56
SEC22C-206ENST00000420163 POLR3CQ9BUI4 534 aaPredicted RBP18.52■□□□□ 0.56
SEC22C-206ENST00000420163 AGO3Q9H9G7 860 aaKnown RBP18.52■□□□□ 0.56
SEC22C-206ENST00000420163 TUFT1Q9NNX1 390 aa18.52■□□□□ 0.56
SEC22C-206ENST00000420163 LRWD1Q9UFC0 647 aa18.52■□□□□ 0.56
SEC22C-206ENST00000420163 KDM3AQ9Y4C1 1321 aa18.51■□□□□ 0.55
SEC22C-206ENST00000420163 MAFO75444 373 aaPredicted RBP18.51■□□□□ 0.55
SEC22C-206ENST00000420163 RPLP2P05387 115 aaKnown RBP18.51■□□□□ 0.55
SEC22C-206ENST00000420163 WDR5P61964 334 aaKnown RBP18.51■□□□□ 0.55
SEC22C-206ENST00000420163 DEFB103AP81534 67 aa18.51■□□□□ 0.55
SEC22C-206ENST00000420163 SF3A1Q15459 793 aaKnown RBP18.51■□□□□ 0.55
SEC22C-206ENST00000420163 ECM1Q16610 540 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms